KEGG   Acanthaster planci (crown-of-thorns starfish): 110976125
Entry
110976125         CDS       T05078                                 
Name
(RefSeq) gem-associated protein 5-like isoform X1
  KO
K13133  gem associated protein 5
Organism
aplc  Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:aplc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aplc03019]
    110976125
   03041 Spliceosome [BR:aplc03041]
    110976125
Messenger RNA biogenesis [BR:aplc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     110976125
   mRNA cycle factors
    P-body specific factors
     110976125
Spliceosome [BR:aplc03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    110976125
SSDB
Motif
Pfam: TPR_GEMI5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40 WD40_Prp19 GEMI5_RBS WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_1st WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st WD40_Gbeta WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_IP5PC_F Beta-prop_SCAP Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 110976125
NCBI-ProteinID: XP_022084838
UniProt: A0A8B7XVE8
LinkDB
Position
Unknown
AA seq 1853 aa
MIEDLLPPSPNWYCSQACDCSYDGLFAYATRNSIFLLDVRNNSPSYAGCLTGHSERVTAV
KFGRETHDRHLCATAGDDGCVKVWDTRNKAVLNDHRYHNENKVTAVQWCASTVPNSQVIS
GDEKGTLVWWNHASGGGKEFTPEKRHIYCLASCPHNGEFVAIGYKTGLVLIVDISGKGQI
LQRLRGHDEEVHSVCWSPGLGEDIPLRKPKQDGDKAECQVVPTGSPPDDFPMATASALPS
TLRERGCLLVSGSRDRTLKVWNTTQGKAVLTLALPPRGGVQRTRDRSDDGGKAKVWVGLC
WPSDKPREFLSSSYGGDLILWDLCKPGKQKWEYIGMDNHNTASHNRIIFNISSIPHCPDM
FITTSMDRQIICWNRKTLKMVWLIPTLGGFVYTLSACSVDPGCLALGVGDNMIRVWNSSS
PGRGKTISILWQGIKSKVTALSWHPERDNCLAYGTDDGRVGIYSTFTQGKGPALSSTFHK
KTVYSLSWGPHCLAKEGVSGYCLYSCGGDGMIYQHDPTKLGEDATNFNSLIRSANQISYM
LPLRTDVSWRDDGRAVAIGNEDGSIEIVACPSLLLLCTIRVHHKLINCLEWYPTHSQSEA
SVQVPSQSAGILEDGSSGTGQSGKRWWLASGSNEPQVQVHDLTSVLGGIEPVQLKTPVTG
SFRTLNGHTLRITALSWSPHGDGRLVSASYDGTAQVWDTLKGEPIANFRGHLGRLFSVSW
SILDPDVIFSGGEDFCLLKWRVSQVQHTRPPAHKRNTAAFMQRSGKSKSASSGKSKKKAK
SAKDTCSVGSSSPGSCTPEPTSTKDAPPIPEGLPPDGSLLDPPVDMSDLQRLLEEKRLEM
QKLTLTEASEAEARRQQTENVMSSEPTFVEEKEVTELKTGEVDEAGEKGRGGDTEVGVES
VAQTTEGSDVTYKKDGRRKKKHKSLFPLSRSQDNRGKLYHLEDCVTLAHHKYGTDDAGRP
FTTAHPAVGEQVHSTDPSEAVSSARLHPGVGDAVHLGLFADRRAAFAMFREEGIYHSEAG
NRDQRQCLDMWKGNLAGTLAHARECNQLNSFLVAMAPLGGYDVWLETVEAYAQQLERCED
YSQAATYYLACHKIHKAIAVLLDNKLFREAVALASVRLSPFDPAFTEVYRAWASHLDAEG
SYGQAAKCYLTINQPTDAVMLLARKSDILSLSAALRVACITHLGDLTIGLMVRYLHECLM
AGDWLEAQTVLANHKSVLAGSLIAALHEVIVTTLTHQKLILRDLFEEPKTNPWIQGMFRD
ETNNMDDLSGWTVPLFEGATPLPAAVQHWFLQCHMDQTDEDLVQRLYDEVVSIRQQNTQH
LPTKQLLIELAFELTLGQLSLLMAGESETVPHWLQAVVMCHDAGDVDMARGVLSLVLPEG
IYSIMKLHKSAAVTSLYAYYLFTVLYSLWWEVGCETTPSKNPELLVSKAGVPRDTQRGIE
TNSDTANIIARRTEATESHLEGTSGTVSRVMATERASELVENPGQPIADFTGSVSETQAQ
ITFDQHDLFTTLTDCTNQSVESYAASASIVTAPSCSNMSKDVNQGHDATRSQFEERLVPK
LETISKALLSEPHAKVRSLKGSIRCIQKAVEKLVTQHATKGQEPVPVDHDQEGSIDKDRA
PDRPDHEAVDCGFYASRENESAVPTVKDGGAFELKERATSPDVCALSQIVSESTGRLVNS
CLPESLNPLEVSTNIVSSRQDDGTPVEVDIATEKQFDSNSNAAAKETHSEVDKYLEVCLP
SSWEAVMADVKYIDPALTYTDLLQEQSRLMQELEQLGKRCPFPDSVESAMVLVHVCRAAR
LKRNLSKADQQELKTLEKEAITWGLEHSWLTFQRKLFIKHLANLVLEQPNSAL
NT seq 5562 nt   +upstreamnt  +downstreamnt
atgatagaggaccttctccctccgtcaccaaattggtactgcagtcaggcttgtgactgt
agttatgatggattgtttgcatatgccacaagaaattcgatctttctgctcgatgttcga
aacaactcgccgagttacgcgggatgcttaacggggcattcggagcgggtgacagcggta
aaatttggcagagagacccacgacagacacctctgtgctacagcgggcgacgatggttgt
gtaaaagtatgggatacacgaaataaggctgttttaaatgaccatcggtatcataacgag
aataaagtgacagcagtccagtggtgtgcctcaacagtgccaaacagtcaagtcatttca
ggagatgagaagggcaccctcgtctggtggaatcatgccagtggcgggggtaaggagttc
acacctgaaaaacggcacatctactgtcttgcgagctgcccacacaatggggaatttgtt
gccattggctacaaaacaggtctggtgctgatcgtggacatcagcggcaaagggcaaata
cttcagagattgagaggtcatgatgaggaggtccactctgtctgctggtccccaggactt
ggggaggacatccctcttcgcaaacccaaacaagacggagacaaagccgaatgccaagtt
gtccctactggctcgcctcctgatgattttcccatggcgactgcatcagcccttccatcg
acactgagagagcgaggatgcctgcttgtctcggggagccgggatcgcaccctcaaagtc
tggaacaccacccaggggaaggcagtgctgaccctggccctgcccccacggggaggcgtg
caacgcacaagggatcggagcgatgacggaggaaaggcaaaggtgtgggtgggtctgtgc
tggccatctgacaagcccagggaatttctttcaagttcttacggaggagatcttattttg
tgggacttgtgcaaacctggaaagcagaagtgggaatacattggcatggacaatcataat
actgcatctcacaataggatcatattcaacatatcaagcattccacactgtcctgatatg
ttcatcaccacatcgatggacagacagatcatatgctggaacagaaagacactcaagatg
gtttggttaatccccaccctagggggattcgtctacactctgtcagcttgttctgtagat
ccaggttgcctggcactgggagtgggggacaacatgatcagggtgtggaactcttcgtcc
ccagggagggggaagactatcagcatcctgtggcagggaatcaaatcaaaggtcacagcg
ctgtcttggcacccagagagagataattgtctggcatacggaactgatgatggccgcgta
ggcatctacagtaccttcacgcagggtaaagggcctgctctgtcaagcacgttccacaag
aagacagtttactccctgagctggggtccacactgtctagccaaagagggagtatccggc
tattgcctgtacagctgtggtggtgatggcatgatatatcaacatgacccaaccaaactc
ggggaggatgccacaaacttcaacagcctcattcgctcagccaatcaaatttcgtacatg
cttcccttacgtactgacgtgtcttggagagatgatggaagagcagttgccataggaaat
gaggatgggtctattgagatcgtggcctgcccaagtctgttgctgctgtgcaccatccga
gtccaccacaagctcatcaactgcctggagtggtacccaacccacagccagtcagaagcc
agcgtacaggttcctagccaatccgcaggcatattggaagatggttcgagtggcactggc
caatcagggaagaggtggtggctggcttctggctccaatgagccacaagtccaggttcat
gatctgacatctgtgctaggaggaattgaaccagtccaactgaaaacgcctgtgactgga
tcattccgcactctgaatggccataccctaagaatcacagcattatcatggagtccacat
ggtgatgggcgccttgtgtctgcttcttacgatggtacagctcaggtgtgggacacactg
aaaggagagcctattgccaatttccgcggccatcttggccgtcttttctcagtctcctgg
agtatcctagatcccgatgtcatcttctcgggtggtgaggacttttgtctgttgaaatgg
agagtgtcccaagtacagcataccagaccacctgcccacaaaagaaacacagcagcattt
atgcaacgcagtgggaagagtaaatcagcttcatctggtaagagcaaaaagaaagcaaaa
tcagccaaagacacgtgcagcgtgggcagctcatctccgggttcctgcaccccagaacca
acatcaactaaggatgctccacccatccccgagggacttccccctgatggatcccttctg
gacccaccagttgatatgtcagatctgcagcgacttctcgaggaaaagagacttgagatg
cagaaactgactttgaccgaggcctcagaagcagaggcaaggcgtcagcagactgagaat
gtgatgagcagtgagcctacatttgttgaagagaaagaagttacagagctgaaaacagga
gaggttgatgaagctggagaaaaaggaaggggaggagatacagaagtgggtgtggaatct
gtagcccagaccacagagggctcagatgtcacatataagaaagatggtcgtcggaagaag
aaacacaaatccctctttcctctgagtcggagtcaggacaacagaggcaagctgtatcat
ctagaggactgtgttacactggcacaccataaatacggtacagatgatgcagggagaccg
tttactacagcccatccagcagtgggagaacaggtacactcaacagatcccagcgaggct
gtatcatctgctagactccatccgggtgtgggagatgccgtccatcttggcctgtttgct
gataggagggcagcatttgcaatgttcagagaggaaggtatttaccacagtgaagctggt
aaccgagaccaaagacagtgtctggacatgtggaaggggaatttagctggcaccctagct
catgcaagagaatgcaatcagctcaacagttttcttgttgccatggcaccgttaggtggt
tatgatgtttggctggagacagttgaggcctatgcccagcaactggagagatgtgaggac
tacagtcaggctgctacctactacctcgcctgccacaagatacataaagctatagcagtg
ctgctagataacaaactcttcagagaagctgtggcattagcgtctgtgaggctttcccca
tttgatcctgctttcactgaggtatacagagcctgggcaagtcacctggatgctgagggc
agctacggccaagctgcaaagtgttacctgacaatcaaccaacctactgatgcagtgatg
ttgctcgccagaaagagtgacatcctgtctctctctgccgctttgcgtgtggcttgtatc
actcacctaggtgacctgactatcggtttgatggtcagatacttgcatgagtgtctcatg
gctggtgattggctagaagcacaaacggtgttagccaatcataaaagtgttttagcaggg
agcttaattgcggctctgcacgaagtcatcgtcacaacactaacacatcaaaagctcata
ctacgggatctgtttgaggaaccaaagaccaatccctggattcaggggatgttccgagat
gagacaaacaacatggatgacttgtcgggatggactgttcctctttttgaaggagctaca
ccccttcctgctgctgtgcagcattggttcctacaatgccacatggaccaaacagatgaa
gaccttgtccaacgtctatatgatgaagttgtcagcatccgacaacagaatactcaacat
ttgccaacaaagcagcttcttatcgagttggcatttgagcttaccctgggtcagctgtca
ctcttgatggcaggggagtctgagacggtccctcattggttgcaggccgtggtcatgtgt
catgatgcaggggatgtggacatggctagaggagtgctatctcttgttctacctgaaggc
atttattccatcatgaaactacacaagagtgccgctgtcacgagtctgtatgcatactac
ctcttcactgttctgtactccctgtggtgggaggttggctgtgagacaacaccctccaag
aatcctgaactgctggtgagtaaagctggtgtgccacgagatactcaaagaggaatagag
acaaacagcgacactgccaacataattgcaagaagaacagaagcaacagaatcacacttg
gagggtacaagtggcacagtgtcacgagtgatggcgactgaaagagcttcagaattggtg
gaaaatcctggccaacctattgcagacttcactgggagtgtcagtgagacgcaagcacaa
atcacatttgaccagcatgatctttttacgacattgactgattgtacaaaccaaagtgtg
gagtcatatgcagccagtgccagcattgtcactgctccttcatgttccaacatgtcaaaa
gatgtcaaccaagggcatgatgcgactcgcagccagttcgaagaaaggctggttccaaaa
ctagagactatctccaaggctttgttgtcggagcctcacgcaaaagtgagaagcctgaag
ggcagcataagatgcatccagaaggcggtggagaaattggtgacccagcatgccacaaaa
gggcaggaaccggtccctgttgaccatgaccaggagggctctattgacaaagatagggct
cctgacagaccagaccatgaggctgttgattgtggcttttatgcctccagagagaatgaa
tcagccgtcccaactgtcaaagatggtggtgcttttgagctgaaggaacgtgccacatct
ccagatgtgtgtgctttaagccaaattgtttctgagagcactggcagattagtaaactca
tgcttaccagagtctctaaacccccttgaggtcagtaccaacattgtatcatctcgccag
gacgacgggacaccagttgaagtggatatagccactgaaaaacagtttgattcaaactct
aacgctgctgctaaagaaactcattcagaggtagacaaatatttggaagtctgtctacct
agtagctgggaggcagtgatggcagatgtcaagtatattgatccagcattgacgtatact
gacttgctccaagagcaaagcaggctcatgcaggaattggaacaacttggcaaaaggtgt
ccattcccagactcagtcgagtctgccatggtgctggtacatgtctgccgtgccgcacgc
ctcaagaggaatctctcaaaagcagatcagcaggagctgaagacacttgagaaggaagcc
atcacatggggactggagcacagttggctgaccttccaaaggaaactgttcattaagcat
cttgcaaatttagttttagaacaacccaacagtgctttgtaa

DBGET integrated database retrieval system