Anas platyrhynchos (mallard): 113839648
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Entry
113839648 CDS
T02816
Symbol
SOGA1
Name
(RefSeq) LOW QUALITY PROTEIN: protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apla03036
]
113839648 (SOGA1)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
113839648 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
113839648
NCBI-ProteinID:
XP_038022038
LinkDB
All DBs
Position
21:complement(4036045..4057337)
Genome browser
AA seq
1474 aa
AA seq
DB search
MASSRLRLSASLAFSDLTEELLDAGPDGLLRELEDLRSENDYLKDEIEELRAEMLEMRDV
YMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRVAQTGQVDGELIHSLEQDVKV
AKDVSVRLHNELEVVEKKRIRLEEENEDLRQRLIETELAKQVVQNEMDKLRENSLKKRGS
RSLGKAEKKPSVQEDSADLKCQLHFAKEESALMCKKLTKLAKENDGMKEELLKYRSLYGD
LDSSLSVEELADSPHSREAELKVHLKLVEEEANILSRRIVELEVENRGLRAEMDDMKGQG
DRELPGQDLRFLACPSGCGDAGDTVVELRRHLQFVEEEADLLRRSLLELEDQNKLLMNEL
NKYKSDHELDVTLSEDSCSVVSEPSQEELATAKVQISELSGKVKKLQYENRVLLSNLQRC
DLASCQTTRPMLETDAEAGDSAQCVPTTGWRDGHGGELLKAKDLETLLGIRDQAALVSKA
IDVLISDANGFTSGLKLCLDNECVGGLLAEAVDNSSEGPSDAKLMNVLLMRLGVLQQDLG
CFMRKVDHLAGXASRSTRTPSPSPGSHEATKEGLQKEHGSDFQQPDFRDADPYRITHTKD
TDPAHPRSYKTCRPDENDSYATEMKELQLVLSEANESLRGLQEQLSQERQLRKDEVDNFS
QKICQLKEDHQKALLRREFELQSLNLQRRLEQKFWSQEKNLLVQESQQFRQSFLLLFMKL
KWFLKRWRQGKIVHSEGDDFLEVNSMKELYLLLEEEELAPQQQADNKTCAGDAWTPNTPN
ECIKTLADMKVTLKELCTELREERRGAGELQQQFTKAKAAWEMERAELKCHIAQLEAKAG
KGLTERALPDWKVALKREREEHQHLLAESYSAVMDLTKQLQISEKNWNQEKVELLARFKE
EQQQAEQQAKDLQNKLNQLQKGANPWALKHSEMEKHGGNWKEALNEKITDKETISEEEAK
GTNLKRTKSVSSMSEFESLLDCSPYLPGKTAPGTGLPPPHCTYVNIEQPAPDGLAKEKLG
ISSWDYSRASSFSGHDPAQKQMQRSYTAPDKTGIRIYYSPPVARRLEAPLVHNKEGKIMI
EPGFLFTMAKPKEPEESASAESTYSQWLCNFSKQQRELLDGGAVESAVPPVPRFPPSLHD
LEISGNMSDDMKEITNCVRQAIRSSSLERKVKSASSQTVGLAHVGTQTIQTVSVGLQTDL
PRGGVHGKSWSPRSSSLVSVRSKQISSSLDKVHSRIERPCCSPKYGSPKLQRRSSSKLDA
SKDRSLWNLHQGKQNGSAWARSTTTRDSPVLSNINDGLSSLFSVVEHAGSTESIWKPGCP
DGSRAKPEAPKYGLVQEFFRNVCGRAQSPTAPPEKKDASGGEEGAKKTEHPGPAAYHPAE
SASRILSKKVLKQSSCEDPKPSSPGQGSKEAAPRDPDLISALASEDMACDCSSQSLTSCF
ARPSRSAARHSPSKCRLHPADPPRAEEKPGPLSE
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagccggctgcgcctcagcgcctcgctcgccttctccgacctcaccgaggag
ctgctggacgccggccccgacgggctgctccgcgagctggaggacctgcgctccgagaac
gactatctcaaggatgagatcgaggagctgcgcgctgagatgctggagatgagggacgtc
tacatggaggaggacgtctaccagctgcaggagctgcggcagcagctggaccaggccagc
aagacgtgccgcatcctgcagtaccggctgcgcaaagccgagcggcgcagcctgcgcgtg
gcacagaccggccaggtggacggcgagctcatccacagcctggagcaggacgtcaaggtg
gccaaggacgtctccgtgcggctccacaacgagctggaggtggtggagaagaaaaggatc
aggctggaggaggagaacgaagacctgcgccagcggctgatcgagacggagctggccaag
caggtggtgcagaacgagatggacaagctccgagagaattccctgaagaaaaggggctct
cgctcccttgggaaggccgagaagaagccgtcagtgcaggaggacagcgcggacctgaag
tgccagctgcatttcgccaaggaggagtcagccctgatgtgcaagaagctgaccaagctg
gccaaggagaacgacggcatgaaggaggagctgctgaagtacaggtccctctacggggac
ctcgacagctccctgtccgtggaggagctggccgactcgccccactcgcgcgaggccgag
ctcaaggtccacctgaagctggtggaggaggaagccaacatcctcagccgcaggatagtg
gagctggaggtggagaaccgcggcctgcgggccgagatggacgacatgaagggccagggg
gacagggagctgccggggcaggacctgcggttcctggcgtgcccctcgggctgcggggac
gcgggggacacggtggtggagctgcgccggcacctgcagttcgtggaggaggaggccgac
ctgctgcgacgctcgctgctggagctggaggaccagaacaagctcctgatgaacgagctc
aacaagtacaagtcggaccacgagctggacgtgacgctgtcggaggacagctgctcggtg
gtcagcgagccctcgcaggaggagctggccacggccaaggtgcagatcagcgagctgagc
ggcaaggtgaagaagctgcagtacgagaaccgtgtcctcctctccaacctccagcgctgc
gacctggcctcctgccagaccacccggcccatgctggagaccgacgccgaggccggggac
tcggcacagtgcgtccccaccaccggctggagggacgggcacggcggcgagctcctcaag
gccaaggacttggagaccctgctgggcatccgggaccaagcggcgctcgtcagcaaagcc
atcgacgtcttgatctcggacgccaacggcttcacctccggcttgaagctgtgcctggac
aacgagtgcgtgggggggctgctggccgaggcggtggataacagcagcgagggccccagc
gacgccaagctgatgaacgtgctcctcatgaggctgggggtgctgcagcaggacctgggc
tgcttcatgaggaaggtggaccacctcgccggcnaggcctcaaggagcacgcggactcct
tccccttctccaggcagccacgaggccaccaaggaggggctgcagaaggagcacggctcc
gacttccagcagcctgattttagggacgccgacccttaccgcatcacccacaccaaggac
acggaccccgcacatccccggagctacaaaacctgccggcctgacgagaacgactcctac
gccactgagatgaaggagctgcagctggtgctgtcggaggccaacgagagcctccggggg
ctgcaggagcagctctcgcaggagaggcagctgcgcaaggacgaggtggacaacttctcg
cagaagatctgccagctgaaggaggaccaccagaaagccctgctgcggcgggagttcgag
ctgcagagcctgaacctgcagaggcggctggagcagaagttctggagccaggagaagaac
ctgctggtgcaggagtcgcagcagttcaggcagagcttcctcctgcttttcatgaagctc
aagtggttcctcaagcgctggcgccagggcaagatagtgcacagcgagggcgatgacttc
ctggaggtgaacagcatgaaggagctgtacctgctgctggaggaggaggagctcgcccca
cagcagcaggcggacaacaagacctgcgctggggacgcctggacccccaacacgcccaac
gagtgcatcaagacgctggcggacatgaaggtgaccctgaaggagctgtgcacggagctg
cgggaggagcggcgcggcgccggcgagctgcagcagcagttcaccaaggccaaggccgcc
tgggagatggagcgtgccgagctcaagtgccacatcgcccagctggaggccaaggcgggc
aaaggcctcacggagcgggcgctgccggactggaaggtggccctgaagagggagcgcgag
gagcaccagcacctcctggctgagtcctacagcgccgtcatggacctgaccaagcagctg
cagattagcgagaagaactggaaccaggagaaggtggagctgctggcacgcttcaaggag
gagcagcagcaggcggagcagcaagcgaaggacctgcagaacaaactcaaccagttgcag
aaaggagccaacccatgggctttgaagcactctgaaatggagaagcacggcggcaactgg
aaagaggctctcaacgaaaaaatcacagacaaagagacaatctctgaagaagaagccaag
ggaaccaacctaaaaaggaccaagtccgtttcctccatgtcagagttcgaaagcttgctc
gactgttctccctacctccctggaaagactgcgcccggcaccggccttcctcccccgcac
tgtacatatgtgaatatcgagcaacctgcccctgacggcctggccaaggagaagctgggc
atctcctcctgggactactcgcgggccagcagcttctcggggcacgacccggcccagaag
cagatgcagaggagctacacggcgcccgacaagacggggatccgcatctactacagcccg
cccgtggcgcggcggctggaggcgcctctggtgcacaacaaggaggggaagatcatgatc
gagcccggcttcttgttcaccatggccaagcccaaggagccggaggagtcggccagcgcg
gagagcacgtacagccagtggctgtgcaacttctccaagcagcagcgggagctgctggac
ggcggcgcggtggagagcgcggtgccgccggtgccccgcttcccgccctcgctgcacgac
ctggagatctccggcaacatgagcgacgacatgaaggagatcaccaactgcgtgcggcag
gccatccgctccagctcgctggagaggaaggtgaagagcgcctcgagccagacggtgggg
ctggcccacgtggggacgcagaccatccagacggtgagcgtgggcctgcagacggacctg
ccgcgcggcggcgtgcacggcaagagctggtccccccgcagctcctccctcgtctccgtg
cgtagcaagcagatctcctcctccttggacaaggtccactccaggattgagcggccctgc
tgctccccaaaatacggctccccgaagctgcagaggaggtcttcctccaaactggacgcc
tccaaggacaggagcctctggaacctgcaccagggcaagcagaacggctccgcctgggcc
cgctctaccaccacccgcgacagccccgtgctcagcaacatcaacgacggcttgtccagc
ctcttcagcgtggtggagcacgcgggcagcaccgagtccatctggaagccgggctgcccc
gacggcagcagggccaagcccgaggcccccaagtacggcctggtgcaggagttcttcagg
aacgtctgcgggcgggcgcagagccccacagcccccccggagaagaaggatgccagtggc
ggggaggagggtgccaagaaaaccgagcaccccggcccggccgcctaccacccagccgaa
agcgcctcccgcatcttgagcaagaaagtcctcaaacaaagcagctgcgaggacccgaag
ccgtcgtcccccggccaagggagcaaggaggcggccccccgggaccccgacctcatctcg
gctctagccagcgaggacatggcgtgcgactgcagctcgcagtccctcacctcctgcttc
gcccggccctcccgctccgccgcccgccactcgccctccaagtgcaggctgcaccccgcg
gacccccccagggcggaggagaagccggggcccctgagtgagtga
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integrated database retrieval system
