Acanthaster planci (crown-of-thorns starfish): 110975643
Help
Entry
110975643 CDS
T05078
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110975643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110975643
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110975643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_19
TPR_1
TPR_10
TPR_14
ARM_TT21
Iml2-TPR_39
SPO22
TPR_17
Motif
Other DBs
NCBI-GeneID:
110975643
NCBI-ProteinID:
XP_022083967
UniProt:
A0A8B7XUR2
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MADKDSGKEKECPAESPAPSPIPVITEEEKEMASVASTDFEAGQYAPCLEKLHALSKLRG
SDVKVGHNLMVAKFYQSGCTRNDDLRKALGQVCTQAQVNLSGVDSLEDTDHAILFFNHAI
ILYHMRQHHEAIQILEKLFQIIEPLEENLAHKILLLLIETYLCTYQPEKALGILAYLEKL
LFSTESSGNKGGSESSNKDNKDSNTEESNIDPEKYRPTLHLLKTRCYLQMKHVKVCKREI
KTVMNSAGPCAVSLFLKSNFEYIRQNYRKAIKLLNSATPTADSLKTGQVIPVMYFNNLAI
IHFYMGKYHLAAYYGRRALQENANAIAELPKRKGQSLNNRHIKTLGMNRRYELLYNVGIQ
LLHEGRPLAAFECLTEAIQVYPTNPRLWLRLAECCIAANALPQNSEAEGKSSLDSTRRGI
VRNVIGSGPHRKVILSPGSSEYKYSDGQSAAFPAPTLEFASLCLSNALSLLPEETTPSTL
SRITSRGSVGSDSSEVADTISSNKQTSISNPTAPLGQSVKPTDIVCLRCSILASSSYVAL
SLGDNVHALEYARLLLEQTRLPGSLRFLGHLYAAEALINMDQIVEAIQHLAPDSVCDVSV
VLPVLPEQGDKQGDKSEAGPGDIQESTEGHIAVSKHYPASVQVARATMLLNLACAHSLRS
EWDKAKKCLKQMCSILPPSEIPEQALFLGIYIELQTGSHQMALHMVKKQQLIPYLKPSQS
RPLPIGTMAAFNNASPSPQGVFSSGTASKAGRSKDPWQK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggacagcggcaaggagaaggagtgtccggccgaatctcctgccccctcc
ccaattccagtcatcaccgaggaagagaaggagatggcatctgtcgctagcactgacttt
gaggctggccagtatgccccctgcctggaaaagctgcatgcgttgtccaaactgaggggc
agtgatgtcaaagtcggccacaacctgatggtggccaagttctaccagtcgggctgcact
cggaatgacgacctgcgcaaggcactgggccaggtctgcactcaggcccaggtgaacctg
agtggagttgactcattggaagacacagaccatgctattcttttcttcaatcacgccatc
atcctgtaccacatgagacagcaccatgaagctatccaaattctggaaaagctcttccaa
atcattgagcccctcgaagaaaacctcgctcacaagatcctcttgttgctgattgagacc
tacctgtgcacttatcaacctgagaaagccttaggcatcttagcttacttggagaagctt
ctcttctctacggaatcctccggcaacaaaggaggatcggaatcaagtaataaagacaac
aaggactcaaacacagaggaatcgaacattgaccctgagaaataccggccaactttgcat
ctgttaaaaactagatgctacctgcagatgaaacatgtgaaagtctgcaaacgtgagatt
aagacagtcatgaactcagctggaccgtgtgcggtctccttgttcctcaagagcaatttc
gaatacatccgtcagaattaccgcaaggctatcaagctgctgaacagtgccacgcccaca
gccgactccctcaagacgggccaggtcattccagtcatgtacttcaacaacctggccatt
attcacttttacatgggaaagtatcacttagccgcctactacggacgtcgtgccttgcag
gagaatgctaatgccattgctgagttgccaaagagaaaaggtcagtctctgaacaatcgt
cacatcaagacgctcgggatgaaccgtcgctacgagctcctgtacaatgtgggcatacag
cttctgcatgaagggcgccctctagcagcctttgagtgcctgacagaagccatacaggtg
tacccgaccaacccgaggttgtggctgagactggccgagtgttgcatcgcagccaacgca
ctacctcagaactcagaggctgaagggaagagctcgttggattccactagacgaggcatc
gtgcgtaacgtgataggttctggccctcatcgcaaagtgattttatcccctggatcctct
gagtataaatacagtgatggccaatcagcagcatttccagcaccaacgttagaatttgcc
tctctgtgtctctccaatgccctgtctcttctccctgaagagactacaccctccacatta
agtaggataacatcgcgaggaagcgtgggtagcgactcctcagaagtcgcagacacaatc
agcagcaataagcaaaccagcatcagcaatcccaccgcacccctgggccagtccgtcaaa
ccgactgacatcgtttgcctgcgttgctccatcttggccagcagcagctatgtggccctg
tcattgggtgacaacgtccatgcgttggagtacgccaggttgctgctggagcaaaccagg
ctgccgggatcgctcaggttcctgggccacctgtatgctgctgaagccttaattaacatg
gaccagatagttgaggcaatccaacacctggccccagactctgtatgtgatgtgtccgtt
gtgcttccagttctacctgaacaaggcgataaacaaggggataaatcagaggccggtccc
ggggacatccaggagagcacggagggtcacattgccgtgtccaagcactacccagcttcc
gtgcaggttgccagggcaaccatgttgctcaacctagcgtgtgcgcattcactgcggagt
gaatgggacaaggccaagaaatgcctcaagcagatgtgcagcattttacctcccagtgag
atcccagagcaagccctcttccttggcatatacattgagctgcagacaggcagtcaccag
atggcactgcacatggttaagaagcaacagctcatcccatacctcaagccgtctcagtcc
cgcccgctgcccatcggcaccatggcagccttcaacaatgcctccccatcaccgcagggg
gtctttagttccggaaccgccagcaaagctgggcggagtaaggatccatggcagaaatag
DBGET
integrated database retrieval system
