Anas platyrhynchos (mallard): 101804383
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Entry
101804383 CDS
T02816
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apla03036
]
101804383 (DICER1)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101804383 (DICER1)
microRNA pathway
RISC loading complex
101804383 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
ResIII
DEAD
Helicase_C
Cas3-like_C_2
Amidoligase_2
Motif
Other DBs
NCBI-GeneID:
101804383
NCBI-ProteinID:
XP_038036674
Ensembl:
ENSAPLG00000012407
UniProt:
A0A8B9ZCP9
LinkDB
All DBs
Position
5:15773549..15842636
Genome browser
AA seq
1921 aa
AA seq
DB search
MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGRRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEYLSLSNINLLVFDECHLA
IQDHPYREIMKICENYPSCPRILGLTASILNGKCDPAELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPYTDKSGLYGRLLKELDEALHFLNDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDAGETE
TEPIVDDDDVFPPYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD
HTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTEADSAYCVLPLNVVDDSSTLDIDFKFMEDI
EKSEARTGIPSTQYTKEMPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGV
GVKSLPADFRYPNLDFGWKKSIDSKSFISIPSSSLVENENYCKHSTIVVPENAAHQGANR
TSSAEKHDQMSVNYRTLLDESPSKLQIDVSAELAAINGVSYNKNLANGNCDLVNRDFCQG
NQLNYCRQEIPVQPTTSYPIQNLYSSENQPKPSNECTLLSNKYLDGNANRSTSDGCPKMA
VTTSTSTALHLSKDRVDSEKNPSSGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYIVNQDKSNTDKWEKDDVTKENLLANGKLEDYDDDEEDEDLMWRLPKEEPDFEDD
FLEYDQEHIKFIDNMLMGSGAFVKKISLSHFSTTDSNYEWKAPKKSSLGNVQFSSDFDDF
DYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDAGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWESTLCATGENCNSEQKNLSPNS
VSASVANSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPN
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaatccctcagcatggcgggactgcagctcatgacccctgct
tcctccccaatgggtcctttttttggactaccatggcaacaagaagcaattcatgataac
atttacacgccaagaaaatatcaggttgaactgcttgaagcagctttggatcataataca
atagtctgtttaaacactggctcagggaagacttttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagatttcaacaaaaacggaagaagaactgtgttcttggtc
aactcagcaaatcaagttgctcaacaagtgtcagctgtcaggacacattcagatcttaaa
gtgggagagtattcaagtttagaggtaactgaatcatggacaaaagagaaatggagtcag
gaattctctaagcatcaggttctggttatgacatgtcatgttgctttgactgttctgaga
aatgaatatttatccctgtcaaatattaatcttctggtgtttgatgagtgccatcttgca
atccaggaccacccataccgtgaaattatgaagatctgtgagaattacccatcatgtcct
cgaatcctgggattaacagcttccattttaaatgggaaatgtgatcctgctgagttagag
gagaagatccagaaactggagaaaatactaaagagcaatgctgaaactgcaactgatttg
gtggtcttagacagatatacttctcagccatgtgagattgttgtagactgtggaccatat
actgacaaaagtgggttgtatggaagattattaaaggaattggatgaagcgcttcatttt
ctaaatgactgcaacatatctgtacattcaaaggaaagagattctacattaatttcaaaa
cagatattgtcagactgtcgagctgtgttggttgttctgggaccctggtgtgcagataag
gtagctgggatgatggtgagagagctacagaagtatatcaaacatgaacaagaggagctg
cacaggaaatttttattgtttacagacactttcctaaggaaaatacatgcactctgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaaccccaaaagtaataaagctg
cttgaaatcttgcgcaaatacaaaccatatgaacggcagcagtttgaaagcgttgaatgg
tataacaataggaatcaggataattatgtgtcttggagtgattctgaagatgatgatgag
gatgaagaaattgaggagaaagagaagccagagactaatttcccatctccttttactaat
attttatgtggaattatttttgtggaaagaagatacacagcagttgttctaaataggttg
ataaaagaagctggtaaacaagatccagaactggcttacatcagtagcaattttataact
ggacatggcattggcaagaatcagcctcgtaacaagcagatggaagtagaattcagaaaa
caggaagaggttcttagaaaatttcgagcacatgagaccaacctacttattgctactagt
attgtagaagagggtgttgacataccaaaatgcaacttggtggtgcgttttgatttgccc
acagaataccgttcttatgttcagtcaaaaggaagagctagagcaccaatttccaattac
ataatgttagctgatacagacaaaattaaaagttttgaagaagatcttaagacatataaa
gcaattgagaagatcctgagaaacaaatgctcaaaatctgttgatgctggtgaaactgaa
actgaacccattgttgatgatgatgatgtatttccaccctatgtgttgaggccagatgag
aacagtccaagagttactattaacactgcaattggacacataaataggtactgcgctaga
ttaccaagcgatccatttacacacctagctcccaagtgtaaaacccgagaactacctgat
catacattttactctactctctacctgccaatcaactcacctcttcgagcttcaattgtt
ggtcctccaatgagttgtgcaagattggctgagagagttgtagctcttatttgctgtgaa
aaactgcacaaaattggtgaactggatgatcatttgatgccagttgggaaagaaacggtt
aaatatgaggaagagcttgatttacatgatgaagaagaaaccagtgttccaggaaggcca
ggctctacaaaaagaagacaatgctaccctaaagctattccagaatgtttgagagatagt
tatcccaagcccgatcagccctgttacctgtatgtgataggaatggtgttaactactcca
ttgcctgatgagctcaacttcaggagacgaaagctatatcctcctgaggatacgacaaga
tgttttggcatattgacagccaaacctatacctcagattcctcactttcctgtgtatact
cgctctggagaggttacaatatctattgagcttaagaaatctggttttactctgtctctg
caaatgcttgagctgataacacgactccaccagtacattttttcacatattcttcgtctt
gagaaacctgcactagagttcaaacccacagaagctgattcagcctattgtgttctacct
cttaatgttgttgatgactccagcactttggacattgactttaagtttatggaagacatt
gaaaagtctgaagcacgtacaggcattcccagtacacaatatacaaaagaaatgcctttc
attttcaagttagaagattaccaggatgcagttatcattccacggtatcgaaattttgat
cagcctcatcgattctatgtagctgatgtatacactgatcttactccactcagtaaattc
ccttcccctgaatatgaaacttttgctgaatattataaaacaaaatataatcttgacctg
accaatcttaaccagccgctgctggatgtggaccacacatcttcaagacttaatcttttg
actcctcgccatttgaatcagaagggaaaagcacttccactgagcagtgctgagaagagg
aaagcaaaatgggaaagtctgcagaataagcagatactggttccagagctctgtgctata
catcctattccagcatcactgtggagaaaagcagtttgcctccccagcatactttatcgc
ctgcactgccttttgacagcagaggaactaagagctcaaacagccactgatgctggtgta
ggggttaaatcacttcctgcagatttcagataccctaacttggacttcggatggaaaaaa
tctattgacagcaaatccttcatctctatacctagctcctctttggtagagaatgaaaat
tactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggtgctaataga
acctcttctgcagaaaaacatgaccaaatgtctgtgaattacagaacactgctcgatgag
tcacccagtaaactccaaattgatgtctcggcagaacttgcagcaattaatggtgtttct
tataataaaaaccttgccaatggcaattgtgatttagttaacagagacttttgccaagga
aatcagctgaattactgcaggcaggaaattcctgtacaaccaactacctcatatcccatt
cagaatttatacagcagtgagaaccagcccaagcccagcaatgaatgtactctactgagt
aataaataccttgatggaaatgctaacagatctacctcagatggatgccccaaaatggca
gtgaccaccagtacttcaacagctcttcatctttcaaaagacagagtggattctgaaaag
aacccttctagtgggtactcctcaaaaactcttggtcctaatcctggtctcattcttcaa
gctttgactctttcgaatgctagtgatggatttaatctggagcggctagaaatgcttggt
gattcatttttaaagcatgccatcactacatacttgttttgcacttaccctgatgcacat
gagggacggctgtcatacatgagaagcaaaaaagtcagcaactgtaacttgtatcgcctt
ggaaaaaagaaaggactgcctagtcgtatggtggtgtcgatatttgatccccctgtcaat
tggcttcctcctggttacatagtgaatcaggacaagagcaacactgataaatgggagaaa
gatgatgtgacaaaggagaatttgttggccaatggtaaacttgaggattatgatgatgat
gaagaggatgaagacctaatgtggaggttacccaaggaagaaccagactttgaagatgat
tttttggagtatgatcaggagcatatcaaattcatcgataatatgttaatgggatcaggg
gcttttgtgaagaaaatttctctctctcacttttcaaccactgattcgaactatgaatgg
aaagcacccaaaaagtcatccctgggtaacgttcagttttcatcagattttgatgatttt
gactatagctcttgggatgctatgtgctatctagatcctagtaaggctgttgaagaagat
gattttgtagtgggcttctggaatccatcagaagaaaactgtggtgttgatgcaggaaaa
caatctatctcatatgacttgcatacagagcagtgtattgctgacaaaagcattgcagac
tgtgtggaagccctgttgggctgctatctgaccagctgtggtgaaagagctgctcagctt
ttcctgtgttcattggggctgaaggtgctccctgtaattaaaaagactgattgggaaagc
actttgtgtgccaccggagagaactgtaacagtgagcagaagaatctttcaccaaactct
gtttctgcttctgtagctaattcagagccttctctttataaagacctggagtatggctgt
ttgaagattccaccaaggtgtatgtttgatcacccagatgctgagaaaaccctgaatcac
cttatttctggttttgaaaactttgagaagaaaataaactacagttttaagaacaaggct
tatcttcttcaggcatttactcatgcctcataccattataataccattactgattgttac
cagcgcttagaattcctgggagatgcaattttggactacctcataaccaagcacctttac
gaagacccacggcaacattctccaggagttcttactgacctgcgatctgctctagtcaat
aataccatttttgcatcactagctgtaaagtacgactaccacaagtacttcaaagctgtc
tctcctgaactgtttcatgttattgatgactttgtgcagtttcaaatggaaaagaatgaa
atgcaaggaatggattctgagctcagaagatctgaagaagatgaagaaaaagaggaagac
attgaagtaccaaaggccatgggggatatatttgagtcccttgctggtgccatttatatg
gatagtggaatgtctttggaaatggtttggcaagtgtactatccaatgatgaggccatta
atagaaaaattttctgctaatgtgcctcgttccccagtgcgagagctgctggaaatggag
ccagagacggccaaatttagtcctgcagaaagaacttacgatggaaaggtcagagtaaca
gtggaagttgtaggaaagggaaagtttaaaggtgttggcagaagctacaggattgccaaa
tctgcagctgcaagaagagcactacgaagcctcaaagcaaatcaacctcaggtcccaaac
agctga
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