Acanthaster planci (crown-of-thorns starfish): 110974930
Help
Entry
110974930 CDS
T05078
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110974930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aplc03021
]
110974930
03036 Chromosome and associated proteins [BR:
aplc03036
]
110974930
Transcription machinery [BR:
aplc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110974930
Chromosome and associated proteins [BR:
aplc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110974930
PBAF complex
110974930
GBAF(ncBAF) complex
110974930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
110974930
NCBI-ProteinID:
XP_022082595
UniProt:
A0A8B7XRH0
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MVKMCRPTKMAVRKKDGGADFKFFESAETISQLDNVKSWLQRNCKKWIQAEPPTNKGLAS
LLAQLVQFQEDAFGRHVSNPALTRLPMRCFMDFKSGGGLCNILMAVYKFKSDQGWRRFDF
QSPSRMDRNVEMFMSVEKNLLQTRCLSLPVIYIQDEVEPKLMAKLKDIIKRHQGSVTEDI
EMATHIVYGPPPSLNDGEEYIRPILRREKSMLVHWCYYPDSYDTWVPASEVPGDPEPGVT
YDGPWEVNAKWVLDLEEFNEWMNVEDYEIYEDQGETKEVVNVGSGHMRRKVYPTKPMVEE
HAHSPETDRREKRGGAGKKRKRSPSPTSDKRKKKPGRSPAPIMKKRIPRDEEPEDLTKDM
ENPATVPAVEEVQLPKIVSSRSGRDTELQPIKGGSLQELDDTQDESQDKLNGESAALVTG
AELEEKESKAPEAQEEQVTEQTHHIIVPSYSAWFDYNSIHAIERRALPEFFNAKNKSKTA
EVFMAYRNFMIDTYRLNPTEYLTFTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAENR
AAPMGPPPTSHFHVLADTPSGLQPMQPAKSQQSASQQVANLTEKGGNKEKASGDLQNFGL
RTDLYAAKKSQPSKGKSTSASVTKEWTDQETLLLLEALEMYRDDWNKVSEHVGSRTQDEC
ILHFLRLPIEDTFLEDGPNALGPLSYQPIPFSQSGNPLMSTVAFLASAVDPRVASAAAKA
AIEEFSKMKEEVPTALVQTHIKRIQDSTRAGMSTDNHLLDASGIAGTIPEPERMEEGAEV
GKTEAGGTDGSGEGAAATSKENADKEIKVKEESQATEEKEKDGGEAMETQTPSPQKIPEG
EGPEKKAEEAAEKMETGEVKVEGATMEAKEASKEDSQEASEQKPEEDSASKEETPDGETT
EKKEGEEAKEEDKAPKEKPEAVKKHEEELSEGNVASAAAAALAAAAVKAKHLAAVEERKI
KSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQQFHQEQLRAAEM
RARQHAQAMAAMQQAATGGPAPSNNAAAPSIPQLTGSPQLPSSTPPPSSVTATQPTVPHP
EQAAVPAPMVTPVGADGVSEGTSVQDQQAGVGGSQQPVKADEQPQAESVPAEEPMDTGDV
PSQPDAPVPAPSTAAQNPAIVAAVTGALPPTSVGSDSTLTQSPLQDTNSQDGAGSLAESR
PESMGSEALSNQSASNQSPPSTASPAS
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaatgtgtaggccaactaaaatggctgtcaggaaaaaagacggcggtgcagat
tttaagtttttcgagtctgccgaaacgatttcgcaactggacaacgtgaaatcatggctt
caaagaaactgcaagaagtggattcaggcagaacctcccaccaacaagggcctggcctcg
ctcttggcacagctggtgcagttccaggaagatgcatttggcagacacgtgagcaaccct
gccctcaccagactaccaatgcgttgctttatggacttcaagtcaggtggtggactatgc
aacatcctgatggcggtctataagtttaagagtgaccaaggatggcggcggttcgatttc
cagtcgccctcccgcatggaccgcaatgtggagatgttcatgagcgttgaaaagaacctg
ctgcagacgcgctgcctgtccctgcccgtgatctacattcaggatgaggtcgagcccaag
ctgatggctaagttgaaagacatcattaagaggcaccagggttcggtcactgaggacatt
gagatggcaacacatatagtgtatggtcccccgccttccctgaatgatggtgaggagtac
attcgtcccatcctgcgacgggagaagtccatgctggtccactggtgctactacccagac
agctatgacacctgggtgcctgcgtcagaggtgcctggtgaccctgagcctggggtcacc
tacgatggtccctgggaggttaacgccaaatgggtgctggatctcgaagagttcaacgag
tggatgaatgttgaagactacgaaatatatgaagatcagggagaaactaaggaagttgtc
aacgtgggatcaggacacatgagacgaaaggtttacccaacgaagcccatggtggaagag
cacgcccatagtccggaaacagacaggagagagaagagaggcggtgccgggaagaagagg
aagaggtcaccctcgccgacctctgacaagaggaaaaagaaaccgggtcgcagtccggcg
cccatcatgaagaaaagaattcctcgggacgaggagcccgaggacctgaccaaggacatg
gaaaatccagccactgtccctgccgtggaagaggtccaactacccaaaatagtttcaagt
cgtagcggacgggacacagagttgcagccgatcaagggaggctcgttgcaagagctggac
gacacccaggacgagtcccaggacaagctgaacggggaatcggcagccctagtgacgggg
gcggagcttgaggagaaggagagcaaagcgcctgaggcacaagaggagcaggtgacggag
cagacccatcacatcatcgtgcccagctactcggcctggtttgactataacagcatccac
gccattgagaggcgcgccctgcccgaattcttcaacgccaagaacaagtcaaagactgcc
gaggtgttcatggcatatcgcaacttcatgattgacacgtatcgtctgaacccaacagag
tacctgactttcacggcttgtcgtaggaaccttgctggtgatgtgtgtgctattatgaga
gtacacgctttcctggagcagtggggtctcatcaactaccaggtggatgctgagaatcgt
gccgcccccatgggtcccccgcccacctcccacttccacgttctggctgacacgccctcc
ggattgcagcccatgcagccagcgaaatcgcagcagtcggcttcccagcaagtggccaac
ctgactgagaagggagggaacaaagagaaagccagcggtgacctgcagaactttggcctg
cggacggacctgtacgcagccaagaaatcacagccttcaaagggcaagtcaacctcggcc
agcgtgaccaaggagtggacggatcaggagaccttgctcctcctagaagccctagagatg
taccgtgacgactggaacaaggtgtcggagcacgtgggctcccgcacccaggacgaatgc
atcctgcacttcctccggctgcccatcgaggacaccttcctggaagacggacccaacgcg
ttaggacccctcagctaccagcccatccctttcagccagtcaggcaaccctctcatgagc
actgtggctttcctagcgtcagccgtggatcccagagtggctagcgctgcagccaaggca
gccatcgaggagttcagcaagatgaaggaggaagtgcccacggctctggtccagacccac
atcaagcgcatccaggactccacccgggccggcatgagcaccgacaaccacctgctagac
gccagcggaatcgccggcaccatccccgaacccgagaggatggaggaaggggcagaagtg
ggcaagacggaggcaggaggcaccgacggaagcggggaaggagcagctgctaccagcaag
gagaacgctgacaaggaaatcaaagtgaaagaggaatcgcaagccaccgaagaaaaggaa
aaagatggaggcgaagccatggaaacacagaccccctctcctcagaagatccccgagggg
gaggggccagagaagaaggcagaggaggccgctgagaagatggagacaggagaagtaaag
gttgaaggtgccacgatggaagcaaaggaggcaagcaaggaagattcccaagaggccagc
gagcagaagccagaggaggactccgcttccaaagaggagacacccgatggtgagacgaca
gagaagaaggaaggagaagaggccaaggaggaggacaaggcacccaaggagaagccagaa
gccgtcaagaagcacgaagaggagctgtcggaagggaatgtagcctcggcagctgctgcc
gcactcgctgccgctgcggtcaaagcaaagcacttggcggcggtcgaggaacgtaagatc
aagagcctggtcgccttgttggtggagacgcaaatgaagaaattggagatcaaactgcgg
cactttgaagaactggaaacgatcatggacagggagagagaagcgctggagtaccagcga
cagcagttgctcgccgataggcagcaattccaccaggagcaactgcgggcggctgagatg
cgagcccgtcaacacgcccaggccatggctgccatgcagcaggcagcgacgggcggaccg
gcacccagcaataatgccgcagcaccaagtattcctcaactcaccggttcccctcagcta
ccctccagcactcctcccccgtcatcggtgactgcaactcagcccaccgtcccccacccc
gagcaggcggccgtgccagcgcccatggtcacccccgtgggcgccgatggtgtttcagag
gggaccagcgtccaggaccaacaggccggagttggggggagccagcagccggtcaaagcg
gacgagcagccgcaggcagaaagtgtacccgctgaggaacccatggatactggcgatgtc
ccaagccaaccagatgcccctgtacccgctccatccacggccgctcagaacccagccatc
gtagccgccgtgacgggcgccttgcctcccacctccgtagggagcgacagcaccctcacc
cagagccctcttcaagacaccaacagccaagatggcgcaggcagcctggcagagagtcgg
cctgagagcatgggcagtgaagccttgagtaaccagtcagccagtaaccagtcccctccc
agtacggcctcccctgcctcgtaa
DBGET
integrated database retrieval system
