Anas platyrhynchos (mallard): 101804142
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Entry
101804142 CDS
T02816
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
apla
Anas platyrhynchos (mallard)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
101804142
NCBI-ProteinID:
XP_027316284
Ensembl:
ENSAPLG00000002846
UniProt:
R0LX92
LinkDB
All DBs
Position
6:27362049..27425947
Genome browser
AA seq
582 aa
AA seq
DB search
MSSNLGKEKDCKEKDPKVPSSKEREKEAKASGGFGKDSKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPAVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaacctgggaaaagaaaaggactgtaaagagaaggatccaaaagtcccgtcg
tcaaaagaaagggagaaggaggccaaagcctccggaggatttgggaaagacagcaaagag
aaggagcctaagaccaaagggaaagatgccaaagacggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacgataaaaagacctaacccagccacaggt
acccgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattcgatgcgcttggacttgtccaagaggtctatacacatgcttccatccgctatcaaa
gagttaacgcagttaacagaactttatttatacagtaacaaactgcagtctctaccagca
gaggtgggctgtctggtgaacctgatgacactggccctgagtgaaaactcactcaccagc
ctgcccgactctctggataacttgaagaagctgcgcatgcttgacctgcggcacaacaag
ctgcgagagatcccggcggtggtgtacaggctgagctctctcgccactctttacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaagctcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagctgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacaccttccagaagagattggaagttgc
acacagatcaccaaccttgacttgcagcacaatgagcttttggacctgccagaaaccata
ggaaatctgtctagtctaagtcgtcttggcctgaggtacaataggctgtcagcaattccg
aagtctttagcaaaatgcagtgaacttgatgagctgaatctggagaacaacaacatttct
actttaccagagggtcttttatccagccttgtcaaactgactagtttaacgctggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aacatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacctctctcccgctggactttggaact
tggactagtatggtagaactgaacttagcaactaaccagctcacaaaaatccctgaggat
gtgtctgggcttgtttctcttgaggttcttatattgtcaaacaatctcctaaaaaagctt
ccccatggaattggaaatctaaggaaactccgagagttggatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaat
aatcagttgaccacccttccaagaggtattggtcaccttaccaatctaacacaccttggg
cttggagagaatcttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccgctcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccataccgtgcc
atggtctga
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