Acanthaster planci (crown-of-thorns starfish): 110973774
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Entry
110973774 CDS
T05078
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110973774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110973774
03009 Ribosome biogenesis [BR:
aplc03009
]
110973774
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110973774
Spliceosome [BR:
aplc03041
]
Complex A
U2 snRNP components
U2 related factors
110973774
Complex B
110973774
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
110973774
Ribosome biogenesis [BR:
aplc03009
]
Eukaryotic type
90S particles
Helicases
110973774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
ResIII
AAA_7
SRP54
AAA
Flavi_DEAD
T2SSE
PhoH
TsaE
RED_N
Motif
Other DBs
NCBI-GeneID:
110973774
NCBI-ProteinID:
XP_022080555
UniProt:
A0A8B7XKS2
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MSKRRLDINDSYSSKKRTDSEYRDRDRERDRDKDRDRDDRGRSSSSGSGAITSAPIAVNQ
FSAARQNNLGINPYNMTPYSMRYHQILAKRRTLPVWEYKAKFMEMLDRYKVMVLVGETGS
GKTTQIPQWCVEYVRSKFAMSSKKAVACTQPRRVAAMSVAQRVSDEMDLVLGQEVGYSIR
FEDCTSSKTILKYMTDGMLLREAMTDPLLERYGVILLDEAHERTLATDILMGLLKEVEKQ
RSDLKVVVMSATLDAGKFQDYFDHAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQI
HMGEEIEGDILLFLTGQEEIEEACKRIKREVDSLGNEVGDVKTIPLYSTLPPALQQRIFD
PAPPNKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPIS
KASAQQRAGRAGRTKPGKCFRLYTEKAYKLEMQDNTYPEILRSNLGTVVLQLKKLGIDDL
VHFDFMDPPAPETLMRALELLNYLGALDDNGDLTELGSMMAEFPLDPQLGKMVIASADNN
CSNEILSITAMLSVPQCFLRPNEAKKAADEAKMRFAHIDGDHLTMLNVYHAFKQNNEDVQ
WCYDNFIQSRSLKSADNVRQQLARIMDRFALKRTSTDFNSKDYYINIRKALVSGFFMQVA
HLERTGHYLTVKDNQIVQLHPSTCLDHKPEWVLYNEFVLTTKNYIRTVTDIKADWLVRIA
GQYYDMANFPQCEAKRVLERIIAKLQTQQ
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagacgattggacatcaacgattcgtattcatcgaagaaaaggacagactcg
gagtacagagacagggacagggaaagagatcgtgacaaggatcgggatcgcgatgatcgc
ggcaggtcttcgtcatccggctctggggcgatcacatccgcaccgatcgctgtcaaccag
ttctccgcagctagacaaaacaatctaggcatcaacccttacaacatgacaccttactcc
atgcgctaccaccagatcctggccaagcggcgcacgctgcccgtttgggaatacaaggcc
aagttcatggagatgctggataggtataaagtcatggtactcgttggagagactgggtcc
ggcaagaccacacagatcccccagtggtgtgtggagtatgtccgctccaagtttgccatg
tccagcaagaaggcagtggcctgcacgcagccccggagagtggccgccatgagcgtggca
cagcgagtgtcagacgagatggaccttgtgctgggccaggaggtcggctacagtatacga
tttgaagactgcaccagctccaagacgatactcaaatacatgaccgatggtatgttgcta
cgcgaggcaatgacagatcctctcctggagcgctatggggtcatactgcttgacgaggcc
cacgagcgcaccctggccacagacatcctgatgggtctccttaaggaggtggagaagcag
cgctcagacctcaaggtggtggtcatgagtgccacgctagacgctggcaagtttcaggac
tatttcgaccatgcccctctaatgacggtccccggccgcacccacccggtggagatcttc
tacaccccagagcccgagagggattacctcgaggcagccatccgcaccgtggtccagatc
cacatgggagaagagatagagggggacatcttgctcttcttgactggccaggaggaaatt
gaggaagcctgtaaacgaataaagcgagaggttgacagcctaggcaacgaggtgggcgat
gtcaagaccattcctctgtattccaccctccccccagcgctgcagcagcgaatcttcgac
ccagccccacccaacaaggccaacggcgccatcgggcgcaaggtggtggtgtcgaccaac
atcgccgagacctccctcacaatagacggcgtggtgtttgtgatcgatcctggctttgcc
aaacagaaggtgtacaatcctcgaatcagggtagagtccctgctggtctccccaatcagc
aaggccagcgcccagcagcgggcaggccgcgccggccgcaccaagccaggcaagtgcttc
cgcctgtacacggagaaggcctacaagctggagatgcaggacaacacatacccagagatc
ttgcgctccaacctgggcacggtggtgctgcagctgaagaagctgggcattgacgacctg
gtccactttgatttcatggacccgccagcacctgaaaccctgatgagagccctggagctt
ctgaactacctcggagccctggacgacaatggggacctgacggagctgggttccatgatg
gccgagttccccctggacccccagctgggcaagatggtcatcgccagtgccgacaacaac
tgctccaacgagatcctatccatcacggccatgctgtcagttccacagtgttttctgcga
cccaacgaggccaagaaggccgctgacgaggccaagatgagatttgcgcacatcgacggc
gatcacctgaccatgctcaatgtctaccatgccttcaaacagaacaatgaggacgtgcag
tggtgctacgacaacttcatccagagcaggtccctgaagtcggccgacaacgtacggcag
cagcttgcccgcatcatggatcggtttgccctcaagcgcaccagcaccgacttcaacagc
aaggactattatattaacatccgcaaggctctcgtttcggggttcttcatgcaggtggcc
cacttggaacggaccggtcactacctgacggtcaaagacaatcagatcgtccagctccac
ccctccacatgtctggaccacaagccagagtgggtgctgtacaacgaatttgtactgacc
accaagaactacatccgcactgtaaccgacatcaaggctgactggttggtccgcatcgcc
ggccagtattacgacatggccaacttcccgcaatgtgaagccaagcgcgtgctggaacgc
atcattgccaagcttcaaacgcaacagtaa
DBGET
integrated database retrieval system
