Acanthaster planci (crown-of-thorns starfish): 110973539
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Entry
110973539 CDS
T05078
Name
(RefSeq) ATP-dependent RNA helicase DEAH12, chloroplastic-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110973539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110973539
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110973539
Spliceosome [BR:
aplc03041
]
Complex C
Other components
Step II factors
110973539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
IBR
Helicase_C
OB_NTP_bind
DEAD
RBD_DEAH11
HA2_N
KH_DEAH11
RRM_DEAH11
ResIII
IBR_1
zf-RING_11
zf-RING_2
SNaCT8
DUF6376
AAA_22
Hemocyanin_M
AAA_29
IBR_2
Motif
Other DBs
NCBI-GeneID:
110973539
NCBI-ProteinID:
XP_022080113
UniProt:
A0A8B7XH37
LinkDB
All DBs
Position
Unknown
AA seq
2438 aa
AA seq
DB search
MAEAQPKMDYSLHSPTLDDLLFIPSNDSGSDKEKMMEDDNKKDKDGDDGDEDGGTEASED
EDDEDGRGESTMLQVCGLNSGMTQSVLKSYVSEQIQGLKEMEELFVEKDTLPQTQTVILH
FESLETAQSACSVLSKCPLGPGGDLIKVEILDTTETQQDLATEQKNPTRKAADKPKKRQP
RARQWRQKDKTLKKIPAIGGGLDAASSATLEVNNVSIKKEEFEKLLSQLKIESQSLVWKP
PPQIGSVFLQFESKQEAATSQRILNNISVGAANKKLVAKLVQPKQKNGKESGKVPGRAPS
SSQPLQTSPASISTNRDEKYNRQDSSRKYSKGGHIGVSWQRPNPPDGTWFKSSDGRRHSQ
DGGQRGPSKIPPQMEVPIQPSGYGQRERRSVGDDEDRKSTVLDASNTSASTFTTSIEVTN
IHPNVMEAGFRLFLHDKKIPYIKLEFVTSPKQEKWAVLYFATTRDTAQSRKFLDKQWIVP
GGPKLRANFTVASNTNDYPPTADGEDRPNCLIKGTSGGPPRHPCGGGNRGGGGRSRSRNR
PRKDDADSDRFSESSEAMSTASRKSFSSSTRGGRHHVKSLSLYITNIGNDCDKEEFCDFL
RSFDLQCECSEFGQTKNKAQFAVIHFPDCKKAAEAKKVLDQDEWLLGGNTPLKVSFFRPR
QASTRRQDSLVKQLSQLPVDNDESQRNVQKWLEGQTGPETSDQNSKQNIPPTRPVKSGNI
NLPLKKRESNPNEVVITDLPRDIFETDVADILTKEDCQGFIDVRLIKNKVSRTGTGECFI
TFRERKHAMEAVLKLYGRSIHDHRCEVRLSVNHDQMEPAIARKTLATFQEKEMPEKVKDI
QSAIEKKIEKIEADIKELEDTLEENQSFAQLEHSESSIEALRHQLNEQDRYLEEFKRACR
SVDIRVKHLQVKDVIALHDVQKIRHRFERECRRAESPLPVYGYRSDIQRKIQENMAFVLQ
GETGSGKSTQIPQYIVDMELQGHQDDCDTATGGGQQWRVVCTQPRRVAALTLAKRVAEEY
GCRVGEEVGFVVGNKKSVNKSSTVVTFMTDRKLLNVCMADPKLSEYSCVIVDEAHERSVD
TDILLATLKKLLMKRRDLHLIVMSATIDINLFTTYFGGCAQLSVPGRTFPVDKHWCGDNL
GIGEGDYLKKAIEQAAKVHKKEGPGDILVFLTSVNEIERACRDLATILGQNAANEDGPVL
ILPLHGRLQPEDQMKVFKETRPDQRKIVFATNVAETSVTIKGIKYVIDTGVVKECQYDPK
RSMSLLKVTTITKASAQQRAGRAGRTAPGVCYRLYTKEEYGELEETMKPEILRVHLGMAA
LQLLELGVEDVANFDFIEAPDQEATRQAMITLRLLGAVDKSSKLTPLGKKMATLPLEPRL
SKLVLEGVERGLVTEAVVLAALISAPGSIFYRGGSDKDKDTADQLKLKFCHKSGDIITML
TAYSQWNDQPEKQRKSWCMANSMNSKTLNAVKDTVQEVRQVLKKEHKVDSDYSKMKIPDK
AKSETLQKVIMAGYFQTLSLYNGHHRAGYTVLPQQKSGHVHPSSALKALGINPTWVVYEE
FKRTSRDFLFNVTQVEISWLEEVAPVFYHEIDLKALKDMAMIELSPIPLGTALMRQLTVK
RNEKLRALEEKITAEQDSSCIIEVNRSTKHLQMFVNKQCSSFATSHVKGFLDDECKMIER
QQVEVPVGDSGVVRQVVVAGAETKFILMAKDYRTLEISNMPDDATDDDVERIIRFAGCSR
QEILDVYRFPPQTPMAKAGKWGRVTFISPEAAQDAKEWLDVAVAAEETTLTARPMQGRGF
QRPDIRRVNTRLVITWFTWPSKGHAFVNCETTVEAMDLRLAVTGVHLKGRILLCNTTKKD
SRAVFIKNVHPDATQDDLERAIKRKTAIPFKRCSIARQEPTGHIPTPEEVTNDIYTMFDG
AVEQQDMNVNVLPVRSEKTQMQKAIVTFSGDNEGQVDARVAELQQNPRRNSAGQVYHAKI
TASCMLFCRPEVYSCLEEEIQRLVETAKTEKEGLSIRVNKSRKTSDWVISIASGKIEDVQ
TVRRSLLVYVQGETVPLSDLYHSVTSYQKKTKLLEMLQKALQHLLQDLDAYATVDGRRQA
VVFFGKDQIRERLKRRFRDYTEIVCNQMLREIPLTASVSPHCTKGRAIRALVKAYGPWLK
DLQEKSGASIVMNTKLGVLLIEGNQKVFDKVHGMVYNCLKEAGLEEAISNEAQQPCEDIE
CGVCYTSIDSSDEVYRLSACSQAHGFHQECLIEMFKVRLKDSSKDYPIECPSEGCGQAML
LCDIRILCPEEDKRLRLYQLALEAHVAQRSDGKLKFCPTADCCMIYRHTEDAQTFVCPEC
RARLCSSCAAEPHPGQTCEQFKKLGKTFDDIKEWIKETGADAKMCPVPNCGYVIEKISGC
HHMTCLGCGKHICWMCLQYFNTGRACYGHLQQVHGNFV
NT seq
7317 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcgcaacccaagatggattatagtctacattccccaacactagatgatttg
ttgttcatcccgtctaatgactctgggtcagacaaagagaagatgatggaagatgacaac
aagaaggacaaagatggtgatgacggggacgaagatggaggaacagaagccagtgaagat
gaagacgatgaagacggaagaggagaaagcacgatgctgcaagtgtgcggactaaactct
gggatgactcagtcagtgctaaaaagctatgtcagtgagcagatacaaggcttaaaggag
atggaggagctttttgtagagaaagacaccctgccgcaaactcaaacagtaattcttcac
tttgagtcattggaaactgcccaaagtgcctgcagtgttttatcaaagtgccccttgggt
cctggtggggatctcatcaaggttgagattcttgacacaacagaaacccagcaagatctt
gctactgaacaaaagaatcccaccaggaaagcagctgacaagcccaagaaacgacagcca
agggcacggcaatggaggcagaaggacaagacattgaaaaagataccagcaatcggcggt
ggtcttgatgcagcatcgtcagccactcttgaggttaacaatgtcagcatcaagaaagag
gagtttgagaagcttttgtctcagctaaaaatagaatcacagagcttggtttggaaaccg
ccaccccagataggctcagttttccttcagtttgaaagcaaacaggaagcagccacttct
caacgaatcctgaataacatctctgtcggtgctgccaacaagaaactggttgctaaatta
gtccaacccaaacagaagaatggcaaggagtcagggaaggttccaggtagagcaccatct
tcttcacagccacttcaaacaagccctgcctcaatctcaaccaacagagatgagaagtac
aacagacaggacagcagcaggaaatactccaaggggggacacattggggtttcttggcag
cgacctaatccaccagatggtacctggttcaaatcatctgatggtcgcagacattctcag
gatggtggacagcgaggtcccagtaaaattcccccacagatggaagtacctatacagcca
agtggatatggacaaagagaacgtaggtctgttggtgatgatgaagacaggaagagcact
gtattagatgcaagcaacaccagtgcatccacatttacaacatccatagaggtgactaac
atccacccaaatgtaatggaagcaggctttcggctgttcttacatgataaaaagatccct
tacataaagcttgaatttgtcaccagtccgaagcaggagaaatgggcggtcctttatttt
gctacaaccagggacactgcacagtcaagaaagtttcttgacaaacagtggattgtacct
ggtggcccaaaacttcgtgccaattttaccgttgcatccaacacaaatgactatcctccg
acagctgatggtgaagatagacccaattgtctgatcaaaggtacatctggaggacctcca
cggcacccctgtggaggaggcaacaggggtgggggagggagaagtagatctagaaacaga
ccaaggaaagatgatgctgactcagacaggttctctgaaagtagtgaagccatgagcact
gcatcaaggaagagttttagcagctctactcgtggaggaaggcatcatgtaaaatcattg
tctctctacatcacaaatatcgggaatgattgtgacaaggaggaattttgtgacttccta
aggtcttttgacttgcagtgtgaatgttcagagtttggtcaaactaaaaacaaggcacag
tttgctgtcattcacttcccagattgcaagaaggcagccgaggctaaaaaagttctggat
caagacgagtggttgcttggtggcaataccccacttaaggtcagtttcttcagaccaagg
caagcctctacaagaaggcaagattccttggtaaaacaactcagccaacttccggtggac
aatgatgagagccagagaaatgtacagaagtggctggaaggacaaacaggtcccgagaca
agtgaccagaacagtaaacaaaacatacctcccaccaggcctgtaaaatctggaaatatc
aatttgccacttaaaaaacgagagtcaaatccaaacgaagtggttataactgatcttcca
agagatatttttgaaactgatgttgctgacatcttgacaaaagaggactgccaaggtttc
atcgatgttaggctaataaagaataaggtttccagaaccggtactggtgagtgcttcatt
acgttcagagagaggaaacacgcgatggaggcagtgctaaaactttacggtagatccata
catgaccatcgttgtgaagtgcgtttgtctgttaatcatgatcagatggaaccagccatc
gcccgcaaaacccttgctacattccaagagaaggaaatgccagagaaggtcaaggacatt
caaagtgctattgaaaaaaaaattgagaaaatcgaagcagacataaaagaacttgaagat
actctggaagagaatcagtcctttgctcagttagaacatagtgagagttcaatcgaagca
cttagacatcagttaaatgaacaagataggtacttggaggagtttaaaagagcatgcaga
agcgtggatattagagtgaaacacttgcaggtaaaagacgtcatagctttgcatgatgtg
cagaagattcgccaccgctttgagagagaatgtcgccgtgccgaatcccccctgccagtc
tatggctaccgatctgacatccagaggaagatccaggagaacatggcctttgtcttacaa
ggggagactggatcagggaagagcacccagattcctcaatatattgtcgatatggaactg
cagggtcatcaagatgactgcgacactgccactgggggagggcagcagtggcgggttgtg
tgcacgcagccacgccgggtggcagctctgactcttgctaagcgtgttgctgaagagtat
ggctgccgggtgggagaggaagttggtttcgtggtggggaacaagaagtccgttaataag
tccagcacagtggtgactttcatgacagaccgaaaattgctcaatgtatgcatggcagat
cccaaactatcggaatactcctgcgtgattgtggacgaggctcacgagcgatctgttgac
acagatatcctcttggcaaccttaaagaagctgttaatgaagcgacgtgatctccatctt
attgtcatgtcagctacgattgacatcaacttatttaccacctactttggtggatgtgcc
caactgagtgtgccaggccgcaccttcccggttgacaagcactggtgtggggataatctc
ggcattggcgaaggtgactacctaaaaaaggccatagagcaagctgccaaggtgcataag
aaagaaggcccaggggacatcctcgtgtttttgacctccgtcaacgagattgagagagca
tgcagggatcttgcaacaattcttggccaaaatgctgccaacgaagatggtccggtgctc
atcctacctctgcacggacgacttcagccagaggaccaaatgaaggtctttaaagaaaca
agaccagaccagcggaagattgtctttgccacaaacgtcgccgagacatcagtcaccatc
aagggtattaaatacgtcattgacacaggggtggtgaaggagtgtcagtatgacccgaag
cgcagcatgagccttctgaaagttaccacaataaccaaagcatcagctcagcagcgggca
gggcgggcggggcgaactgcacccggggtctgttacaggctgtacaccaaggaggaatat
ggcgagcttgaggagacaatgaaacctgaaattctgagggtgcatctggggatggcggcc
ctacaactcttagagctgggtgtggaggatgtggcaaacttcgacttcattgaagcacca
gatcaggaggccacgaggcaagctatgataaccttgaggctcttgggtgccgtggacaag
agtagcaagctgaccccactgggaaaaaagatggctacactgccgttagaaccacgcctt
tccaagctggttcttgaaggggtagaaagaggtttagtcacagaagctgttgttcttgca
gcattgatttctgcacctggaagcatcttctaccgaggaggttctgataaagacaaagac
acagcagaccagctgaaacttaaattctgtcataaaagtggtgatatcatcacaatgttg
actgcctacagtcaatggaatgaccaaccagagaagcaacggaagtcttggtgtatggcg
aacagcatgaattcaaagaccttaaatgctgtcaaggacacggtgcaagaagtaaggcag
gtactcaagaaagagcacaaggttgacagtgattacagcaagatgaagataccagacaaa
gccaagagtgaaacccttcagaaggtcatcatggctggctactttcagacgctgagtctt
tacaatggccaccaccgtgcaggatacacagttctaccccagcagaagtcgggccatgtt
cacccctcatcggcactgaaggccctaggcatcaatccaacctgggtggtgtatgaggag
ttcaagcgtacttcacgcgacttcctcttcaatgtgactcaggtcgaaatctcgtggctg
gaagaagtggctccagtgttctaccatgagatcgatctgaaagccctcaaggatatggcc
atgattgagctgtctccaattccacttggcacggcactgatgagacaactgacagtaaaa
cgcaacgagaaactgcgcgccctcgaagaaaagatcacagctgagcaagactcatcatgc
attattgaagtcaaccgaagtacaaagcacttgcagatgtttgtcaacaagcagtgctca
tcgtttgccacatctcatgtcaagggatttctcgatgatgaatgcaagatgattgagcgg
cagcaggttgaagtgccagttggtgactctggagttgtcagacaagttgtggttgccgga
gcagaaacaaagttcatcctgatggcgaaagactatagaaccctggaaatcagcaacatg
ccggatgatgccaccgacgatgatgtggaaagaatcatccgttttgctggttgttccaga
caggaaatcctcgatgtgtaccgattcccaccgcagacgccgatggcaaaggctggcaaa
tggggccgtgtgaccttcatttcacctgaggctgcccaagatgccaaggagtggctggat
gtagctgttgctgcagaagagaccactctaactgctagaccaatgcaaggccgaggcttc
cagagacctgacatcagacgagtcaacaccagattggtcatcacttggttcacttggccc
tccaagggtcatgcgtttgtcaactgtgaaacaactgtggaggctatggacttaagactg
gccgtcactggtgtgcatctaaaaggacgtattttgctgtgcaacacaacgaagaaggat
tcaagagctgtgttcataaagaatgtacacccagatgcaacacaggatgaccttgagaga
gccatcaaaagaaaaacagccatcccttttaagaggtgctccattgctcgacaggaaccc
acagggcatataccaactccggaagaagtaactaatgatatatacaccatgtttgatggg
gcagtggaacagcaggacatgaatgtgaatgttctacctgtcaggtcagagaaaactcag
atgcaaaaagcgattgtcactttctctggggacaatgaaggccaggtggatgcacgcgtg
gcagagctccagcagaacccgcgacgaaactcggccgggcaagtctaccatgccaagatc
acagcatcatgcatgctcttctgccgacctgaagtttacagctgtcttgaagaggaaatc
cagcggcttgtggaaactgccaagacagagaaagaaggcctgagcatcagagttaacaag
agcaggaagacaagtgactgggtgatatccatcgcaagcgggaagattgaagatgtgcag
actgtcagacggtcacttctggtgtatgttcagggagaaacagtgccactgtctgacctc
taccattcagtgacatcctaccaaaagaaaacaaaattgttagagatgctgcaaaaagca
ctacagcacctgcttcaagatttggatgcctatgccacagttgatggccgcaggcaagcc
gttgtcttctttgggaaggaccaaatcagggagcgattgaaacgacgatttagagactac
accgagattgtctgcaaccagatgctgagagagattcccctgacagcgagcgtttcccct
cactgcacgaaaggaagggccattcgtgccttggtgaaagcctacggaccttggcttaag
gatcttcaagaaaaaagtggggctagcatcgtgatgaataccaaacttggagtgctcctg
attgagggaaaccagaaggtgtttgacaaagtccatgggatggtttacaactgtctcaaa
gaggcaggcttagaagaggccatcagtaatgaagctcagcagccctgtgaggatatcgag
tgcggtgtttgctacacctcgatcgacagtagtgacgaggtctaccgtctcagcgcctgt
tctcaggctcacggcttccatcaggagtgcctgatcgagatgtttaaagtccgactcaag
gattccagcaaagattacccaatagagtgtccgtcggagggatgcggccaggccatgctg
ttgtgcgacatccgcatcttgtgccctgaggaggacaagcgcctgcgtctctaccagctc
gccctagaggcccatgtggcgcagcgaagtgacggcaagctcaagttctgcccgacggct
gactgctgtatgatctataggcacacggaggacgctcagacatttgtgtgtccagagtgc
cgcgctcggctgtgttcatcttgtgcagctgagcctcaccctggacaaacctgtgagcag
ttcaagaaactaggcaagacctttgacgacatcaaagagtggatcaaggagacgggtgcc
gatgctaagatgtgcccggtgcccaactgtggctatgtcattgagaaaatctccggatgt
catcacatgacatgcctgggttgtggcaagcacatctgctggatgtgtctgcaatacttc
aacaccggccgtgcatgctatgggcaccttcaacaagttcatggaaattttgtgtaa
DBGET
integrated database retrieval system
