Acanthaster planci (crown-of-thorns starfish): 110973187
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Entry
110973187 CDS
T05078
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110973187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110973187
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110973187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
110973187
NCBI-ProteinID:
XP_022079496
UniProt:
A0A8B7XH05
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MSRFGTSFGGQSTSSSTTKPAFGFGAPSTSQTGFAFGAAKTTAPTFSFGTTTTATTTTAA
TGFGFGSTGGFGTSTTSAAGSAFGFGSTAPTTSSTGFGFGTGFGGFGATKTTASSLFGGF
GTNTSTTSSGFGLGGTSTSTGFGGFGTGLGGGLSTGFGTQQQQQQPQQGVGADLMSISSA
LLMPTIYGDERDAIIAKWNQLQAFWGTGKGYINQNSSVPFTPENPFCRFKTVGYSVKPTS
KDEDGLVILHFKKKEEEIRSLQQQLVDALFKILGSKPTLSVCVEDVKQLPDDKTEVIIYI
QERSPTGLTRRIPASTAFGFFSQANIKTQLGSLGVVDMVPKLALSEAQIDAYLSTPPLGY
DPRLWRQAKLDNPDPEKLVPVPMVGFHTLKSRLENQEQQTKQHQARLDMINQDTETLQHK
QTTIQAKIAEYKRRHLELSHRVLRILVRQETQRKAGMAIQTEEEQLRTRLEGLQAELNAP
TQMKGRLNEMMSQIRLHSHLPPGRGSEQYALATEMQQEIRQHLKHQQEGLSHLIATIKSD
LQDLKLIEQGLQETTSQR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggtttggcacatccttcggtggacagagtactagcagtagcaccaccaaacct
gcatttggttttggggcgccatcgacatcgcaaacaggttttgcttttggtgcagccaag
acaactgccccgactttctcctttggcaccaccacgacagcaaccacaacaacagcagct
acaggcttcgggtttggcagcaccggcgggtttggaacctccaccacctctgccgccggt
tcggcatttggatttggctcaacggctcccacaacgtcaagcacaggatttggatttgga
actggattcggaggctttggagcaaccaagaccacagcttcttccttgtttggtggtttt
ggcaccaacacaagtaccaccagcagtgggtttggtctagggggaacatctacgtccaca
gggtttggtggttttggcacgggtttaggaggtggactgtccacaggttttggcactcag
caacagcagcagcaaccacagcaaggagttggtgcagacttgatgagcatatccagtgcc
ttgttgatgcccaccatctatggagacgagagggatgcaatcattgctaagtggaaccaa
ctccaggcattctgggggacaggcaagggctacatcaaccagaacagctctgtgcccttt
acgccagaaaatcctttctgcaggttcaagacagttggctacagtgtcaaacccacatca
aaggacgaggacggactggtcattctgcacttcaagaagaaggaggaggaaatccgcagc
ttgcaacagcagctggtggacgcgctcttcaaaatcctggggagtaaacccaccctgtct
gtgtgtgtggaggacgtgaaacagctgccagatgacaagactgaggtcatcatttacatc
caggagcgatctccgaccggtctgaccaggcgcattccggcctccactgcctttggcttc
ttcagtcaggccaacatcaagacccagctgggtagcctgggcgtggtggacatggtgccc
aagctggcgctatccgaggcgcagatcgatgcctacctgagcactccacccctaggttat
gatcccaggctgtggagacaagctaagcttgacaacccagatccagaaaaactggtaccc
gtgccgatggttggttttcacaccttaaagagccggttggaaaaccaagagcaacaaacc
aaacagcatcaggcgagattagacatgatcaaccaagacaccgagacgctgcagcacaag
cagaccaccatccaagccaagatcgccgagtataaacgacgccacctggagctgtcgcac
cgggtactacgcatcctggtcaggcaagagacccagcgtaaggcgggcatggctatccaa
accgaagaggagcagctgaggaccagactagaagggctgcaggcagagctcaacgcaccc
acgcagatgaaggggcggctgaatgaaatgatgtcacagatccgattgcacagccatttg
ccaccaggtcgggggtccgagcagtacgcattagccactgaaatgcagcaagaaatccga
cagcatctgaagcaccaacaggaaggtttgagtcacctcatagcgaccatcaagagtgac
ctccaagacttgaaactcatcgaacagggcctgcaagagaccacatcccagcgatga
DBGET
integrated database retrieval system
