Anas platyrhynchos (mallard): 101804378
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Entry
101804378 CDS
T02816
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101804378 (TNRC6C)
03036 Chromosome and associated proteins [BR:
apla03036
]
101804378 (TNRC6C)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101804378 (TNRC6C)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101804378 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
DUF4718
THOC7
Motif
Other DBs
NCBI-GeneID:
101804378
NCBI-ProteinID:
XP_038021121
Ensembl:
ENSAPLG00000005456
LinkDB
All DBs
Position
19:7956051..8057103
Genome browser
AA seq
1945 aa
AA seq
DB search
MEEKKKKKQEEKKKKEGAQKKAAEQKTKVPEPIKTSLSQPQPAGTGTSTSTSTITNSSNG
KRASANGQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPPGTLTGTSPAQGTGQAGASP
PPQQGAGGQHHPSKTQADLSHSGLGDHYENSHWGQQPTFRSEGNCSWDKVIIDRTDKEAW
PSITGAETESASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGANGALVQS
TSNQSALGAGGANGNGNSARVWGVAAGSGSGLAHCSASGGDGKMDNMIGDGRSQNCWGAS
NSNAGINLNLNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMGNQNGNPTGTLGA
WGNLLPQESTEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGM
AVGMGAIIPPHLQGLPGANGTSVSQVSGGSGEGMGSSVWGMSPSNPATGNSNSGFSQGNG
DTVNSALSAKQNGSSSAVQKEGNGASAWDSGPPSGPGVLAWGRGGGNSGVGSMHSGAWGH
PNRNASNGVNGEWGKPPNQHSNSDINGKGSTGWDGSSVTSPNPAMQQGNEQMNSWAKAAA
SGTTASEGSNDSGGSQNEGSTGREGAGEGRRRDKGMIDQGQVQLPRNDLDPRVLSNTGWG
QTPVKQNTAWEFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMNSTNTSSVSGWV
NSPPAAVPTNTGWGDSNNKAPNGPGGWGESASSTTVNNAAAAKSGHAWSGTANQEDKSPT
WGEPQKPKTQNWGDGQKSNPSWTSGGGDWTDSSSVPGHLGDGKKNGSGWDSDNRSGSGWN
DSTRSGTSGWGNGTNSKANTGTSWGESLKPGPQQNWANKPQDNNVSNWGGAASVKQTGSG
WVGGPVPAKQKENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNPI
IQSSTTTNTTTTSTIINTNMVEPQPSHQSSAQPNRSPLLGPGKKKKKKTSGKKRLFVRAG
WGEMPNVHTKTEASWGEPSSPSAAVDNGTSAWGKPPSSGTGWGDNPAESAGTYGRTNAPA
AAPALCKPASKSMQEGWGSGGDEVNLSTSQWEDEEGDMWNNTASQESSSSCNSWGNAPKK
GLQKGMKTSSKQDEAWIMNRLIKQLTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVEM
DKRGMGVTDYNGMVTKPLGCRPPPISKESSMDRPTFLDKDGGLVEEPTTSPFLPSPSLKL
PLSNSALPNQTLGGIASGLGMQNLNSSRQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPL
NSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAY
QRLQIQQQMLQAQRNVSGPMRQQEQQVARTINNMQQQIQQHQRQLAQALLMKQQPPPPHL
SLHPSAGKSAMDSFSPHPQAPGLPDLQTKEQQSSPNTFAPYPLAGLNPNMNVNNMDITGG
LSVKDTSQSQSRLPQWTHPNSMDNLSSAASSLDQNSSKHGAIPGGLSIGPPGKSSIDDSY
GRYDLIQNSESPASPPVAVPHSWSRAKTDSDKISNGSSINWPPEFHPGVPWKGLQNIDPE
NDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGSSPTSSQNATLPSSSAWPLSASGYSSSF
SSIASAPSIAGKLSDIKSTWSSGPISHTQASLSHELWKVPRNTTAPTRPPPGLTNTKPSS
TWGASPLGWTSSYSSGSAWSTDSSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHL
NLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQPLPPTSSW
QSNTGSNQTRLGSAGGSHGLVRGDAGHWNSPCLGGKGSSDLLWGGVPQYSSSLWGPPSTD
DGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaaggtgctcagaaa
aaggctgctgaacaaaaaaccaaagtgccagaacctattaagaccagtttaagccagccc
caacctgccggtaccggtaccagtacttccaccagcactattaccaacagcagcaatggc
aagcgtgcatctgctaatgggcagcagccagctgcgtcccgttacctgcctcgcgaggtg
cctccacgcttccgccagcaagaacagaagcagctcctaaagagagggcagccactgcct
cctggcactctgactggcaccagcccagcgcaaggtaccggacaagcaggggcgagtcct
cctccgcagcagggagcaggaggacagcatcatcccagtaagacccaagcagatctcagt
cacagtggattgggagaccattatgaaaattcccactggggacagcagcccactttcagg
agtgaaggcaactgcagctgggataaagtgataatagacaggactgacaaggaagcgtgg
ccttccatcacaggagctgagactgaatctgcctcagaatgtactacagacactgactct
gcctccaactgtggctcagagaacagtagcatggctacagggagtgcccaaggcaacttc
actggacatacaaagaaaactaatggcaataatggcgccaacggagcactcgtccaaagc
acttctaaccagagtgcccttggagctggtggagcaaacggtaacggaaactcggccagg
gtgtggggggtggctgcaggctccggctctggcctagctcactgctctgccagcggtggg
gatggaaagatggacaacatgattggagacggtagaagtcaaaactgctggggtgcttcc
aactcaaatgctggcattaatcttaaccttaaccctaatgccaatccagctgcctggcct
gtactcggacatgaaggaactgtgggagcaggcaacccttccagtatttgcagtccagtc
agtgccataggtcagaacatgggcaaccagaatgggaacccaacaggcaccttaggtgct
tggggaaacttgctgccgcaagagagcacagaaccacaaacgtccacttctcagaatgtg
tctttcagcgtacaacctcagaaccttaacactgatggaccaaataacactaaccccatg
aactcttcaccaaaccctatcaatgcaatgcagacaaatggactgccgaactgggggatg
gctgttggtatgggggccatcatcccgccccacctgcaaggccttcctggtgctaatgga
acatcagtttctcaagtcagtgggggcagtggtgaaggaatgggcagttcagtatggggg
atgtcccccagtaatcctgccacaggaaacagcaattctgggttcagtcaggggaatgga
gacactgtgaactcagcattaagtgctaaacaaaatggatccagcagtgctgtgcaaaag
gaaggaaacggagcgagtgcgtgggattcggggcctccttctggccctggggtactagcg
tggggcaggggcggtggcaacagcggtgttggtagcatgcattctggagcttggggccac
cccaaccgtaacgccagtaacggtgtaaacggtgaatggggcaagcccccaaaccagcat
tccaatagtgacatcaacgggaaaggatcaacggggtgggatggctcaagtgttaccagt
ccgaatcctgccatgcagcagggcaatgaacaaatgaactcttgggccaaagctgcagca
tctggcaccacagctagcgaaggaagtaacgatagcggtggaagtcaaaatgaaggcagt
actgggagggagggggctggagaaggcaggaggagagataaagggatgatagaccaaggg
caagttcagttgccaagaaatgaccttgaccccagggtcctgtccaatacagggtgggga
cagacccctgtaaagcaaaacactgcctgggaatttgaagagtccccaaggtctgaacga
aagaatgacaatggaacggaggcctggggttgtgcagctactcaatcttcaaactcaggg
gggaagaacgatgggtccatcatgaacagtacaaatacctcttcagtatctgggtgggtc
aactctccacctgcagctgttccaacaaatacaggttggggagacagtaacaacaaagca
ccaaatggcccagggggatggggagagtcagcaagctctactactgttaataatgctgct
gctgccaaaagcggccacgcttggagtgggaccgcaaatcaggaggacaaatcacctacc
tggggtgaacctcagaaacccaaaactcaaaactggggagatggacagaaatcaaatcca
agctggacttcaggaggtggagattggacagattcgtcatctgttcctggacacttgggt
gatgggaagaagaatggatctggatgggactctgacaataggtcagggtctggttggaat
gattccacgaggtctgggaccagtgggtggggaaatggcacaaacagcaaggcaaataca
ggtacaagttggggggaatcgttaaagccaggcccccaacaaaattgggctaacaaaccc
caggacaacaatgtgagtaactggggaggagctgcttctgtaaaacagacggggtcgggg
tgggttggtgggccggtgccagccaaacaaaaagagaactgtgaggcaactggctgggaa
gagccatctccaccgtccattcgccgcaagatggaaatcgatgatggtacctcagcttgg
ggcgacccaaattacaacaacaacaagactgtaaacatgtgggatagaaataatcctata
attcagagcagtaccacaaccaataccaccaccactagcaccattatcaacacaaacatg
gttgaacctcagccatcgcaccagtcaagtgcccagccgaaccggtccccgctgcttggt
ccaggaaaaaagaaaaagaaaaaaacttcaggaaaaaaaagactttttgtaagagcaggc
tggggagaaatgcctaacgtccacacaaagaccgaagcttcttggggagagccgtcatcc
ccttctgctgcagttgataatggcacttcagcgtgggggaagccccccagcagtggtaca
gggtggggagataatcctgccgagtcggcagggacatacggaagaacaaatgctccagct
gctgccccagcactgtgcaaaccagcttcaaaatctatgcaagaaggctggggcagtggt
ggggatgaagtgaatctcagtactagtcagtgggaagatgaagaaggagatatgtggaat
aatactgcttcacaagagagcagctcctcctgtaactcctgggggaatgccccaaagaaa
ggacttcaaaagggcatgaagacatctagcaagcaagatgaggcctggatcatgaaccgc
ctgataaaacagctcacagacatgggcttccctagagagccagcggaagaggccttgaag
agcaacaatatgaatctcgatcaggccatgagtgctctgctggaaaagaaggtggaaatg
gacaagcgtggaatgggagtgaccgactataatggaatggtcaccaaaccccttggctgc
cgcccaccaccaatctccaaagagtcttccatggaccgccccaccttccttgacaaggat
ggcggcctagtggaagagcccactacttcaccatttttgccttcaccaagcctgaagctc
cccctttcaaacagtgcactccctaatcagaccctgggcgggattgcctcagggctgggc
atgcaaaacttgaattcttctcgacagataccgagtggcaatctgggtatgtttggcaat
agcggagcagcacaagccaggaccatgcaacagccgcagcaaccgccagtgcaacctctt
aattcatcccagcctagtcttcgtgctcaagtgcctcagtttctatcccctcaggttcaa
gcacagcttttgcagtttgcagcaaaaaacattggtctcaaccctgcactattaacctcg
ccaattaatcctcagcatatgacgatgttgaaccagctctatcagctgcagctggcgtac
caacgtttacaaatccagcagcagatgttacaggctcagcgtaatgtttccggacccatg
agacaacaggagcagcaagttgcacgtacaatcaataacatgcagcagcagatccagcag
caccagcgccagctggcccaggccctgcttatgaagcagcagcctccccctccacatcta
tctttgcacccctctgcaggcaaatcagccatggatagcttttcaccccatccccaggct
cccggccttcctgacctgcagaccaaagagcaacagtcttcaccgaacacctttgctcct
taccctcttgctggactgaacccgaacatgaatgtaaataacatggacattactggtggt
ttgtcagtgaaggacacttctcagtcccagtctcgccttcctcagtggacacaccccaac
tcaatggataatctgtctagtgctgcttcttctcttgaccagaactccagcaagcacggt
gctatacctggaggtttaagtattggtcctccgggaaagtcctccattgatgactcttac
ggccggtatgatctgattcaaaacagtgaatcgcctgccagtccacccgtagctgttcct
cacagctggtcacgtgccaaaactgatagtgataaaatttccaatggctccagcataaac
tggccaccagaatttcatccaggagtgccatggaaaggactgcagaatattgatcctgaa
aatgaccctgatgttactcctggaagtgttccaactgggcctaccataaacaccacaata
caggatgttaatcgctatcttctcaagagtggagggtcatccccaacatcatctcagaat
gccacgctgccttcatcgagtgcctggccgcttagtgcctccggctacagtagctctttc
agcagcattgcatccgcacctagcattgcaggtaaattgtcagacatcaagtctacgtgg
tcctctggcccaatctctcacacacaagcctctttatcccatgaactgtggaaggtaccc
agaaacactactgctcctacaagacctcctccaggcttaacaaacaccaagccatcgtct
acatggggtgccagtcccctgggttggaccagctcttactcctctggttcagcatggagt
actgacagctcagggagaacaagcagctggctggttcttcgaaacctcacaccccagatt
gatggttccacactgcggacactgtgtttgcagcatggccctctaataacattccacctg
aacctgacacaagggaatgctgtggtccgatacagttccaaggaagaagcagccaaggcc
caaaagtctctgcatatgtgtgtcctgggaaacactaccatcttggccgagtttgctggt
gaagaggaagtaaaccgtttcttagcacaaggccagcccctgccgcccacctccagctgg
cagtccaacactggaagcaaccagacgcgcctgggctcggcgggcggctcgcacggcttg
gtgcgcggcgacgccggccactggaacagcccctgcctggggggcaagggcagcagcgac
ctgctgtggggtggggtgccccagtactccagcagcctctggggaccccccagcaccgac
gacggccgagttatcgggagccccacacctctgaatactcttcttccaggtgaccttctc
agtggggagtccatctag
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integrated database retrieval system
