Acanthaster planci (crown-of-thorns starfish): 110975208
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Entry
110975208 CDS
T05078
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2-like
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110975208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110975208
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110975208
U7-dependent histone pre-mRNA processing factors
110975208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
110975208
NCBI-ProteinID:
XP_022083164
UniProt:
A0A8B7XQQ2
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MTSIIKLTPFSGVGDESPPCYMLQVDEFRFLLDCGWDESFNLDYIENLKKHVHQIDAMLL
TYPDHLHLGALPYIVGKCGLTCPIYATIPVYKMGQMFMYDLYQSRHNSEEFDLFTLDDVD
SAFDKIIQLKYSQSTNLKGKGHGLTITPLPAGHMIGGTLWRIVKDGEEEIIYAIDYNHKK
ERHLNGCVLESLSRPSLLITDAFNATYVQARRRLRDEQLMTIILNTMRRDGNVLIAVDTA
GRVVELSLLLDQLWRNTESGLSPYSLAIINNVSYNVVEFAKSQVEWMSDKVMRSFEDKRN
NPFQFKHLKLCHSLKELAKVPEPKVVLASVPDLQCGYSRSLFVDWCDNPKNSIVLTCRSS
HGTLARSFIDNIQQKEIKLKLSKRVKLDPEELEQYRQKEKERKAAEKMRKGTDMDSSDES
EEEMEIGEVGGHKGSKKFIQHDLMLKAESGKKGTSFFKHAKKSFPMFPFHEERIRWDEYG
ELIKPEDYMVTEMAQAEEEKTKAEEDGFDGEDVGEAGADIPTKCVSREVTLEVKCSVNFI
DFEGRSDGESIKKLISQVKPRQLIIVHGSEEATQHLAEYCRLQLAGTKVFTPSINETMDA
TMESHIYQVRLKDSLVSSLEFSKAKDAELAWIDGQLDLPTPHLGVVKEQTGTTEEEGSEV
KIKAPGLGIGKDTSADTDEIIPMLGAIPLQEVPGHYQVFVNAPKFQDLKQVMSRNGIQAE
FSGGVLVCNSLVAIKRNDSGRITLEGCLSPDYFKVRELLYEQYAII
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgacatctatcataaaactgaccccattttcaggagtgggggatgagtctccaccctgt
tacatgctccaggtggacgagttccgtttcctgctggattgtggctgggatgaaagtttc
aacttggactacattgagaacttgaaaaagcatgttcatcagattgatgcaatgttgctg
acttatcctgaccacctccatctcggtgccttgccatacattgtcggcaaatgcggtttg
acatgccccatctatgccaccattccagtctacaagatgggacagatgttcatgtacgac
ttgtaccagtcaaggcataattcagaagagtttgatttgttcacactggatgatgtggac
tcagcatttgacaagatcattcagttgaagtattcccaaagcacaaaccttaaaggtaaa
ggtcacggtctgactataactccacttcctgctggtcacatgatcggaggcacgctgtgg
aggatagtcaaagacggcgaggaggagatcatctacgccatcgactacaaccacaagaag
gaacgccatctgaatggttgcgtcttagagtcgctgagtcgtccatcgctcctcatcacc
gatgccttcaatgccacctatgttcaggccaggagaaggctgagggatgaacagctgatg
accattattttgaacacaatgagaagagatggcaacgtactcattgcagtggacacagct
ggcagagttgttgaactttcactcctgttggatcagttgtggcggaacacagaatctggg
ttgagcccatactcgctggcaataatcaacaacgtcagctataatgtagtagaattcgca
aagtcacaggtggagtggatgagcgacaaggtgatgcgatcctttgaggacaaacgcaac
aatcccttccagttcaagcatctgaagctgtgtcactcactgaaagaactggccaaggtt
ccagaaccaaaggttgtactggccagtgtgccagatctgcagtgcggctactcccggagt
ctcttcgtggactggtgtgataaccctaagaatagcattgttttgacctgccgcagcagt
cacggcacactggcacgatcattcatcgacaacatccaacagaaagaaattaaactcaag
ctgagtaagcgagtgaagctggacccagaggagttagagcagtacagacagaaagaaaag
gaaagaaaagcagcggagaagatgagaaagggtacagacatggactccagtgacgagagc
gaagaggagatggagattggtgaagtaggaggccacaaaggcagtaaaaaattcatccag
catgatttgatgctcaaagcagagagtggcaagaaagggactagcttcttcaagcacgcc
aagaagtccttccccatgttcccgttccacgaggagagaataagatgggacgagtacggt
gaactgattaaacccgaagactacatggtcacggaaatggcccaggcagaggaggagaag
accaaagctgaagaggatggctttgatggtgaagacgtgggcgaagctggtgccgacatt
ccaaccaagtgtgtctctcgcgaggtcactctagaggtcaaatgctcagtcaacttcatc
gattttgaggggcgctctgacggcgagtctatcaagaagctgatctcccaggtcaaacca
agacagctgattatagtacatgggtcagaggaggccacgcaacacttggctgagtactgc
cggctacagttggcgggaactaaagtatttacacccagtatcaacgagacaatggatgcc
actatggaaagccacatctatcaagtgagattgaaggactctttggtaagctccctggag
ttttccaaagccaaagatgcggagctggcatggattgacggccagctggacctcccaaca
ccacatcttggagtggtcaaggaacagaccggaaccaccgaggaagaagggtcagaggtc
aagattaaagcaccagggttgggcatcggtaaggacacctctgcggatactgatgagatt
ataccaatgttaggagccattccgcttcaggaggtcccaggccattaccaagtctttgtg
aatgcccccaagttccaagatctcaagcaggtcatgtcgcgcaacggcatccaagctgag
ttcagcgggggtgtcctggtctgcaattcgttggtagcaatcaaacggaacgattctggc
aggatcactctggagggctgcctaagtccggattacttcaaagtgcgagagcttctctac
gagcaatatgccatcatctaa
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