Anas platyrhynchos (mallard): 119714504
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Entry
119714504 CDS
T02816
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
119714504 (TAF1C)
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
119714504 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
119714504
NCBI-ProteinID:
XP_038026981
EnsemblRapid:
ENSAPLG00030026058
LinkDB
All DBs
Position
Z:10710730..10714826
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AA seq
925 aa
AA seq
DB search
MEFPAALFPSYFGCGPPKDEAGPAPAAGWGEHGQVLEAGSGQVPPPFVPRRSRQGESWEP
CEAAAVPLLPPNDSCWMPPLVPQDILYRGVLRRKLRAGRSGAALDFTKQLGHFFVDHPED
AFGSLGQLLHKNFHLGDSKLKKPSRDTTIRMTALVEELNRLEARRGCPRRHFVSRLRWFS
HLCRDWLFEVPLGLLADCVHEELLLQWAGLLFDDSPTGGALAWLPPQEASGRVGRLVYPG
AEAMNYLYFQDVVLEEQPRARGAPAQFELNGRIRQVGAARVDGEDFVGVRSDYHCGVWRV
PGRAGAAPSPLQVIRTDVPASCLTVSPHLPGELAVCTQSGAVYLWSVETGLQRLRHDPQT
LFFRDHSPWRWSDFTAHPRVLSCADRTGIQCLDTRAPSSCHFDFFKVGEEAGCQQGERVV
LPMYLGRAHPCQHLVTTQFAVYLMDERLPLVPVLKWAHMMKAPPLFAQVAPGGPGRSHKV
VLGASRMQELLLLQYTGGSKSACQLVGPPQRLQSIASCLPHLPTQLPHRHHWLQQRLGAP
AAGLAAVQHQQGRQEALVVFQLSEAGDVFYQALRHEAAPAPAPRQEEEEEATQEAPGSSP
LFSSEEEAQEEEDEGEQTFYLSNLEVIINDEEEEEVGTPVATEEAEPPAERRASPQPPPA
VPSPAAALRYRRWLRALLRVWGGSPRHACPPGPPTISKRRLFTRKELAAPAAPSALHQQL
RQRLRQAMCLRERIQRWDAAPEPPGPPPPPPQEPDALSARLTAAWGGEWGSGGAGTSLAQ
RRQALRERRRRQKAARAHRSLSASFTSSVTYQSELSELSDAGPPRSSPPATPLEVVVGGS
PPAAPSPPPPVEPMLSSQELRSRGIPKERRRTLRDYLAVWAEGPQDPPEPPSTPGAPLCI
PSSQSQLSSSSSSQPLRRKRPHMGF
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggagttccccgccgctctcttcccttcctatttcggctgcggcccccccaaggatgag
gccggcccagcaccggctgccggctggggggagcacgggcaggtgctggaggccgggagt
gggcaggtgccgccgccgttcgtgccccgccgcagccggcagggcgagagctgggagccc
tgcgaagctgctgccgtgcccctgctgccacccaacgacagctgctggatgccccctctg
gtcccccaggacatcctgtaccgcggcgtgctgcgcaggaagctgcgggcagggaggtcg
ggagctgcgctggacttcaccaagcagctgggacacttctttgtggatcacccagaggac
gccttcggctccctggggcagctgctgcacaagaacttccacctgggtgactccaagctg
aagaaaccctcccgggacaccaccatccgcatgacggccctggtggaggagctcaaccgg
ctggaggccaggcgcggctgcccgcggcgtcacttcgtctcccgcctgcgctggttctcc
cacctgtgccgggactggctctttgaggtgccactggggctgctggccgactgcgtgcac
gaggagctgctgctgcagtgggccggcttgctctttgacgacagccccaccgggggggca
ctggcctggctgcccccccaggaggcgagcgggcgcgtgggacgcctggtctaccccggc
gcggaggccatgaattacctctatttccaggatgtggtgctggaggagcagccccgtgcc
cgaggggccccggcgcagtttgagctcaacgggcgcatccggcaagtgggtgccgcacgg
gtggatggagaagattttgtgggcgtccgttccgactaccactgcggagtttggagggtg
ccgggcagggcgggcgctgcccccagcccgctgcaggtcatccgcaccgacgtgccggcc
tcctgcctcaccgtcagcccacacctcccaggggagctggctgtctgcacccagagcgga
gccgtctacctctggagcgtcgagactgggctgcagcggctccgccacgacccccagacc
ctgtttttccgggaccactcgccctggcgctggagcgacttcaccgcgcacccacgggtg
ctgagctgcgccgaccgcaccggcatccagtgcctggacacccgggccccctccagctgc
cacttcgacttcttcaaggtgggcgaggaagccgggtgccagcagggtgagcgcgtggtg
ctgcccatgtacctgggccgggctcacccctgccagcacctcgtcaccacccagttcgcc
gtgtacctgatggacgagcgcctgccgctggtgcccgtgctgaagtgggcgcacatgatg
aaggccccccctctttttgcccaagtggcgccggggggcccgggcaggagccataaggtg
gtgctgggcgcctcccgcatgcaggagctgctgctgctgcagtacacagggggcagcaag
tcggcctgccagctggtgggaccaccgcagaggctgcagagcatcgccagctgcctgcct
cacctccccacacagctcccacaccgccaccactggctccagcagcgcctcggtgccccc
gccgccgggctggccgccgtgcagcaccagcagggccggcaggaggccctggtggtcttc
cagctctccgaggccggggatgtcttctaccaggcactgaggcacgaggcggcgccagca
cccgctccccgccaggaggaagaggaggaggccacgcaggaggccccgggctcttccccg
ctgttcagcagcgaggaggaggcgcaggaggaggaggatgaaggagagcagaccttctac
ctctccaacctggaggtgatcatcaacgacgaggaggaggaggaggtgggcacgccggtg
gccacggaggaagccgagccccccgcggagcgccgcgccagcccccagccccctccagcc
gtgcccagcccggccgctgccctgcggtaccgccgctggctgcgggccctgctgcgggtt
tgggggggctccccgcggcacgcctgccccccgggaccccccaccatcagcaagcggcgc
ctcttcacccgcaaggagctggcggcacccgcggcacccagcgccctgcaccagcagctg
cgccagcggctgcgccaggccatgtgcctcagggagcgcatccagcgctgggatgcagcc
cccgagccccccggacccccgccaccacccccccaagagcccgatgccctgagcgcccgg
ctgacggcagcctgggggggcgagtgggggtctgggggcgcgggtaccagcctggcacag
cggcggcaggcgctgcgggagcggcggcggcggcagaaggcggcacgggctcaccgcagc
ctctcggccagcttcacctcctccgtcacctaccagtccgagctgtccgagctcagcgac
gcgggacccccgcgctcgtcccccccggccacccccttggaggtggtggtggggggctcc
ccgccggctgccccctccccgccgccccctgtggagcccatgctgtcctcgcaggagctg
cgctcgcgggggatccccaaggagcggcggcgcacgctgcgggactacctggccgtgtgg
gcagaggggccccaggacccccccgagccccccagcacgccgggggcgccgctctgcatc
ccctcctcccagagccagctctcctcctcctcctcctcgcagcccctccgccgcaagcgc
ccgcacatgggcttctga
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