Acanthaster planci (crown-of-thorns starfish): 110976448
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Entry
110976448 CDS
T05078
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110976448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110976448
Spliceosome [BR:
aplc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110976448
Complex C
U4/U6.U5 tri-SnRNP related factors
110976448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
110976448
NCBI-ProteinID:
XP_022085407
UniProt:
A0A8B7XYT1
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MPQKSNTLPVWGNEASMNLNPLILTNIQSSPYFKNELFKLKTYHEVVDEIYFKVDHLEPW
ERGSRQTSGQIGMCGGVRGVGAGGIVSSAYCLLYKLYTLKLTRKQLNGLLTHIDSPYIRG
LGFMFVRYTQPPADLWEWLEPYLEDEEEIDCKAGSGSVMTIGEMVRSFLTKLEWFSTLFP
RIPVPIMKDLEVKLQEWKVGFLERQRQQQLEEGTEEDGYQEIEGGRDAERQPRNREKTRS
RSRDRHRSRSKDRFRSRSKDRRRSRSRERRSRNDDRHRRSRSRERKRRSRSSERRHRRSQ
ERSRERRRSRSRERRRERDGDDYSRALQRERERQQRERRERRSSSRERRHSRDRDRRSNR
DRRRSRSSDRKKSHSVDKERRRSHSPSQGRR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaagagtaacactttaccagtctggggcaatgaggcgtccatgaacctcaac
cccctcatcttgaccaacatacagtcctcaccttacttcaaaaatgagctcttcaagttg
aagacctaccacgaagttgtggacgagatctatttcaaggttgatcatttggagccatgg
gaaaggggcagtcgacaaacgtctggtcagataggcatgtgtggtggggtacgtggcgta
ggggctggaggcatcgtctcctcggcctactgtcttctctacaagttgtacaccttgaag
ctgaccaggaaacagctgaacggcctccttacacacatagattccccttacatccgaggg
ctgggtttcatgttcgtcagatatactcaaccacctgctgatctgtgggagtggctggaa
ccgtatctggaggatgaggaggagatagattgcaaggcagggtctggtagtgtcatgacc
atcggtgagatggtgcgcagcttcttgaccaagctggagtggttctcaactctctttcct
cgcataccggtgcccatcatgaaggaccttgaggtcaagttacaggaatggaaggttggt
ttcttagagagacaaagacagcaacagttggaggagggaactgaagaggatggataccag
gagattgaaggcggcagagatgcagagagacagccaagaaatagagaaaaaacacgcagt
agaagtcgggaccgccatcgcagtcgaagcaaagaccgttttcgcagccgaagcaaagac
cgccgtcgcagtcgcagccgggaacgccgcagccggaacgatgaccgccaccgaagaagc
cgcagtcgggagcggaagcgacgcagcaggagctctgagaggaggcaccgcaggagccag
gagaggagcagagagagacgacgcagtaggagccgcgagagacgacgggaacgcgacggg
gatgattactcgcgggccctgcagcgcgagcgggagcgccagcagagggagcgaagggaa
cggcgcagctccagccgagagagacgccacagtcgggaccgggaccggaggagcaaccgt
gacaggcggagaagccgatcgtccgatcgtaaaaaatcacattccgtagataaagagcgc
aggagaagccacagtcctagtcagggacgcaggtga
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