Acanthaster planci (crown-of-thorns starfish): 110975087
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Entry
110975087 CDS
T05078
Name
(RefSeq) general transcription factor IIH subunit 1-like isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03022
Basal transcription factors
aplc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110975087
09124 Replication and repair
03420 Nucleotide excision repair
110975087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aplc03021
]
110975087
03400 DNA repair and recombination proteins [BR:
aplc03400
]
110975087
Transcription machinery [BR:
aplc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110975087
DNA repair and recombination proteins [BR:
aplc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110975087
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Maff2
Motif
Other DBs
NCBI-GeneID:
110975087
NCBI-ProteinID:
XP_022082915
UniProt:
A0A8B7XQ17
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MATSSEEVLLIINQVRLHKSDGSLYFMAERLAWQDNNKDHFSVSHHYRDIKQQKISQDTS
IKVQLQVVLHDGTNSKFHFANREGTEAQRRDRGAAKELLQQLLPHFRLMVNKELEEKNRI
LQEDPELFQLYKDLVISKVMTADEFWSNRKATVVPKEPSVSNAKAKQDVGVSAAFLSDIK
PQTDGCNGVKYNLTADIIEAIFRIYPTVRKKHAENVPQNMTEKEFWTRFFQSQYFHRDRI
HLNNKDIFTECAKDDEKEMRNETNTQSDPLLNVEGMSDNTLGEGYGSNKDGSKSQSTNQL
VNASIIKRFNHHNARVLSISQQEGRPTPNGLPLGIPSSSSATTSNNHREVTTNQVEPPAK
RTRLKEAIEIEDLAPSTSAAPVTLKLERTDRYYHGPTPVNPSQYNTSSEVIGAVERLEQQ
LSGQHTSLTKVLRSGVAGSVTNELTPGGALMGRNTTQPLHTLYNKEVQDELKRLYAALAE
LLRHFWSCFPVASKTVEEKLIRMKGTLEQFQARKLQPFRESLARQHIGANMTIHMEELLT
TAYAKFNSWQAKNASQRS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtcctcggaggaggtcctgttgatcatcaaccaagtccgattgcacaagagc
gatgggtccttgtacttcatggcggaacgcctggcctggcaagataataacaaggaccac
ttctccgttagccatcattacagggacatcaaacagcaaaagatctcccaggacaccagc
atcaaggtgcagctgcaggtggtgctacacgacggcaccaacagcaagttccactttgcc
aaccgggaggggacggaggcccagcggcgggaccggggagcagccaaggagctccttcaa
cagcttctgccccacttccgattgatggtcaacaaggaactcgaggagaagaatcgtatc
ctacaggaggacccggaactcttccagctgtacaaagacctggtcatcagcaaggttatg
acagccgacgagttctggtcaaacaggaaggcaactgtcgtacccaaagaacccagcgtc
agcaatgccaaggccaagcaagatgtgggcgtctcagcagctttcctgtcggacatcaag
cctcagacggacggctgcaacggcgtcaagtacaacctgacggcagacatcattgaagcc
atcttcagaatctacccaaccgtgaggaagaagcatgctgagaacgttccccagaacatg
acggagaaggagttctggactcgattctttcagtctcaatatttccaccgcgaccggatc
cacctcaacaacaaggacatctttacagagtgtgccaaggacgacgaaaaagaaatgaga
aatgaaaccaacactcagagtgatcccttgttgaatgtggaaggcatgtcagacaacacc
ctgggggaggggtatggctccaacaaggacggttcaaagtcacagtcgacaaaccagctc
gtcaacgcatccatcatcaaaaggttcaaccaccacaatgctagggtcctgagcatctcg
caacaagagggcagacctacccctaacggtctaccactcggcatcccctcatcctcatca
gccacaacctccaacaaccaccgagaagtgactaccaatcaggtggagcctccggcgaag
cggacacgtctgaaagaagcgattgagattgaggatcttgctccttcaactagtgccgca
cccgtgacgttaaaacttgagagaactgacaggtactatcatggacccactccagtgaat
ccatcccagtacaacacatccagtgaggtcatcggtgcagtggagaggttggaacagcag
ctcagcggacagcacaccagcctgaccaaggtattgcggagcggtgttgctggatcggtc
accaacgagctgacaccagggggcgcactgatgggacgaaacaccacgcagccccttcac
acgctctataacaaagaagtccaagacgagctgaagcgcctgtatgctgccctcgccgag
ctcctgcgccacttctggtcctgctttcctgtcgccagcaagacagtcgaggagaagctg
atccgcatgaaaggaacgctggaacagttccaggccagaaagctgcagccattccgtgaa
tcgttggccaggcaacacataggtgctaatatgacaattcacatggaggaattgctgact
acagcctatgccaagttcaactcatggcaagccaagaatgccagtcaaaggtcatga
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