KEGG   Anas platyrhynchos (mallard): 119715097
Entry
119715097         CDS       T02816                                 
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03008  Ribosome biogenesis in eukaryotes
apla03013  Nucleocytoplasmic transport
apla03015  mRNA surveillance pathway
apla05164  Influenza A
apla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    119715097 (NXF1)
   03015 mRNA surveillance pathway
    119715097 (NXF1)
   03008 Ribosome biogenesis in eukaryotes
    119715097 (NXF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    119715097 (NXF1)
   05168 Herpes simplex virus 1 infection
    119715097 (NXF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apla03019]
    119715097 (NXF1)
   03009 Ribosome biogenesis [BR:apla03009]
    119715097 (NXF1)
Messenger RNA biogenesis [BR:apla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     119715097 (NXF1)
   mRNA cycle factors
    Stress granule specific factors
     119715097 (NXF1)
Ribosome biogenesis [BR:apla03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    119715097 (NXF1)
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_8 LRR_4 UBA_8
Other DBs
NCBI-GeneID: 119715097
NCBI-ProteinID: XP_038028214
LinkDB
Position
Unknown
AA seq 643 aa
MRVTSRRAAAGPRSVPGAAAMAEEAKGGYSEHDDRVGGRGFPGRRKKGRGPFRGKMYSEV
NHRSRNRGGSGLRARLDEDDGDVPMSEAHDGPRNRYLPYGPRPNRTANIHITVRRDLPAP
ERSSGGGGGGGGGRSQDASRRNWFKITIPYGKKYDKTWLLSSIQNLCSVPFTPVEFHYDH
NRAQFYVEDATTASALKQVSRKITDRDNYKVVIIINSSAPPQSLQNELKPEEIEQLKLCM
SKRYDGSQRALDLKSLRVDPDLVSQSIDVVLNQRSCMLVVLRIIEENIPELQSLNLSSNK
LYRLDDLAELAQKAAGLKILDLSRNELKSERDLDKVKGLKLEELWLDGNPLCDAFRDQAT
YVSSVRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGSDDLKALVLRFLQQYYS
IYDSSDRQGLLDAYHDGACCSLSIPFGHQNPPRNSLNEYFKDSRNVRKLKDPTMRFKLLK
HTRLNVVAFLNELPKTQHDVNSFVVDVCAQTNTLLCFAVHGIFKEVDGKSRDSVRAFTRM
FIAVPAGNTGLCIVNDELFVRNATTEEIRKAFVMPAPTPSSSPVPTLSAEQQEMLAAFSM
QSGMNLEWSQKCLQDNDWDYGRAGQVFTQLKLEGKIPEVAFLK
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgcgcgtgacgtcacggcgtgcggcggcggggccgcggtcggtcccgggagcggcggcg
atggcggaggaggccaagggggggtacagcgagcacgatgaccgcgtcggcggccgaggc
ttcccgggccgcaggaagaaaggccgaggcccgttccgggggaagatgtacagcgaggtg
aaccaccgctcccgcaaccggggcggctccgggctgcgggcccggttggacgaggacgac
ggcgacgtccccatgagcgaggcccacgacgggcctcggaaccgatacttgccctacggg
ccccggcccaaccgcacggccaacatccacatcacggtgcggcgcgacctccccgccccg
gagcggagcagtggtggcggcggcggtggcggcggcgggaggagccaggatgctagccgg
aggaattggttcaagatcaccatcccctacgggaagaagtatgacaagacgtggctgctg
agctccatccagaacctctgcagcgttcccttcactcccgttgaattccactacgaccac
aaccgagcccagttctacgtggaggacgccaccaccgccagcgcgctcaagcaggtctct
cgcaagatcaccgacagggacaactacaaggtggtgatcattatcaactcgtcggctccg
ccgcagtccctgcagaacgagctgaagccggaggagatcgagcagctgaagctctgtatg
agtaaaaggtacgacggctcgcagcgggctttggacctcaagagcctccgtgtcgatcca
gacttggtgtcgcagagcatcgatgtggtgctgaaccagcggagctgcatgctggttgtg
ctgcgcatcatcgaggaaaacatccccgagctgcaatccctgaacctgagcagcaacaag
ctctaccgcctcgacgacctggccgagttggcacagaaagccgctggcctcaaaatcctc
gacctctctcgcaacgagctgaaatcggaacgggacctggacaaagtgaaggggctcaag
ctggaagagctttggctggacggcaaccccctgtgcgacgctttccgggaccaggctact
tacgtcagctccgtcagagagcgcttcccgaagctgctgcgcctggatggccacgagctt
cctccgcccatcgccttcgacgtggaggcacccacgacgctgcccccctgcaagggcagt
tacttcggctccgacgacctgaaggcgctggtgctgaggttcttacagcagtactactcc
atctacgactcgagtgacaggcaggggctgctcgacgcctaccacgacggcgcctgctgc
tcgctcagcatccccttcgggcaccaaaacccccccaggaacagcctgaacgagtacttc
aaggacagcaggaacgtgaggaagctgaaagaccccaccatgcgcttcaagctgctcaag
cacacgcgcctcaatgtggtggccttcctcaacgagctccccaagacccagcacgacgtc
aactcctttgtggtggacgtctgtgcccagacgaacacgctgctgtgctttgccgtccat
gggatcttcaaggaagtggacggcaaatcccgagactcggtgcgtgccttcacccgcatg
ttcatcgctgtgccggctggcaacaccggcctctgcatcgtcaacgatgagctctttgtt
cgcaacgccaccacggaggagatccgcaaggccttcgtcatgccggcacccaccccttcc
tccagccccgtccccacgctctccgcagagcagcaggagatgctggcagccttttccatg
cagtcaggcatgaaccttgagtggtcccagaagtgcctgcaggacaatgactgggactac
ggccgggctgggcaggtcttcacgcagctgaagctggaaggcaaaatccctgaggtggcg
ttcctcaagtga

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