Anas platyrhynchos (mallard): 101804356
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Entry
101804356 CDS
T02816
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X2
KO
K06636
structural maintenance of chromosome 1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04110
Cell cycle
apla04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101804356 (SMC1B)
04114 Oocyte meiosis
101804356 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apla03036
]
101804356 (SMC1B)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101804356 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
101804356 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
101804356
NCBI-ProteinID:
XP_012956650
Ensembl:
ENSAPLG00000008824
LinkDB
All DBs
Position
1:71723200..71759019
Genome browser
AA seq
1228 aa
AA seq
DB search
MGYLKLLVMKDFKSWRGEQVIGPFMRFNCIIGPNGAGKSNIMDAVSFVMCEKISNLRVKS
VRELIHGAHVGKPVSSTASVKIVYCEEDGEEKTFSRVIRDSCSEFIFNDKTVTRSTYISE
LEKIGILVKARNCLIFQGTVELIAMKKPKERTQLFEQISNSWQYAEEYERKKKKMEQAEE
DAHFNYNKKKSIAAERKQAKMEKEEADHYQMLIKEMHENRIQLQLFQLYYNEKNIDFMKK
SLDEKNMEASIKKDSLATAENEFRAKKKVLGVLNRDQQRLEGEMKTLQVSLVQHRALYIK
AKENTSYQIKKIEMSKKFLRDKEKYCDKEKQNIKDLEIELYETEKAWREFEKKTKEEILQ
RAVDIELRESQLERYKELKEIARRKVATLTQQLEKLWWEQKADQERMKLNRRKKKEIEEN
IKQTVEQIEEHKRRIEKLEEYTKLCIESLAEKKRQEETLTKEIENSTIRMAEVNEELNKI
VGELQNAKIDYHEGKRQQMRAELLESLRRLYPDSVFGRLLDLCHPIHKKYQLAVTKVFSK
YMTAIVVATEKTARDCIRFLKQERAEPETFLALDYLDVKPINEKLREIKGAKMLVDVVQT
PFDPLKKVIQFVSGNGLVCETVKEARQIAFDGPVRLKTVALDGTLFLKSGVISGGSSDLR
FKARCWDDKEMNKMKERRESLINELKDLMKIKRKETDLKHLHAQCHGTQTRLKYSQSELD
LIKKKHLANLYMEKSKLESELVNTESQHDMINEGVLQRELKIKEFQKKINEAEDAVFKEF
CEEIGIENIRVYEQEHVRQQEEIDRRRLEFENQKMRLNVQLEYNRGHLQKLIDTVSKLRE
TIQKDELETTGLFKDEEKHLKRVNEIVEEEQHLKDTLSAHKSEIMKTQSEVEEFRKKLLT
LNREAAKLQKEAAAIETSLEDKRLRRHNMLLECKVQDLKINLLFGSLDDISEIELGTEME
GTQTTTIYEREEAIKIDYSSLASDLKDLESDEEREAHLNQMQQEMKSKESTLMKTAAPNL
RALEKLQIARDKFQESMNAFETSRKEARISKQEFEQVKKRRYELFSRCFEHASIAIDQIY
KKLCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVAALALIFAIH
SFRPAPFFILDEIDAALDNTNIDKVSSFIREQAHEQFQMIVISLKEEFYSKADALIGVCP
EHDNGMFSQVLTLDLTEYPDDQEEMESL
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgggctacctgaagctgctggtgatgaaggacttcaagtcctggcggggggagcaggtc
attggccccttcatgaggttcaactgcatcatcgggcccaacggagcaggaaaatctaac
ataatggatgctgttagttttgttatgtgtgaaaagatatctaacttgcgagttaaaagt
gttcgagaacttattcatggagcgcatgttggaaaaccagtttcttctacagcaagcgta
aagatagtatattgtgaagaagatggggaagaaaaaacattttcaagagttatccgtgat
agttgttctgaatttattttcaatgataaaacagtcacccgatctacttacatatctgag
cttgaaaaaataggcatacttgtcaaagctaggaattgtcttatttttcagggaacagta
gaactgattgcaatgaagaagccaaaggaaagaactcaactttttgaacaaatcagtaat
tcatggcaatatgctgaggaatatgaaagaaaaaagaaaaaaatggagcaagcagaagag
gatgcacactttaattataacaagaaaaaaagtattgcagcagaacgcaaacaagcaaag
atggaaaaagaggaggcagatcattaccagatgctcatcaaggaaatgcatgaaaacagg
atacagctacagcttttccagctttattacaatgaaaaaaacattgactttatgaaaaaa
agtttggatgaaaagaatatggaggctagtatcaagaaagattctcttgctacagcagaa
aatgaatttagagccaagaaaaaagtgcttggtgtactaaatagagaccaacagcgcttg
gaaggagaaatgaagactcttcaagtgtcactggttcagcatagagccctctatataaaa
gcaaaagaaaacacctcctaccaaatcaagaaaatagaaatgtctaaaaaatttctgagg
gacaaggagaaatactgtgataaggaaaagcagaacataaaagacctggagatagaactg
tatgaaactgagaaggcgtggagagaatttgagaagaaaactaaagaggagatattgcag
agagcagtagatattgagctgagagaaagtcagttggagcgctataaagagctaaaggaa
atagcaagaaggaaagtggctacgctaacccagcagttagaaaaactttggtgggagcaa
aaagcggatcaagaaaggatgaaacttaacaggagaaagaaaaaagaaattgaggaaaac
attaaacagactgtggaacagatagaagagcataaaagacgaatagagaagttggaagag
tacaccaagttatgcattgagtcactggcagagaaaaaacgtcaggaagaaacacttact
aaggaaatagaaaactcaacaatacgaatggctgaagtgaatgaagaattgaacaaaata
gttggtgaactgcagaatgccaaaatcgattaccacgaaggaaagcgtcagcaaatgaga
gcagagttgctggaaagtctcagaagactgtatccagattctgtgtttggaagactgctt
gacttgtgccaccctattcataaaaaataccagcttgctgtcaccaaagtgttcagcaaa
tacatgactgctattgttgttgccacagaaaaaacagcaagagattgcattcggttccta
aaacaagaacgagctgaacccgaaacttttcttgctttggattaccttgatgttaagcca
attaatgagaagttaagagagataaaaggagctaaaatgctggtggatgttgtacaaact
ccatttgatccactgaaaaaagtaattcagtttgtgagtgggaatggcttggtctgtgaa
acagttaaagaagcaagacaaatagcatttgatggaccagtgaggttgaaaacagtggcg
cttgatggaactttatttttgaaatctggagtgatttctggaggatcaagcgatttaaga
ttcaaagccagatgttgggatgataaagaaatgaataaaatgaaagaaagaagagagagc
ttgattaatgagttaaaggacttaatgaaaatcaaacgtaaggagactgatttgaagcac
ttgcatgctcaatgtcacggaactcagacgcgacttaaatattcacagagtgaattagac
cttattaaaaagaaacatcttgctaatctctacatggagaaatcgaagctggaaagtgaa
ctagtaaatactgagtcccagcatgatatgataaatgaaggagtactacagagagaatta
aaaataaaagaatttcagaagaaaatcaatgaggctgaagatgctgttttcaaggaattc
tgtgaagaaattggcatagaaaatatacgtgtgtatgaacaagaacatgtgagacagcaa
gaggagattgataggagaagactggagtttgaaaatcagaagatgcgactaaatgttcag
ctggaatataatcgtggtcatctacagaaattaatagacacagtcagcaagctgagggaa
acaattcaaaaggatgaattggagactactgggctattcaaggatgaggaaaaacatcta
aaaagagtgaacgaaattgtggaggaggagcaacatcttaaggatacattaagtgctcat
aaatctgagattatgaaaacccaaagtgaagttgaagaattcagaaagaagttgttaact
cttaatagggaagctgcaaaattacaaaaggaagctgcagctatagaaacctcattggaa
gataaaagattaagaagacataatatgcttcttgagtgcaaggtgcaggacttgaaaata
aatctcctatttggatcactggatgatatcagtgaaatagagctgggaactgaaatggaa
ggcactcagactacaactatctatgagagggaagaggcaattaagatagactacagtagc
ctagcaagtgacctgaaggacctggagtctgatgaagaaagagaggcgcatctgaaccaa
atgcagcaggaaatgaaatctaaagagagtactttaatgaagacagctgctccaaacctg
agagcattggagaaattacagatagctcgggacaagttccaagaatcaatgaatgctttt
gagaccagcagaaaggaggccagaatatccaaacaagaatttgaacaggtgaagaaaagg
agatacgagctttttagccggtgctttgagcatgcctccatagctattgatcagatctac
aaaaaactttgcaggaacagtagtgctcaggcattccttagtcctgaaaatcccgaggag
ccttacctagaaggcattggctttaactgtgtggctccagggaagcgatttatgccaatg
gacagtttgtcaggaggagaaaaaactgtggcagctctggctcttatatttgctatacac
agttttcggccagcacctttttttattttagatgagatagatgctgccctggataacaca
aacattgataaagtatcaagtttcattagggagcaggcacatgaacagtttcaaatgata
gttatttctctgaaggaagagttttattccaaagcagatgcattgattggagtgtgtcca
gagcatgataatggtatgttcagtcaggtactgactttggatcttaccgagtatccagat
gaccaagaagaaatggagtctttataa
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