Anas platyrhynchos (mallard): 101805223
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Entry
101805223 CDS
T02816
Symbol
PRPF39
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apla03041
]
101805223 (PRPF39)
Spliceosome [BR:
apla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101805223 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
Mad3_BUB1_I
TPR_11
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
101805223
NCBI-ProteinID:
XP_027314083
Ensembl:
ENSAPLG00000010785
LinkDB
All DBs
Position
5:1302669..1317551
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AA seq
674 aa
AA seq
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MENSDNTEEEKTTTTTVSNDSTGNGTETATEEQHMDFSTEIMSVTEMEQSPDSSPDLNEE
NAQEEGEIPNIESLQTTDIEAGFPPDFDKFWKVVEDNHQDFTGWVYLLQYVEQENHIPAA
RKAFDKFFTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLK
DTLDPDDPETNNTIRGAYEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTSIYDRILG
IPTQLYSHHFQRFKDHVQNNLPRELLTTEQFIQLRRELASANGHSGEDVSPGDDLPSGTE
DITDPAKLITEIENMRHRIIEIHQEMFNHNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLK
NWKEYLEFEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACT
IHLPKKPMVHMLWAAFEEQQGNIDEARRILKTFEECILGLAMVRLRRVSLERRHGNMEEA
EHLLEEAIRNAKSVSESSFYSIKLARHLFKVQKNLPKARKVLSEAIEIDKENTKLYLNLL
EMEYSGDLKQNEENILSCFDKAVNGELSIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEH
QALLKEQDSLKRRAENGSEEPDEKKMLTDDPTMASAQMMDGDMQVNQAAYNYNAWYQYNY
QNAWNYGQYYSPST
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagaactcggataatacagaagaggagaagacgacaacaacgactgtaagcaatgac
agcacaggcaatggcaccgaaacagcaacagaagaacagcatatggacttcagtacagaa
attatgagtgtaactgagatggaacaatcacctgatagttcccctgatttgaatgaagag
aacgcacaagaagagggtgaaattccaaatatcgaaagcttacagacgacagatattgag
gctggctttcctccagattttgacaagttctggaaagtagtagaggacaatcaccaggat
ttcacaggatgggtatatctactgcagtacgtagagcaagagaaccacataccggctgcc
aggaaagcgtttgacaagtttttcacacattatccatattgctatggatattggaaaaag
tatgcagacctcgaaaagcgacacgacaacattaaacagtccgatgaggtttatcgcaga
gggcttcaggcaattcctcttagtgttgacctttggatacattatataaacttcttaaaa
gacaccttggaccccgatgatcctgaaactaacaatacgattcgaggagcctacgaacac
gcggttttagccgctgggacagatttccgttctgacagactatgggagatgtatataaac
tgggaaaatgagcagggaaacctgagggaagttacatccatatatgatcgtatccttgga
attccaacacagctctacagtcatcacttccaaaggtttaaagaccatgtgcaaaacaat
ttgccacgagaacttctaactacggagcagtttattcagctgcgcagagaactggcatct
gcgaatggccacagtggggaggatgtgtcacctggagatgatctgccctctggtactgaa
gatataactgaccctgccaagctaatcactgaaatagaaaacatgaggcacagaatcatt
gagattcatcaagaaatgttcaatcacaatgaacatgaagtcagtaagaggtggacattt
gaggaagggataaagaggccttactttcacgtaaaacctctggagaaagctcagctgaaa
aactggaaagagtacttagaatttgagatagaaaatggaactcatgagcgagttgtggtc
ctctttgaaagatgtgttatttcatgtgccctctatgaggacttctggattaagtatgcc
aaatacatggagaatcatagtattgaaggagtgaggcatgtctacagcagggcttgcaca
atacatcttcccaagaaaccgatggttcacatgctgtgggctgcctttgaggaacagcag
ggcaacatcgacgaagcaagaagaatcttgaaaacatttgaagaatgtattctaggtcta
gctatggttcgcttgcgaagagtaagcttagagcgcagacatggaaacatggaagaagct
gaacacctgcttgaagaagccattaggaatgccaagtcagttagtgaatcgtcattttat
tccatcaaattagctcggcacctcttcaaagtacagaagaatcttccaaaggcaagaaaa
gtgctgtcagaagccatagaaattgacaaagaaaatacaaaactgtatctcaacttactt
gaaatggagtacagcggtgatctcaagcaaaatgaagaaaacatcttgagctgttttgat
aaagctgttaatggtgaattgtctataaaaatgaggattacattttctcagagaaaagtg
gaatttcttgaagactttggttctgatgtaaacaagcttttggatgcttatgatgaacat
caagcacttctaaaggagcaggattctttgaaaagaagagcagagaacgggtcagaagag
ccagatgaaaaaaagatgctcacagatgacccaactatggcatcagcacagatgatggat
ggggacatgcaggtcaatcaggcagcatataactataacgcctggtatcagtacaattac
cagaacgcgtggaattacggacagtattattctccttcaacttga
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