Anas platyrhynchos (mallard): 119714629
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Entry
119714629 CDS
T02816
Symbol
PAN2
Name
(RefSeq) LOW QUALITY PROTEIN: PAN2-PAN3 deadenylation complex catalytic subunit PAN2
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119714629 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
119714629 (PAN2)
Enzymes [BR:
apla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
119714629 (PAN2)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119714629 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
119714629 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_like
Motif
Other DBs
NCBI-GeneID:
119714629
NCBI-ProteinID:
XP_038027473
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MNFEGLDPSLAEYAPALHPALDPVLDPHLNPSLLQNVELDAEGVPLEGIAVPDSVHIVEG
MYSELHTAVSEVGVPVSVSHFDLHEEMLWVGNHGGHATSFFGPTLERYSSFQVNSSDDIR
QIQSLENGILFLTKTNLKYMSRGGLIIFDYLMDDSEDMHSLLLTDSSTLLVGGLQNHVVE
IDLNTVQETQKYTVEVPGITIMRQSNRFFFCGHTSGKVSLRDLRTFVVEHEFDAYSGSLS
DFDVHGNLLVTCGFSSRMNGLACDRFLKVYDLRMMRATTPLQVHIDPFFLRFIPTYTSRL
AIISQTGQCQFCEPTGLANPADIFHVNTVGPLIMTFDVSASKQALAFGDSEGCVHLWADS
PEVTFNAYSRETDFALPCMVDTLPHLDWNQDLVPLSLIPVPLTSETLLSDWPAANSAPAP
RRAPPVDPEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKEADNEFDSFNQVPESPIGREE
EPHLYMVAKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLVQNHLCQKEFCLGCELGLLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEATGKVNLGRLIQSWNRFILTQLHQETQEQEGPQAYRGAGSSSFGSSRDSVIGQLFSCE
MENCSMCRCGKETVRVSSTLLFTLSYPESTEKPVKDYEFAQILKRSICLEQNTQAWCENC
EKYQPTVQTRNIRCLPDVLVINCEVNSSKEADFWKTQAEYAFQRAMMRRGGFEITKGKEI
SLGEWKELGNPDTGHSYPSVEELKNVWIPHAIKMSLTKNKELDVCNWSESDELSPSDDPD
SVYVYDLMATVVHILDSRTGGSLVGHIKVGETYHQRKEGVTHQQWYLFNDFLIEPVDKCE
AVQFDMSWKVPAILYYARRNLNAKYNLVIKNPIEASVLLAEASLARKQRKCHATFIPLML
SEMPQAGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGVPFI
DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDVGVKFVGHGLQ
KDFRVINLMVPKDQVIDTVYLFHIPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTALQ
LYRKYLELSQGGSEPDDFRKVLKALYEKGRKLDWKVPEPDSQSSPKHGAVFPPVLPL
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaagggctcgacccctccctcgccgagtatgctcccgctctccaccccgcg
ctcgaccccgtcctggacccgcacctgaaccccagcttgctgcagaacgtggagctggac
gccgagggggtgcccttggagggcatcgcggtgccggactcggtgcacatcgtggagggc
atgtacagcgagctgcacaccgccgtctccgaagtgggcgtccccgtctccgtctcccat
tttgacctgcacgaagaaatgctgtgggttgggaaccacgggggccatgccacctcgttc
tttggccccacgctggagcgctactcctccttccaagtgaacagcagtgatgacatccgg
cagatccagagcctggagaacggcatcctcttcctgaccaaaaccaacctgaagtacatg
tcacgggggggcctcatcatttttgactacctcatggatgactccgaggacatgcacagc
ctcctgctcacggacagcagcactctgctcgttggtgggctgcagaaccacgtggtagag
atagacctcaacaccgtccaggagacgcagaagtacaccgtggaggtacctggcatcacc
atcatgaggcaatcaaaccgcttctttttctgtgggcacacctcggggaaggtctccttg
cgggatctacgcacgtttgtggtggaacacgaatttgatgcctactcaggcagcttgtct
gactttgatgtccacgggaacctgctggtgacctgcggcttctccagccgaatgaacggc
ctggcctgcgaccgcttcctgaaggtgtacgacctgcgcatgatgcgggccaccaccccg
ctgcaggtccacatcgaccccttcttcctccgcttcatccccacctacacctcccgcctg
gccatcatctcccagacaggtcagtgccagttctgcgagcccaccggcctcgccaacccg
gccgacatcttccacgtgaacaccgtggggcctctcatcatgaccttcgacgtctcggcc
agcaagcaggccctggcgttcggcgactcggagggatgcgtccacctctgggccgactcc
ccggaggtcaccttcaacgcctactcccgggagaccgacttcgccctgccctgcatggtg
gacacgctgccccacttggactggaaccaggacctcgtgccgctctcgctcatccccgtg
ccgctcaccagcgagacgctgctctcggactggcctgctgccaactcggctcccgcaccc
cggcgagctccaccagtagatcctgagattctgcgtaccatgaagaaggtggggttcatt
ggctacgccccaaatccgaggaccaagctccgcaaccagatcccctaccggttaaaagag
gcagacaatgagtttgacagcttcaaccaagtgcccgagtccccgattgggcgagaagag
gagccacacctctacatggtggccaagaagtacaggaaggtcacaatcaaatactccaag
ctggggctggaagatttcgatttcaagcattacaacaagacgctgtttgcaggcctggag
ccccacatccccaatgcctactgcaactgcatgatccaggtgctgtatttcttggagccg
gtccgctgcctggtccagaaccacctgtgccagaaggagttctgcctgggctgcgagctg
ggcttgctcttccacatgctggacctgtcccgaggagacccctgccagggaagcaacttc
ctgcgggctttccgcacaatcccagaggcttcagcgctggggctgatcctggctgactcg
gatgaagccacagggaaggtgaacctggggcggctgattcagagctggaaccgtttcatc
ctcactcagctgcaccaggaaacccaggagcaggagggaccgcaggcctatcggggggct
ggcagcagcagctttgggtcttcgagggactcggttattgggcagctgttcagctgcgag
atggagaactgcagcatgtgtcgctgcggcaaggaaaccgtccgcgtgtcctccacgctg
ctcttcaccctctcctaccctgagagcaccgaaaagccagtcaaagattacgagtttgcc
caaattttaaagcgaagcatctgcttggagcagaacacgcaggcctggtgtgagaactgt
gagaagtaccagcccacggttcagacccggaatatccgctgcctgccagacgtcctggtc
attaactgtgaggtgaacagctccaaggaagcagatttctggaagacgcaggctgagtat
gcgtttcagagagccatgatgaggagaggaggctttgagatcaccaaaggcaaagaaatc
tctctcggagagtggaaggaactggggaaccccgacacggggcattcgtatccttctgtg
gaggaactgaagaacgtttggatcccccacgccatcaagatgagcctgaccaagaacaag
gagctagacgtctgcaactggagtgaaagcgatgagctcagcccgtccgatgaccccgac
tcagtgtacgtctatgacctcatggccaccgttgtccacatcctggactcccgcacaggg
ggcagcctggtggggcacatcaaggtgggagagacctaccaccagcggaaggagggggtc
acgcaccagcagtggtatctcttcaacgacttcctcatcgagcccgtggataagtgcgag
gcggtgcagttcgacatgagctggaaggtgccggcgatcctctactacgcccggaggaac
ctcaacgccaagtacaacctcgtcatcaagaaccccatcgaagccagcgtgctgctggca
gaggcctcgctggctcgcaagcagcgcaagtgtcacgccaccttcatccccctgatgctg
agcgagatgccgcaggcgggtgacctggtggggctggatgccgaattcgtcacgctgaac
gaggaggaggctgagctgcgcagtgatggcaccaagtccaccatcaagcccagccagatg
tcggtggccaggatcacgtgcgtgcgcggccagggccctaacgagggcgtccccttcatt
gatgactatatctccacgcaggagcaggtggtggattacctgactcagtactccgggatc
aagcccggagacctggacgccaagatctcctccaagcacctcaccacgctcaaatccacc
tacctgaagctgcgcttcctcatcgacgtgggcgtcaagttcgtgggccacgggctgcag
aaggatttccgtgtcatcaacctcatggtgcccaaggaccaggtgatcgacaccgtctac
ctgttccacatcccgaggaagaggatgatttccctgcgcttcctcgcctggtacttcctg
gacctgaagatccagggcgagacccacgacagcatcgaggacgcgcgcacggcgctgcag
ctctaccgcaagtacctggagctgagccagggcggcagcgagcccgacgacttccgcaag
gtgctgaaggcgctgtacgagaagggccgcaagctggactggaaggtgcccgagcccgac
agccagagcagccccaagcacggtgccgtgttcccccccgtgctgccgctgtga
DBGET
integrated database retrieval system
