Anas platyrhynchos (mallard): 101803874
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Entry
101803874 CDS
T02816
Symbol
COL4A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04382
Cornified envelope formation
apla04510
Focal adhesion
apla04512
ECM-receptor interaction
apla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101803874 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101803874 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101803874 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101803874 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
apla04147
]
101803874 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
apla00536
]
101803874 (COL4A2)
Exosome [BR:
apla04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101803874 (COL4A2)
Glycosaminoglycan binding proteins [BR:
apla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101803874 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101803874
NCBI-ProteinID:
XP_027300107
Ensembl:
ENSAPLG00000009462
LinkDB
All DBs
Position
1:145931364..146067532
Genome browser
AA seq
1723 aa
AA seq
DB search
MDIAQLPSAGGLVRPDLGVALVLLEVVLSAVRVDAAMPPKRHPRGAKTYTGPCGGRDCSG
GCQCFPEKGGRGQPGLLGSQGFPGPPGLMGIPGVQGPKGHKGERGHPGISGPKGEMGLRG
VTGFPGADGVPGHPGQPGSRGKPGHDGCNGTVGDPGDSGTPGFSGFPGTIGVQGPKGQKG
EPYILPPDIASQYRGEPGDPGFSGFPGPPGILGIQGPIGPRGQRGRPGPPGPPGPQGPQG
NRGLGFYGEKGEQGPPGPPGPPGLPTKELTGVPSDKHKGERGERGQKGEPGQPGIQYAGE
RGEKGVTGFAGQRGLPGIDGSPGLIGERGFSGPDGLPGGYGPRGAKGEQGEMGPPGQSVY
IPYHIPRKGTRGEPGFPGASGLQGEPGEQGDRGLPGLPGFSDGDGDKPGLPGEMGPKGEK
GELGSPAYQSGPPGLPGRHGEPGQRGPPGPAGTPGSLFGLKGREGTPGRPGTQGYPGPRG
QKGPKGEEGDCSKCLLGEELRRGSTGPPGPPGFPGTPGQPGRKGEPGDQGQHGIPGYPGA
KGSSGQDGFPGPKGQKGDSFYITTKGTKGIRGDPGLPGIRGGDGFPGRDGLDGLPGQPGL
PGDTIRGDPGDPGYPGELGPKGFPGETGLPGEGFVGPKGYRGPPGDHGTDGSPGPPGLPG
PPGEPGQLDCGQVIEDFSRGDGTEPIWSGGGCVRPPKGSQGKPGLPGATGAKGARGFPGD
PGPMGYPGLNGTRGDPGWEGLPGPPGFTGPRGDRGLNGLPGLQGHPGLTGKPGAPGLTGQ
KGVPGEVLRATAGSRGDAGLPGFPGLKGAPGDQGVPGVRGADGSPGLPGAKGDPGLQGLP
GLMGLPGSPGTHGFPGPPGNPGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDK
GETGHPGLQGIPGVMGPPGISGMDGFPGDKGLKGSPGIDGFKGMPGLKGRPGIKGIKGEF
GSFGARGDKGAQGARGFKGDRGEQGPPGEPPKLKPSMMMEVKGEKGDVGETGTKGFFGLK
GSKGMPGLPGKTGTPGSPGHPSYVAGVKGDIGAKGTTGVKGYPGPAGSPGIRGFPGSTGG
RGDKGAPGISGHFGTPGSHGEIGEPGDTINLPGMPGLKGEVGVPGLTGLRGGPGQKGEGG
DPGIPGIEGIKGIQGVPGSLGQEGLPGLVGPPGQQGSPGTPGFQGEKGTPGWPGLPGQAG
LPGLRGISGLHGLPGTKGLPGSPGPDGYGSAGFPGTVGDKGEAGEPSRVEGSRGPPGQKG
DRGVPGIQGTFGIPGQDGFPGPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGVPAPPG
SKGESGQAGVSGQPGQKGDRGDPGLAGRPGIPGYPGPKGRKGEQGVIGFMGTVGFPGDLG
PIGPKGDRGLTGFQGPPGSPGLPPVPPRLIAEQGSPGPRGNAGPPGSPGDMGPQGPPGDP
GFRGSPGDPGLQGRGGIPAPPGSRGEQGAMGFQGPVGFEGQPGRPGSPGLPGMPGRSVSI
GYLLVKHSQSDQEPMCPIGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLY
CNPGDICYYASRNDKSYWLSTTAPLPMMPVAEEEIKPYISRCSVCEAPAVAIAVHSQEAS
IPRCPDGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYF
ANKYSFWLTTIDQPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgcgcagcttcccagcgccggtggtttggttcgtccggatctgggggtcgcg
ctggtcctgctggaggtggtgctgtcagccgtcagagtagatgctgcaatgccaccaaaa
cgccatccgaggggtgcaaagacttacacaggaccatgtggaggaagagactgcagtgga
ggatgccagtgttttcctgaaaaaggaggccgtggccagccaggactccttggatcacag
gggttccctggaccaccaggattgatggggatcccaggagtgcaaggtcccaaaggtcac
aaaggtgaaagaggacatccaggaataagtggacccaaaggagaaatggggctaagagga
gtcactggattcccaggggcagatggcgttcctggtcatccagggcagccaggatcaagg
gggaaaccgggtcatgatggctgtaacgggacagtaggtgaccctggagactcaggaact
cctggattctctggtttccctggtaccattggagtccaaggaccaaagggccagaagggg
gagccatatatactaccaccggacattgccagccaataccggggagaacctggggatcca
ggattcagtggttttccaggacctccaggtatactgggtattcaaggacctattggtcca
agaggacaacgaggaagaccaggaccaccagggcccccaggaccacaaggaccacaaggc
aacaggggccttggcttctatggagaaaaaggcgaacagggaccaccaggtccaccaggt
ccacccgggcttcctacaaaagaactgacgggtgtcccctctgacaaacacaagggtgaa
agaggagaacgagggcaaaaaggggaacctggacaaccaggtatacaatacgctggtgaa
agaggtgaaaaaggggtaacgggcttcgcaggacaaaggggactacctggtatcgatggc
tctccaggactcattggagaaagaggtttttcaggacctgatggcctaccaggtggatac
ggtcctagaggtgccaagggagagcagggcgagatgggtcctcctggacaatctgtctat
attccgtaccacattccaagaaaaggtacaagaggtgaaccaggctttccaggtgcttct
ggactacagggagaaccaggagagcaaggagatcgtgggctgcctggtcttcctggattc
tctgatggagatggggataagccaggcttacctggagaaatgggaccaaaaggtgaaaaa
ggtgaattaggatctcctgcttatcagtcaggcccacctgggttgccgggtaggcacggt
gaaccagggcagcgtggtcctcctggtcctgctggaactcccggttctctctttggacta
aaaggacgggaagggacaccaggtagacctggcacacaaggttaccctgggccaagagga
caaaaaggacccaaaggtgaagaaggggattgcagtaaatgccttctgggtgaagaactc
agaaggggctccactggcccccctggcccacctggttttccaggaacccctggccagcca
gggagaaaaggagaacctggtgatcaaggtcaacatggtattcctggctaccctggagca
aaaggatcgtcgggtcaagatggatttccaggaccaaaaggacaaaagggagactctttt
tacataactactaaaggcaccaaaggaatccgaggagaccctgggcttcctggtatcaga
gggggagatggttttccaggcagagatggattagatggtttaccaggacagcctggcctt
ccgggtgatactatcaggggcgacccaggcgatcctggttatccaggcgaattaggccca
aagggctttccaggggaaacgggtcttccaggtgaaggatttgttggtccaaaagggtac
cgtggtcctccaggtgaccatggaacagatggaagccctggacctccaggtctgcccggt
ccaccaggagagcctggccaactagactgtgggcaggtcattgaagacttttctagagga
gacggaactgaaccaatatggtcaggtgggggctgtgtaaggccaccaaaggggtcccaa
ggcaagccaggactgccaggagccacaggagctaaaggtgcaagaggattcccaggtgat
ccaggcccaatgggatacccagggctcaatggtacacgaggtgatccaggttgggaagga
ttgccaggtcctccaggttttactgggcctcggggagacaggggcctaaatggactacct
ggactacaaggacacccaggccttacaggaaagcctggtgctccaggactgacaggacag
aagggtgttcctggtgaagttttgagagcaacagcaggttctcgaggggatgctgggctg
cctggcttccctggcttgaaaggcgcacctggagatcaaggagtaccaggagttagagga
gcggatggtagcccaggtttgccaggagccaaaggcgatccagggctgcagggtctccct
ggtctgatgggtttgccaggatcaccaggaacacacggattcccaggcccaccagggaac
cccgggccagacggaggacctgggtctcaaggaccccttggtccaccaggtgcaagggga
gaagatggtgagcaaggttttcctggtcccgtgggcctgaaaggtctgtctggtgacaaa
ggtgaaacggggcacccaggattgcaaggtatacctggcgtgatgggtccccctggcatc
agtggaatggatggatttccaggagataaaggtctaaaaggttcacctggcattgatggt
ttcaaaggcatgccaggcctgaaaggaagaccaggaatcaaaggaatcaaaggagaattt
ggttcattcggggctcggggtgataaaggcgcacagggcgcacgaggctttaaaggtgac
cgtggggaacagggtcccccaggagagcccccaaagcttaagcctagcatgatgatggaa
gttaaaggtgaaaaaggagatgttggagaaaccggcaccaagggattctttggcttgaaa
ggtagcaagggaatgccaggcctccccggtaagacaggaactcccgggtctccggggcac
cccagttacgtggctggtgtgaagggggacattggtgcaaaaggaacaacaggtgtgaaa
gggtatcctggtcctgctggctctcctggcatcagaggcttccctggcagcacaggaggc
aggggagataagggtgccccgggaatttcaggccattttggtactcctggctcccatggt
gaaataggtgagccgggagatactataaacttaccaggaatgcccggtcttaaaggggaa
gtcggtgtgccaggcctaacaggcttaagaggaggcccaggacaaaaaggtgaagggggt
gaccctggtatccctggcattgagggcatcaagggcatacagggtgtccctggctccttg
ggacaagaaggtttgccaggactggttggccccccagggcagcaaggaagccctgggaca
cctggatttcaaggtgaaaagggaactcccggctggcctggcttacctggacaagcaggc
ttgcctggcttgagaggaatcagtggactgcacggcttaccgggcactaaggggctgcca
ggatcaccaggtccggatggctacggctctgcaggcttcccaggcaccgtgggtgacaaa
ggagaagcaggagagccaagcagagtggaaggtagccgaggccctccgggtcagaaggga
gacagaggtgttccagggatccaaggaacctttggcattcctgggcaggatggatttcca
gggcctcctgggatttcaaatatatcaggatatcctggtgataaaggttccccaggtctg
gacggagtgccaggctatccaggactacaggggcagcctggagtaccagctccacctgga
agcaaaggagaaagtgggcaagcaggtgtgagcggacaacctggccaaaaaggagataga
ggtgatcctggattagcagggagacctggaattcccgggtaccctggaccaaaaggtcgc
aagggtgagcaaggtgtcatcggctttatgggcacagtaggatttccaggtgatctggga
cccatcggacccaagggggacagaggactaactggctttcagggccctccaggctctcct
gggctgccgcctgttcctccaaggctgattgctgagcaaggatcaccaggtccccgtgga
aatgcaggacctccgggaagcccaggagatatgggccctcagggtccaccaggcgatcca
ggtttcagaggctcacctggagacccagggctccagggcagaggtggcattccagctcct
cctggatccagaggtgaacaaggagcaatggggtttcaaggtccagtgggatttgaaggc
cagccaggccgccctggtagccctgggctgccaggcatgccgggtcgcagcgtcagcatc
ggctacctgctggtgaagcacagccagtccgaccaagagcccatgtgtcccatcggcatg
aacaaactctggagtgggtacagcctcctgtacttcgaaggacaagagaaagcacacaac
caggacctagggctggccggctcatgcttggctcgtttcagtacgatgccattcctctac
tgtaaccccggggatatttgttactatgcaagtcgaaatgataaatcctactggctctcg
actacagcacctctcccaatgatgcctgtggcagaagaagaaattaagccatatatcagc
cgctgctcagtctgtgaggccccagctgtggcgattgctgtccatagccaagaagcttct
attcctcgctgccctgacggctggcgcagtttgtggattggatattccttcctcatgcac
actgcggctggtgatgaaggtggaggacagtcgctggtttctcctgggagctgcctggaa
gatttcagagctactcctttcatcgaatgcaacggcgcacgcggaacctgtcattacttt
gcaaataaatacagcttctggctcactacgattgaccaacccttccaaagcaagccctca
gcagatacactcaaggcaggactcatccgaagccatatcagcagatgccaagtctgtatg
aaaaatttatag
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