Anas platyrhynchos (mallard): 119714264
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Entry
119714264 CDS
T02816
Symbol
LRFN1
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
apla04515
]
119714264 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
apla04990
]
119714264 (LRFN1)
Cell adhesion molecules [BR:
apla04515
]
Immunoglobulin superfamily
SALM family
119714264 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
apla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119714264 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
fn3
Ig_2
LRRCT
Ig_DSCAM-DSCAML_C
Fndc10
Sp38
Motif
Other DBs
NCBI-GeneID:
119714264
NCBI-ProteinID:
XP_038025286
UniProt:
A0A8B9ZIW1
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Position
33:complement(43581..48924)
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AA seq
637 aa
AA seq
DB search
MAKLLVPLVVLGAVAGAQRCPPRCLCPAAAPSPTLLCARTGLLAVPPSLDRGAVELRLAD
NFIGAVGRADFANMSSLVHLTLSRNGLRRLAPGAFADLRALRALHLDGNRLPALSGAQLR
GLASLRHLILANNQLAAIEPAAFAAFAATVEDLDLSHNNLPALPWEAVAGMASLATLTLD
HNLLERVPAGALAGLPRLARLDLTANRLRALPPVPGPPGPSLAAGGNPLHCNCELLWLRR
LARPDGLESCASPPPLAGRLLWAVPEEELACRAPAIAGAAASPAAVLEGQPLRLGCAAAG
DPPPALHWLGPDGRLVQNGSRRALGADGSLQLRVATLRDHGAFTCVASNAAGEAAARVQV
AVLPLPVPRRDGEGEGEAQPGPEPSDMARAGGNESRPAGERRIVAAELTASSARIRWLPQ
RHVPGLRMFQIQYNSSLDDSLVYRLLPPSSRSFVLRDLAAGREYDLCVSALYAEGSAAPP
ATRALGCVRFATAGGSPGCAAPRPHFLGGTVIIVIGAAIAASVLVFILILTARYKAARRL
PAANVASVCSQTNGTHRAPEPEPPPPPLPPPSAPPAPPVLAPLGAPGGARGLFPSHSYPR
RARTRRHGSLPRLDAPDALPTLRPSFGSTHWMLESTV
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagctgctggtgccgctggtggtgctgggggcggtggcgggggcccagcgctgc
cccccccgctgcctgtgcccggcggccgcccccagccccacgctgctgtgcgcccgcacg
gggctgctggcggtgccccccagcctggaccgcggggcggtggagctgcggctggctgac
aacttcatcggggccgtggggcgcgccgacttcgccaacatgagcagcctggtgcacctc
accctgtcccgcaatgggctgcggcgcctggcccccggcgccttcgccgacctgcgcgcc
ctgcgcgccctgcacctggacggcaaccggctgccggcgctcagcggggcgcagctgcgg
ggcctggccagcctgcggcacctcatcctggccaacaaccagctggccgccatcgagccc
gccgccttcgccgccttcgccgccaccgtggaggacctggacctgtcgcacaacaacctg
ccggcgctgccctgggaggcggtggccggcatggccagcctggccacgctgacgctcgac
cacaacctgctggagcgcgtccccgccggcgccctggccggcttgccgcgcttggcccgc
ttggacctgacggccaaccggctgcgggcgctgccgccggtgccgggcccgccgggcccc
agcttggcggcgggcggcaacccgctgcactgcaactgcgagctgctgtggctgcggcgc
ctggcgcggccggacgggctggagagctgcgcctcgccgccgccgctcgccggccgcctg
ctctgggccgtgccggaggaagagctggcgtgccgagcccccgccatcgccggggcggcc
gccagcccggccgccgtgctggaggggcagccgctgcgcctgggctgcgccgccgccggg
gacccgccgccggcgctgcactggttgggccctgacgggcggctggtgcagaacggctcg
cggcgggcgctgggggccgacggctcgctgcagctgcgggtggccacgctgcgggaccac
ggcgccttcacctgcgtggcttccaacgccgccggcgaggcggccgcccgcgtgcaggtg
gccgtgctgccgctgcccgtgccccggcgggacggggagggcgagggcgaggcgcagccc
ggccccgagccctcggacatggcccgcgccgggggcaacgagtcgcggccggcgggcgag
cggcgcatcgtggcagccgagctgacggcctcctcggcgcgcatccgctggctgccgcag
cgccacgtgccggggctccgcatgttccagatccagtacaacagctccctcgacgactcc
ctcgtctacaggctgctgccgccctccagccggagcttcgtgctgcgggacctggcggcg
gggcgcgagtacgacctctgcgtctcggcgctctacgccgaaggctcggccgcgccgccc
gccacccgcgccctgggctgcgtccgctttgccacggccggggggagccccggctgcgcc
gccccccggccccatttcctggggggcaccgtcatcatcgtcatcggtgctgccatcgcc
gcctccgtcctcgtcttcatcctcatcctcaccgcccgctacaaggccgcccgccgcctg
cccgccgccaacgtcgccagcgtctgctcgcagaccaacggcacccacagagcccccgag
ccggaaccgccgcccccgccgctgcccccgccgtcggcccccccagcacctccggtactg
gcacccttgggtgctcccgggggtgcgcgggggctttttcccagccacagctacccgcgg
cgcgcccggactcggcggcacggctccctgccccgcctcgacgcgcccgacgccctcccc
accctgcgcccgtccttcggcagcacccactggatgctggagagcaccgtctaa
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