Anas platyrhynchos (mallard): 101803813
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Entry
101803813 CDS
T02816
Symbol
SMARCAL1
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apla03036
]
101803813 (SMARCAL1)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101803813 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
OmpA
DUF7480
Methyltransf_8
DUF3084
Motif
Other DBs
NCBI-GeneID:
101803813
NCBI-ProteinID:
XP_027317207
Ensembl:
ENSAPLG00000009864
LinkDB
All DBs
Position
7:6537754..6570036
Genome browser
AA seq
974 aa
AA seq
DB search
MSSGLTEEQKKRIEENRQKALARRAERLAAQRDGQVGIAGPQVKGQSPGNWENSKQENNH
VRFISPDQRNPHSPAEQKSYLQKNYNHYSANQQMAGSHGEQQKNCSEDAKQASGIKQFPT
TIPNSLSYSHQQNSDADGQKHRQQALINLGTFQQPTCYPASKNPAEPSHPKLIDNGHPDG
IKDLQSWSKSAIKYVSAPSSATPSDSETLINRSRPTESQGGGGAFQASAKVQKLPSSAGA
GSTSEAASHKKANNVTKGKCVKYGEGRFLVEIGYNAELIAVFKKIPSKSYDPTMKKWNFS
LEDYISFMEAANRLSSVILEPLEGGENMVGLVSGSRFSDSGVDVVSLLKMCKNWKKPSAL
VKGKCVLISRFRFEVDIGYSAEVIGVFKQMNSRNYDAKTRKWNFLLEDYPKLVKMFQSLA
SVQVEPLPEAVVQTFAAQIQSSTSQTTDLPEADLSVVDSKIVTSLMPFQREGVNFAIFRN
GRLLLADDMGLGKTIQAICVAAYYRKEWPLLVVTPSSVRFTWAEAFHRWLPSLRPGSTNV
IVTGKDNLTGSLINIISFDLLSKMDKQLKNTFQVVIIDESHYLKNVKTARCRAAMPLLKA
ARRVILLSGTPAMSRPMELYTQIAAVQPDFFPQFHTFGLRYCDAKQMPWGWDYSGSSNLA
ELKILLEESIMIRRLKSDVLSQLPAKQRKMVVVSPEGINAKTKAALAVEAKKMAKGYGNK
QQEKEALLLFYNRTAEAKIHSVVEYILELLESGKDKFLVFAHHKIMLDAIVEELEKKRVE
YIRIDGSTSSAERQSLCQKFQLSEKQAVAVLSLTAANMGLTLSAADLVVFAELFWNPGVL
IQAEDRAHRIGQTSSVNVHYVVAKGTADDFLWPMIQEKIKVLGEAGLSETNFSSTAESTD
YCPKPDPKQKTIFELFQRTFSDCRDDDDELLLLEAADACCEFDSGSDFQDTKEERCSVSS
PKKRRIEESSESVT
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaggccttacagaagagcaaaagaagagaatcgaagagaaccgccagaaggcc
ttggctaggagagcagagaggctagcagcacagagagacggacaggtggggattgcagga
cctcaagtaaaaggacagagtccaggcaattgggaaaactcgaagcaagaaaacaatcat
gtcaggttcattagcccagaccaacggaatccacacagtcctgcagagcagaagagctat
cttcagaaaaattataatcattactctgcaaaccaacagatggctggttcacatggagag
caacaaaagaattgttcagaggacgctaagcaagcaagtggcattaagcagttccctacc
acgatcccaaattctctgagttattcccatcaacaaaactcagatgccgatggtcagaaa
cacagacaacaagctttaattaatcttggtacattccagcagcccacatgctacccagct
tccaaaaaccctgcagaaccatctcatcctaaattaattgataacgggcaccctgatggt
attaaagatttacaaagttggagcaaatctgccataaaatatgtttcagcgccgagcagc
gccaccccgagtgattcagaaacactgataaacagaagcagaccaacagaaagccagggg
ggaggtggtgcctttcaggccagtgctaaggtgcagaagctgcccagctctgctggtgca
ggctctacttctgaagctgcctctcacaagaaagcgaataatgttacaaaaggaaaatgt
gtgaaatacggagaaggccgtttcctggttgaaatagggtataacgctgaactcattgct
gtgtttaagaaaataccaagcaaaagctatgatcctactatgaaaaaatggaatttcagc
ctggaagattacatcagtttcatggaagcggcgaatcgactttcttcagtgattctggaa
ccactggaaggaggagaaaatatggttggcttggtatcaggctctcgtttcagtgacagt
ggggttgatgtggtgtccctcttgaagatgtgcaagaactggaagaaaccctcagccctc
gtcaaagggaagtgtgtgctgatctctcgcttccgctttgaggttgatattggatattct
gcagaagttattggagtgttcaaacagatgaattctagaaattacgatgcaaagaccaga
aagtggaatttcttgctggaggactatcccaaactggtgaaaatgttccagagcctcgcg
tctgtacaagtggagccacttcctgaggcagtagtgcagaccttcgctgctcaaattcag
agctccacgtcacagacgacagaccttcccgaggctgacctttcagtagtggactctaaa
attgtgacgagcctcatgccctttcagcgggaaggtgtgaattttgcaattttcagaaat
ggccgtttacttcttgcggacgacatgggcttgggcaagaccatccaggcgatctgcgtc
gctgcctattaccgaaaggaatggcccttgctggtggtgactccttcttctgtgaggttc
acgtgggcagaggcatttcacaggtggcttccatccttgcgtccaggtagcacgaacgtc
atcgtgactggcaaagacaacctaacagggagcttgattaacattatcagctttgatctc
ctcagcaagatggacaagcaactcaagaacactttccaagtagttattattgatgaatct
cattacctaaagaacgtaaaaactgcacgatgtcgagctgctatgcctctactcaaggcg
gccaggagagtgatcttgctttcgggaacccctgccatgtcccggcctatggagctctac
acgcagatcgcggctgtccagccagacttcttccctcagttccacaccttcgggctccgc
tactgcgatgcgaagcagatgccgtggggttgggactactctggatcatccaatttagct
gaactgaaaattttactggaagaatccatcatgatacgacgtcttaaatcagatgtgctt
tcccagcttccagcaaagcaacgcaaaatggttgtggtgtctcccgaaggcattaatgca
aagaccaaagctgccttggcagttgaagcaaagaagatggccaaaggatatggaaataaa
caacaggagaaagaagctcttctcctcttctacaacagaacagcagaagctaaaatccac
tcagtcgtagaatacatcttggagttactagaaagtggaaaagataaattcctggtgttt
gctcatcacaagataatgctggatgcaatagttgaagagctggagaagaaacgtgttgaa
tatatccgcattgatggctccacctcttcagctgagcggcagtctctgtgccagaagttc
cagttgtcagagaagcaggcggtggctgttctgtccctcactgctgcaaacatgggcctg
acgttgtctgctgcggacctggtggtgtttgcagagctcttctggaatccaggggttttg
atccaagcagaagatcgggcacatcgaattggacagaccagctctgttaacgtccactac
gtggtggctaaaggcacagcagatgacttcttatggccaatgattcaagagaaaataaaa
gtgctgggggaagctggtctttcggaaaccaacttttccagtacagctgaatccaccgat
tactgtcctaagccagatccaaagcagaagaccatctttgaacttttccagaggaccttc
tctgattgcagagatgacgatgatgaacttttgcttttggaagcagctgatgcttgctgt
gagtttgactctggcagtgactttcaagacacaaaagaagagaggtgttcagtgagttcc
cccaaaaagcggcgtattgaggagtcttctgaaagtgtaacataa
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