Anas platyrhynchos (mallard): 119714268
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Entry
119714268 CDS
T02816
Symbol
SAMD4B
Name
(RefSeq) LOW QUALITY PROTEIN: protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
119714268 (SAMD4B)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119714268 (SAMD4B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
SMG1
SAM_3
Motif
Other DBs
NCBI-GeneID:
119714268
NCBI-ProteinID:
XP_038025292
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All DBs
Position
33:49343..55220
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AA seq
668 aa
AA seq
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MMFRDQVGIVAGWFKAWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCADIHLLEA
EANSAAAISQWPQEPAEAAVALLLAHLPLLQPGNAAAKAEYMKRLQKVLAYAIESNRCVE
ESRQLLSYALIHPATTLDDRSALALWLGHLEERLAGAPPPPPPPPPPPPPPPPPRRAPHD
WPEHGPPEIGPPWPEAAPRENGHPPPFHPPPAAGSGGNGLGGAALPCQLHPSPLKRSLSL
VPGSPQGGGGEWPGGGGGEEPGGPPPPPRPPFGEHAPLSPQSSVASSGSEQTEEPPGGRN
TFQEDGSGMKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEHHLESQNVTKGARHKIALS
IQKLRERQSVLKALEKDILEGGNLWTALQELQQIMVTPIKAFRPPPAPPANTGAPPDAAA
APPGAADAFAPHPAADPEAPAAPVPDGDIPGQFTRVMGKVCTQLLVSRPDEENITSYLQL
LEKCLSHEAFTETQKKRLLSWKQQVLKLLRAFPKKVPLEGPGYRPPKGWAFGSNSLPIAG
SVGGGAGGRRGQRPFALPPRALPPTRLGLLGPAGGGPAPRPPLGGPPPPLGTQGRQSLWF
GSGGAAGRSAVQRTHSLPVHPSPQALLAFPQECPLPGTDLEINPTLESLCLSMTEHALGD
GTDKTSTI
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggaccaggtggggatcgtggccggctggttcaaggcttggaacgagtgc
gagcagaccgtggcgctgctctcgctcctcaagcgcgtcacccgcacccaggcgcgcttc
ctgcagctctgcctcgagcactcgctggccgactgcgccgacatccacctcctggaggcc
gaggccaacagcgccgccgccatcagccagtggccccaggagccggcggaggcggcggtg
gccctgctgctggcccacctccccctcctgcagccgggcaacgccgccgccaaggccgag
tacatgaagaggctgcagaaggtgctggcctacgccatcgagagcaaccgctgcgtggag
gagagccgccagctgctctcctacgccctcatccacccggccaccaccctggacgaccgc
agcgccctggccctgtggctgggccacctggaggagcgtttggccggcgccccccctcct
ccgcccccccccccgccgccacccccacccccgccgcccccccggcgtgccccccacgac
tggcccgagcacgggccccccgaaatcgggcccccgtggcctgaggcggccccccgggag
aacgggcacccccccccgttccaccccccccccgccgccggcagtggcgggaatgggctg
gggggcgcggcgctgccctgccagctgcaccccagccctctgaagcgctccctgtcgctg
gtgcccggcagtccccagggagggggtggcgagtggcctgggggggggggcggcgaggag
ccgggggggcccccccctcctcctcgcccccccttcggcgagcacgcccccctgtcgccg
cagagcagcgtggcctcgtcgggcagcgagcagaccgaggagccccccggcggccgcaac
accttccaggaggacggcagcggcatgaaagatgtcccctcgtggctgaagagcctgcgg
ctgcacaagtacgcggcgctcttctcgcagatgacctacgaggagatgatgacgctgacc
gagcaccaccttgagtcgcagaacgtcaccaagggcgcgcggcacaagatcgccctcagc
atccagaagctgcgggagcgccagagcgtcctcaaggcgctggagaaggacatcctggag
gggggcaacctgtggacggcgctgcaggagctgcagcagatcatggtgacgcccatcaag
gctttccggccccccccagccccccctgccaacaccggcgccccccccgacgctgccgcc
gcccccccgggggccgccgacgccttcgccccccacccggccgctgaccccgaggccccc
gcggccccggttcctgatggggacatcccggggcaattcacccgggtgatgggcaaagtg
tgcacccagctgctggtgtcgcggccggacgaggagaacatcaccagttacctccagctc
ctcgagaagtgcctgagccacgaggcgttcacggagacgcagaagaagaggctcctctcc
tggaagcagcaggtcctgaagctgctccgcgccttccccaagaaggtgccgctcgagggc
ccaggctaccgcccccccaaaggctgggccttcggctccaactcgctccccatagctggc
tctgtgggggggggggcgggggggcggcgggggcagcgcccctttgcgttgcccccccgc
gcgctgccccccacccgcctggggctgctgggccctgcgggggggggcccggccccgcga
ccccccctcggcggccccccccctcccctcggcacccagggccgccagagcctgtggttc
ggcagcgggggggccgcggggcgcagcgcggtgcagcgcacccactcgctgcccgtccac
ccctcgccccaggccctgctcgccttccctcaggagtgccccctccccggcaccgacctg
gagatcaaccccaccctggagtcgctgtgcctgagcatgacggagcacgcgctgggggac
ggcacagacaagacctcgaccatctga
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