Anas platyrhynchos (mallard): 119718384
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Entry
119718384 CDS
T02816
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-C2-like
KO
K16499
protocadherin delta 2
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
apla04515
]
119718384
Cell adhesion molecules [BR:
apla04515
]
Cadherins
Protocadherins
119718384
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PliI
Motif
Other DBs
NCBI-GeneID:
119718384
NCBI-ProteinID:
XP_038042553
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Position
14:12958351..12961219
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AA seq
684 aa
AA seq
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MPRGRALPWQLPLLLAAFSSLQPPGSAQLRYSVPEDREPGSPVGDVAKDLGVEVRSLAAR
NLRLVSEGERRHFQVDLVAGVLLLDSRLDREALCGQSPECSLHLQLVLENPLQLHRVEVD
VLDVNDNAPQFPKPVVALEITEVANPGTRLPLEVQEDPDMGSNSISTYELSPSEHFALSI
NVRGDGVKMPEIVLEKALDREKVAVHHLTLTALDGGNPVKSGTAKVTIHVLDANDNPPVC
DPPISKVYLEENVPVGTLVTKLNVTDLDEGPNGDVEYSFKTSNNAPGKFTRLFTLDPRTG
EIRTKAPLDYEESSAYEIAVRARDKGSPAMEGHCHLRVELIDINDNSPEIVLTSLSSPVQ
EDATPGTVIALIGVKDSDSGDNGQVRLQIAKELPFKLVSSFKEHFSLVTNGPLDREKASG
YNITVRATDSGSPPRATQKTFYLQIADINDNAPNFSTPFDTAHVQENSLPGTSVFSVSAS
DPDEGSNAKLSYSILDSGMQDIPISSYFRIDPDNGTIYTVRALDYEQDKMFQVPVEVKDA
GSPALSSTAVVHVFILDQNDNAPTIVYPSVPKGSAFHQTIPSVAEPGYLVTKIVAVDADS
GHNAWLSYQLQETAEAVPFLVERRSGEIRVAEALRETEVPHRLVVEVRDNGTPSLSASVV
IVVSPEEDWRAGLCQVLGPPQIFS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggggccgggctctgccatggcagctcccgctgctactcgcagccttctccagc
ctgcagccgcccggcagcgcccagctccgttactccgtgcccgaggaccgagagccgggc
tcgccggtgggcgacgtggccaaggacctgggggtggaggtgcggagcctggcagctcgc
aacctgcgcctggtgagcgagggtgagcggcggcatttccaggtggacctggtggctggc
gtgctgctcctcgacagccggctggaccgcgaggcgttgtgcgggcagagccccgagtgc
tcgctgcacctccagctcgtcctggagaatcccctccagctccaccgcgtcgaggtggac
gtcctcgatgtcaacgacaacgcgccgcagttccccaagccagtggtggccttggagatc
actgaggtggccaaccccgggactcggctgccactggaggtgcaggaagacccggatatg
ggctccaactccatctccacctatgagctcagccccagcgagcattttgccctgagtatc
aacgtgagaggggatggcgttaaaatgcccgagattgtactcgaaaaagcactggataga
gaaaaagtggctgttcatcacctaacactgacagccctggacggagggaatccggtgaaa
tctggcactgcaaaggtcaccatccacgtcctggatgcaaatgacaatcctcctgtttgc
gacccacccatatccaaggtatatctggaggagaacgtgccagtgggcactctggtcacc
aagctgaatgtcaccgacctggatgagggtcccaacggggatgtggagtattctttcaaa
accagcaataatgcacctggtaaattcaccaggctgttcaccttagatccccggacaggg
gagatcagaaccaaagccccgctggattatgaggaatccagtgcttacgagattgcggtt
cgagcccgggacaaggggtccccggccatggaaggacactgtcacctgcgagtggaatta
attgatatcaatgataacagcccagagattgtcctgacctcgctctccagcccagtgcag
gaggatgcgaccccaggaacagtgattgcccttattggtgtcaaggacagtgattctggt
gacaacgggcaggtccgtctgcagatagcaaaagagctcccatttaaactggtgtcatct
tttaaagagcatttctcactggtcacaaatggtccccttgatcgggagaaggccagtgga
tacaacatcactgtgagggctacagattcagggtccccacctagggccacacaaaaaacc
ttctatctccaaattgccgacattaatgataatgcaccaaacttctctacccctttcgat
acagctcatgttcaggaaaactctcttcctggaacatctgtcttttcagtgtcggcatct
gatcctgatgagggtagtaatgccaagctgtcttactccatcctggacagtggcatgcaa
gacatacctatctcgagctattttcgaatagacccagacaacggtactatctataccgtg
cgggctctggactatgagcaggacaagatgttccaggtgcccgtggaggtgaaagatgct
gggtctcctgctctgagcagcactgctgtggtccacgtgttcatcctggatcagaatgac
aacgcccccaccattgtctacccatccgttcccaagggttctgccttccaccaaaccatc
ccctccgtggcagaacccggctatctggttaccaaaattgtagctgtggacgccgatagt
ggccataatgcctggctgtcctaccagctgcaggagaccgctgaagctgtgcctttcctc
gtggaacgccgctcgggggagataagggtcgcagaggctctcagggagacagaagtcccc
caccggctggtggtcgaagtgagggacaatgggacaccgtccctctcggcctctgtggtg
atagtcgtttctccagaggaagactggcgtgcaggactttgccaagtccttggacctccc
caaatcttctcctaa
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