Acanthaster planci (crown-of-thorns starfish): 110973155
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Entry
110973155 CDS
T05078
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110973155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110973155
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110973155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110973155
NCBI-ProteinID:
XP_022079421
UniProt:
A0A8B7XGS1
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MKMAADFKTAQPVEYYRKFLKEDIRPDGRELGEIRPTILNVGSITTADGSALVKLGNTTC
ICGIKAEFCTPKEDLPKCGIVVPNVDLPPLCSSRFKPGPPSEQAQVVTQLLADVINNAKS
IDLESLCIVEAKLCWVLFCDIVCLDYDGNIVDACLVALVAALRNVLLPEVTIEEDSQLPV
TSSDKTVSLSIHNTPVATTFAIFDESVLLADPTNEEESIATGEVTIVMTEDGRLQAVHKP
GGSPLSPDQLQDCITRTQTRSEDVRRLIQDTIDSVER
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggccgccgattttaagactgctcaacctgttgaatactacagaaaatttctt
aaagaagatattcgtcctgatggtagggagctaggggaaatccgtccaaccatcctaaat
gttggttccataaccactgcagatggctcagcactggttaagcttgggaacacgacctgc
atctgtggcatcaaggctgaattttgtacgcctaaggaagatctgccaaagtgtggcatt
gtggtcccaaatgtggatttacccccgctgtgttcctctcgcttcaagccaggccctccc
agtgaacaagctcaggttgttactcagctgcttgctgatgtcatcaacaatgccaaaagc
attgatttggaatcgctctgcattgtggaagcaaagttgtgctgggtgctgttctgtgac
attgtttgtcttgactatgacgggaacattgtggatgcctgcctagtggcactcgtggct
gccctcagaaacgtgttgctgccagaggtgacaatagaggaagactcacagctcccagtc
acgtcatcggacaaaacagtttctcttagcatccacaatacacctgttgccaccaccttt
gccatctttgacgagtctgttttattggccgatccaaccaatgaggaagagagcatagca
acaggtgaggtgacaattgtcatgacagaggatggacggctacaagcagtccacaaacca
ggaggaagcccactgtcgccagaccaacttcaagactgcattacaagaactcagacaaga
tccgaagacgtacggaggctgatacaagatacaatagacagtgtggaaagatag
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