Anas platyrhynchos (mallard): 119717316
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Entry
119717316 CDS
T02816
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla04010
MAPK signaling pathway
apla04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119717316 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119717316 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apla03000
]
119717316 (NFKB2)
Transcription factors [BR:
apla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
119717316 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank
RHD_dimer
Ank_2
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
119717316
NCBI-ProteinID:
XP_038037095
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All DBs
Position
6:17101926..17111565
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AA seq
924 aa
AA seq
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MAMLGLDGLLRPASSSACLDGIDYDDFNFGTHMMEQKEPLMQTVEGPYLIIIEQPKQRGF
RFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYIGMARIEVDLVTHSDPPRVHAHSLVG
KQCNEAGNCVAIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQQKIRNKNSLLTEAEL
REIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIHDSKSPGASNLKIS
RMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRT
PPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVERKRKKVLPQFPQHFG
GGSHMGGAGGGAGGFGSGGGGNLSFPYSPGLAYNSIYSTGPHPVGGYQGGVQMKAPNVDG
DEGDRQVPTESLYCKELQKQAQVCHLWMLALARRNAHALLDYSVTADPRMLLAVQRHLAA
SQDENGDTPLHLAIIHEQTAVIKQLIDVIVSIPSPQIINITNNLQQTPLHLAVITKQPQV
VQLLLQARADPTLLDRYGNSLLHLALHTGDEEMVRTLLAHLGAAAPYLLRLPNFYGLLPV
HLAVKAKSPACLDLLVRKGADVNATEMQGGRTPLHLAVEMENLNMATHLVKKLGADVNSR
TFAGNTPLHLAAGLGSPTLTKLLLKAGADVLNENDEPISPSSSEASSDTDADPEEQEVGM
ELGEPSPATPPAPSPQPDPEQEQEETGPRPRRCHTPLDLTRSQKVRDILLQASQPGPEAE
LPAAPHAGNVLSLDNDALQGLEQLLNQDSSGSDWMELAKRLGLCSLVETYKDTPSPSVSL
LRSYELAGGSLGGLLEALDSMGLRKAVRILRKTEAQEKLQSTEIKEDSAYGSESVEEEQV
PALALKPGPVPAGELPHSQQQQVH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctggggctggacgggctgctgaggcctgcctcttcctccgcgtgcctggat
gggatcgactacgacgacttcaatttcggcacccacatgatggagcagaaggagcccctg
atgcagacggtagaaggcccctacctcatcatcatcgagcagccgaagcagcggggcttc
cgatttcggtatggctgcgaggggccgtcacacggcgggctgccaggagcgtccagcgag
aaggggcgcaagacgtaccccaccgtcaagatctgcaactacatagggatggcccggatc
gaggtggacctggtgacacacagcgaccctccccgcgtgcacgcccacagcctggtgggc
aagcagtgcaacgaggctggcaactgcgtggccatcgtgggacccaaggacatgactgct
cagttcagcaacctgggagtgctgcacgtcaccaagaagaacatgatggagatcatgaag
gagaagctgaagcagcagaagatccgcaacaagaacagcctgctgacagaagccgagctg
cgagagattgagctggaggcaaaggagctgaagaaggtgatggacctcagcatcgtgcgg
ttgcgcttcaccgcctaccttcgtgacagcagcgggaacttcacgctggccctgcagccc
gtcatctcggaccccatccacgacagcaagtcccccggggcttccaacctgaagatctcg
cggatggataagacggccggctcggtgcggggcggggatgaggtctacttgctgtgcgac
aaggtccagaaagatgacatcgaggtgcgcttctacgaggatgacgagaacggctggcag
gccttcggggacttctcccccacggacgtgcacaagcagtatgccatcgtcttccgcacg
cccccctaccacaagcccaagatcgaccgtcccgtcaccgtcttcctgcagctgaagcgg
aagcgagggggggacgtgagcgactcgaagcagttcacctactaccccgtggtggaagat
aaggaggaggtggagaggaagcgcaagaaagtcctgccccagttcccccagcactttggt
gggggctcgcacatggggggagccggtggcggcgccgggggcttcggatcaggaggaggt
gggaacctcagcttcccctactcgcccgggctggcgtacaacagcatctactcgaccggc
ccgcaccccgtgggggggtaccagggtggcgtgcagatgaaggcccccaacgtggacggg
gacgagggcgacaggcaggtgcctacggagagcttatactgcaaggagctgcagaagcag
gcccaggtctgccacctctggatgctggccctggcgcgccgcaacgctcacgccctgctc
gactactcggtcacggcagacccccgcatgctgctggctgtccagaggcacctggccgcc
tcgcaggacgagaacggggacacgcctttgcaccttgctattatccatgagcagacggct
gtgatcaagcagctgatcgacgtgatcgttagcatccccagccctcagatcatcaacatc
accaacaacctgcagcagacgccgctgcacttggccgtcatcaccaagcagccccaggtg
gtgcagctcctgctgcaagcccgtgcagaccccaccttgctggaccgctacggcaattcc
ctgctgcacctggcgctccacacgggcgacgaagagatggtgaggacgctgctggcccac
ctgggagcagctgccccctacctgctgcgcctgcccaacttctacggcctcctgcccgtg
cacctggccgtgaaggcgaagagcccggcctgcctggacctgctggtcaggaagggggca
gacgtgaacgccacggagatgcagggcgggaggaccccgctgcacctggccgtggagatg
gagaacctcaacatggccacacacctggtgaagaagctgggagcagacgtcaacagccgg
accttcgctgggaacacccccctgcacctggcggctggcctgggctcccccacgctcacc
aagctgctcctcaaagcaggggccgatgtgctgaacgagaacgacgagcccatcagcccc
tcctcgtcggaggcgagcagcgacacggatgctgaccccgaggagcaggaggtgggcatg
gagctgggggagccgtccccagccacgccgcctgcccccagcccccagcccgaccctgag
caggagcaggaggagacagggccccgaccgcgccgctgccacacgccgctggacctgacc
cgcagccagaaggtgcgggacatcctgctgcaagcctcccagccgggccccgaggcggag
ctgcccgctgccccccatgcagggaacgtcctgtccctggacaacgacgcgctgcagggc
ttggagcagctgctgaaccaggacagcagcgggtccgactggatggagctggccaagcgg
ctggggctctgcagcctggtagagacctacaaggacaccccctcgcccagcgtcagcctg
ctgcgcagctacgagctggccgggggcagcctgggggggctgctggaggcgctggactcc
atggggctgcgcaaggccgtcaggatactgcgcaaaaccgaggcgcaggagaagctgcag
agcacagagatcaaggaggatagcgcctacggcagcgagtcggtggaggaggagcaggtg
cctgccctggccctgaagccagggccggtgccagccggtgagctgccccacagccagcag
cagcaggtgcactga
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