Anas platyrhynchos (mallard): 119713291
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Entry
119713291 CDS
T02816
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apla04121
]
119713291 (TRIM50)
Ubiquitin system [BR:
apla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119713291 (TRIM50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
PRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-Nse
zf-RING_4
U-box
Sina_RING
zf-ANAPC11
XhlA
Rotamase
Rep_trans
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
119713291
NCBI-ProteinID:
XP_038021841
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All DBs
Position
20:complement(11541304..11546784)
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AA seq
501 aa
AA seq
DB search
MLKGGSMARRMSIDELEDQLLCPICLEVFKEPLMLQCGHSYCKSCVVSLSGELDGQFLCP
VCRQTVDCSASPPNVTLARVIEALQSRGEAEPAPESCPTHHNPLSLFCETDQEVICGLCG
TIGNHRQHKITPISTTYCRMKEELSVLLTDVHQYKRNLDEHFSKLINNKSRIANEADVFK
WVIRKEFQELHRYIDEEKATFLESVEGKAAQLITSIESQVKQTSDALQRLKEIHSSLEML
SNENQLDFIRKYSSSQFRSELPSLLPGDGIFSPISFKPCFHQDDIKMTVWKRLHRHVLPA
PEMLKLDPVTAHPLLELFKGDTVVQCGLYQRRDSNPKRFDSSSCILTCKGFSCGQHYWEV
IVGTRNHWRVGIIKGTVSRKGKLSKSPENGVWLIGLKEGKVYEAFSTPRATLPLTARPQR
IGIYLHYERGELTFYNADSPDELSPIYTFQAEFQGQLYPIVDLCWPERGPYSPPIILPPP
GATRRPQGPCRQPLPEAPAEP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaggtggcagcatggctcggaggatgagcatcgatgagttggaagaccagctc
ctctgtcccatctgcttggaggtcttcaaggagcccttgatgctgcagtgcgggcattct
tactgcaagtcgtgtgtggtgtcactgtctggagagctggacgggcagttcctgtgcccc
gtgtgccgccaaaccgtggactgcagcgcctcgccacccaacgtcacactggcccgtgtc
attgaggcactgcagagccgaggcgaggcagagcccgccccagagtcctgcccaacacac
cacaaccccctcagcctcttctgcgagactgaccaagaggtgatctgtgggctgtgcggc
accatcgggaaccaccgccagcacaagatcacccccatctctaccacatactgccggatg
aaggaggagctgtctgtgctgctaaccgatgtccaccagtacaagaggaacctggatgaa
cacttcagcaagctcatcaacaacaaaagccgcattgcaaacgaggcagatgtcttcaag
tgggtgatccggaaggagttccaggagctgcacagatacattgatgaggagaaggccacc
ttcctggagagcgttgaggggaaagcagctcagctcataacctccattgagtcccaggtc
aagcagacatcagatgccctgcagaggctgaaggagatacatagctctctggagatgctc
agcaatgaaaaccagcttgatttcatccgtaaatacagctcctcccagttcaggtcagag
cttcccagcctgctcccaggtgatggcatctttagccccatttccttcaagccatgtttc
caccaagatgacatcaagatgacagtttggaagcggctgcaccgccatgtcctgccagct
ccagagatgctgaaactggacccggtgacagcacatcccctcttggaactcttcaagggt
gacacagtggtgcaatgtggactctaccagcgccgggatagcaaccccaagcgttttgac
tccagcagctgcatcctcacctgcaagggcttctcctgtggccaacactactgggaggtg
attgtgggcacccgcaaccactggcgcgtgggcatcatcaagggcacagtcagccgcaaa
gggaagctcagcaagtctcctgagaacggcgtgtggctcattggcctgaaggaaggcaaa
gtctacgaggccttcagcaccccgcgggccacccttcccctgaccgcccggccgcagcgc
atcggcatctacctgcactacgagaggggcgagctgaccttctacaacgccgacagcccc
gacgagctcagccccatctacaccttccaggcggagttccagggccagctctaccccatt
gtggacctgtgctggcccgagcgggggccctactcgccccctatcatcctgccccccccc
ggcgccacccggcgcccccaggggccgtgccgccagccgctccccgaggcgcccgccgag
ccgtag
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