Anas platyrhynchos (mallard): 119717098
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Entry
119717098 CDS
T02816
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apla03000
]
119717098 (SSRP1)
03036 Chromosome and associated proteins [BR:
apla03036
]
119717098 (SSRP1)
Transcription factors [BR:
apla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
119717098 (SSRP1)
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
119717098 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
119717098
NCBI-ProteinID:
XP_038035715
LinkDB
All DBs
Position
5:complement(54652431..54658688)
Genome browser
AA seq
709 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYRLELAEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKERKKGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEE
TDESFNPVEEDDDVAEEFDSNASASSSSGDGDSDRDEKKPAKKAKIVKDRKPRKKQVESK
KGKDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRK
AEDARRDYEKAMKEYSVGGRSESSKTDRSKKKKKKQEKQMKGKAEKKGAASRSSSSTKSS
AKGLSESFKSKEFVSSDESSSAESKKEDSEEEGGANSPPSSEDSASGSD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgctggagttcaacgagatctaccaggaggtgaagggctctatgaacgac
ggccggctgcggctgagccgccagggcgtgatcttcaagaacagcaagacgggcaaggtg
gacaacatccaggcctcggagctggccgagggtgtgtggcgccgcgtggccctcggccac
ggcctcaagctgctcaccaagaacggccacgtctacaaatacgatgggtttcgggaatcg
gagttcgacaagctgtcggatttcttcaaggcccactatcgcctggagctggcggagaag
gacctgtgcgtgaagggctggaactggggcacggtcaggttcggagggcagctcctgtcc
ttcgacatcggggagcagccggtgttcgagatccccctcagcaacgtctcgcagtgcacc
acgggcaagaacgaggtgacgctggagttccaccagaacgacgacgccgaggtctcgctc
atggaggtgcgcttctacgtgccccccacccaggaggacggcgtggaccccgtggaggcc
ttcgcgcagaacgtcctgtccaaggcggacgtgatccaggccacgggcgatgccatctgc
atcttccgggagctgcagtgcctgacgccccgcgggcgctacgacatccgcatctacccc
accttcctgcacctgcacggcaagaccttcgactacaagatcccctacaccaccgtgctg
cgcctcttcctgctgccccacaaggaccagcgccagatgttcttcgtgatcagcctggat
ccccccataaagcagggccagacccgctaccacttcctcatcctgctcttctccaaggac
gaggacatctcgctcaccctcaacatgaacgaggaggaggtggagaagcgcttcgagggc
cggctgaccaagaacatgtccggctccctctacgagatggtcagccgcgtcatgaaggcg
ctggtcaaccgcaagatcaccgtgcctggcaacttccaggggcactcgggagcgcagtgc
atcacctgctcctacaaggccagctcggggctgctgtacccgctggagcgcggcttcatc
tacgtgcacaagccgcccgtgcacatccgcttcgacgagatctccttcgtcaacttcgcc
cgcggcaccaccaccacccgctccttcgacttcgagatcgagaccaagcagggcacgcag
tacaccttcagcagcatcgagagggaggagtacgggaagctcttcgacttcgtcaacgcc
aagaagctgaacatcaagaaccggggcctgaaggagaggaaaaagggaatgaagcagagc
tacgacgagtacgccgactctgacgaggaccagcacgatgcctacctggagaggatgaag
gaggagggcaagatccgcgaggagaacgccaacgacagcagcgatggctctggggaggag
acggatgagtccttcaaccctgtcgaagaggacgatgacgtggctgaagagtttgacagc
aacgcctcggccagctcctccagcggcgacggcgacagcgaccgggatgagaagaagccg
gccaagaaggccaagatcgtcaaggaccgcaagccccgcaagaagcaggtggagagcaag
aagggcaaagaccccaacgcccccaagaggcccatgtccgcctacatgctctggctgaac
gccaaccgcgagaagatcaagtccgaccaccccggcatcagcatcacggacctgtccaag
aaggctggggagctctggaaagccatgtccaaggagaagaaagaggagtgggatcgcaag
gcagaagatgccaggagggactacgagaaggccatgaaggagtacagcgtgggcggcagg
tccgagagctccaagacggacaggtctaaaaagaagaagaagaagcaggagaagcagatg
aaggggaaagcggagaagaagggcgctgcctccaggtcttcgtcctccaccaagtcctct
gccaagggtctgagcgagagcttcaagagcaaggaattcgtctccagcgacgagagctcc
tccgcggagagcaagaaggaggactcggaggaggagggaggcgccaattccccccccagc
tcggaggattcggcctcgggctcggattag
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