Acanthaster planci (crown-of-thorns starfish): 110973380
Help
Entry
110973380 CDS
T05078
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110973380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110973380
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110973380
Spliceosome [BR:
aplc03041
]
Complex C
Other components
Step II factors
110973380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_16
nSTAND3
AAA_30
PhoH
DUF4778
Presenilin
TsaE
Motif
Other DBs
NCBI-GeneID:
110973380
NCBI-ProteinID:
XP_022079861
UniProt:
A0A8B7XI11
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MEELDKLEYLSLVSKVCTELDNHLGMNDKDLGKCNIHLHDXYCFSSALQKNGADLPQSFV
SNLLRLIQHMRPPKQAKTANEAKEKKPKVSELDKRRKKYPGLCLPDKKGEVETDEKVAQD
AMDELEALMPLAKMPIKTEKSEDVKTHKKKKNRHHRRSRSRSRSRSSSHDRDRARERRKR
RSWSKSRSRSRDRDRRRRSRSDSRERDSGKDRKHRRKRDRSRDRNRDRDWDKHKDSGSHA
DRFVNRPPPMDPEVGCIYDGKVTSVMQYGCFVQLEGLKRRCEGLVHISELRREGRVADVN
DVVTRGMKVKAKVLSLAGTKIRLSMKDVDQDTGRDLNPMMSKGLAGSSNPEADDALRNPD
RPSNLPLVSVPETDDVSIRKRVQRTTSPEKWELKQMMAANCIDVTELPDFDETTGVLAKE
DDSDEEIEIELREEDPPFLQGHGRQSVELSPVRIVKNPDGTLSKAAMMQSALAKERREMK
QAAERAESENIPTGMNKNWIDPMPDSERALVANVRNMGFTNQDMPEWKKSAFGGNKASYG
KRTKMTIMEQRESLPIFKLKEQLVQAVLDNQILVVIGETGSGKTTQITQYLAEAGYTVRG
KIGCTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSPETKIKYMTDGMLLRECL
IDSDLTQYAIIMLDEAHERTIHTDVLFGLLKKAVKKRSDLKLIVTSATLDAVKFSQYFFE
APIFTIPGRTFPVEILYTKEPEADYLDASLITVMQIHLTEPPGDVLLFLTGQEEIDTACE
ILFERMKSLGPEVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGI
YYVVDPGFVKQKVYNSKTGMDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDE
MLTTAVPEIQRTNLASTLLSLKAMGINDLLAFDFMDAPPTETLITAMEQLHSLSALDDEG
LLTRLGRRMAEFPLEPMLSKVLIMSVHLGCSEEILTIVSMLSVQNVFYRPKDKQAIADQR
KAKFQQPEGDHLTLLAVYNSWKNNKFSNPWCFENFVQARTLRRAQDVRKQLLGIMDRHKL
DVVTCGKNTARVQKAICSGFFRSAAKKDPQEGYRTLVDSQIVYIHPSSALFNRQPDWVVY
HELVLTTKEYMREVTTIDPRWLVEFAPSFFRVADPTKLSKHKKQQRLEPLYNKYEEPNSW
RISRQRLRRN
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactggacaagcttgaatatctctccctggtatccaaagtctgtaccgagttg
gataaccatcttgggatgaatgataaagacctaggtaagtgtaatatacatttacatgat
tgatactgtttttcatcggccctccaaaaaaatggcgccgatctgccccagtcatttgtc
tccaacctgctgcgtctcatccagcacatgaggccgcccaagcaggccaagacagccaac
gaggccaaggagaaaaagcccaaagtcagtgaactggacaagcggcggaagaaatacccg
ggcctctgcctaccggataagaagggagaagtcgaaacggacgagaaagtggcgcaggac
gcgatggacgagctggaggcactgatgcctttggccaaaatgccaatcaaaaccgagaag
tctgaggacgtgaagacacacaagaaaaagaagaatcgacatcacagacgtagccgtagc
cgcagtcgcagcaggagttcaagccacgacagggaccgggccagggagagacgcaagagg
cggtcgtggtccaaatcacggtcgcggagtcgggaccgggaccggcggcgccgcagtcgc
agtgacagtcgggaacgggacagcgggaaagatcgcaagcacagaaggaaaagggacaga
agcagggaccgcaatcgggaccgtgactgggacaagcacaaggacagcggcagccacgcc
gaccgctttgtcaaccggcccccacccatggacccggaggtgggctgcatctacgacggg
aaagtcaccagcgtcatgcagtatggctgttttgtccagctggagggccttaaacgcaga
tgcgaggggcttgtgcacatctccgagctgcgccgcgaaggacgagtggcagatgtcaac
gacgtggtgacccggggcatgaaggtcaaagccaaagtcctatccctagcagggaccaag
atccggctgtccatgaaagatgttgaccaggacacaggcagggacctcaatccgatgatg
tccaagggtctcgccggctcctccaacccggaagcggacgacgccctgcgcaatcccgac
cgcccctccaacctgcccctagtctcggtgccggaaaccgacgacgtcagcatccgcaag
cgggtccagcgcactacctcgcctgagaagtgggaactgaagcagatgatggcggcgaac
tgtattgatgtgaccgagctcccagactttgatgagaccacgggcgtcctagctaaggaa
gacgactcggatgaggagattgagatcgagctgagggaggaggacccgcccttcctgcag
ggccacggccggcagagcgtcgagctcagccctgtccgaatcgtcaaaaacccagacgga
acgttgtccaaggctgccatgatgcagagcgccctcgccaaagagcgtcgagagatgaag
caagcggctgagcgtgccgagagtgagaacatcccaacgggaatgaacaagaactggatc
gatcccatgccagacagcgagcgcgccttggtggccaatgtgcgcaacatgggattcacc
aaccaggacatgcctgaatggaagaagagcgcgtttggcggcaacaaagcgtcgtacggt
aaacgcaccaagatgacaatcatggagcaacgtgagagtctgcccatcttcaagctgaag
gaacaacttgtgcaggccgtgctggacaaccagatcctggtggtcattggggagacgggc
agcggtaagaccacccagatcacccagtacctggccgaagctggctacaccgtccggggg
aagatcggctgcacccagccccgccgcgtggctgccatgtccgtggccaagcgagtgtcg
gaggagtttggctgccggctgggtcaagaggtgggctacaccatccgttttgaggactgc
acttccccggagaccaagatcaagtacatgacagacggtatgctactcagagagtgcctg
atcgactcggacctcacccagtatgccatcatcatgctggacgaggcccacgagcgcacc
atccacacggacgtcctctttggcctgctcaagaaggccgtcaagaagcgcagcgacctg
aagctgatcgtaacctcggccacgctcgacgccgtcaagttctcccagtacttcttcgag
gcgccaatctttacaatcccgggccgcaccttccccgtggagatcctatacaccaaggag
ccagaggcagactacctggacgcctccctcatcacggtcatgcagatacacctgaccgaa
ccgccgggagatgtgctgttgttcctgactggtcaggaggagatcgacacggcctgcgag
atcctctttgaaaggatgaagtccctgggtccagaggtaccagagctgatcatcctacca
gtctattccgccctgcccagcgagatgcagaccaggatatttgacccagctcctccgggg
agcaggaaggttgtcatagccaccaacattgccgagacctcactgaccatcgacggcatc
tattacgtggtggatccaggctttgtcaagcagaaagtctataactccaagaccgggatg
gaccaacttgtcgtcactccgatatcgcaggctcaggccaagcagcgcgcgggccgcgcc
ggccgcacgggccccggcaagtgctaccgcctctacacggaacgggcctaccgcgacgag
atgctgaccaccgccgtgcccgagattcagcgcaccaacctggccagcacgctgctctcc
ctcaaggccatgggcatcaacgacctgctggccttcgacttcatggacgctcccccgacc
gagacactcatcacagccatggagcagctgcactcgctcagcgcactggacgacgagggc
ctgctgaccagactcggacgcaggatggcagagtttcctctagagcccatgctgtccaag
gtcctgatcatgtccgtccatctgggatgtagtgaagagattttgaccattgtctccatg
ctgtctgtgcaaaatgtcttctacagacccaaggacaagcaagcgattgccgaccagcgt
aaggccaagttccagcagcctgagggggaccacctgaccctgctggccgtctacaactcc
tggaagaacaacaagttctccaatccctggtgcttcgagaactttgtgcaggcgcggacg
ctgcggcgggcccaggacgtcaggaagcagctgctaggaatcatggatcggcacaagttg
gacgtcgtgacgtgcggcaagaacacggcccgagtacagaaggccatctgcagcggtttc
ttccgcagcgccgccaaaaaggatccgcaagagggttatcgtactttagtggacagccag
attgtctacatccatccatccagtgcacttttcaaccggcaaccagactgggtcgtctac
cacgagctggtcctgaccaccaaggagtacatgcgggaggtgaccaccattgacccccgc
tggctggtggagtttgccccttccttcttccgggtggccgaccccacgaagctgagcaag
cacaagaagcaacagcgactggagccgctctacaacaagtacgaggagcccaactcctgg
cgaatctcccgccagcggctgcgacgaaattag
DBGET
integrated database retrieval system
