Acanthaster planci (crown-of-thorns starfish): 110976711
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Entry
110976711 CDS
T05078
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110976711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aplc03021
]
110976711
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110976711
Transcription machinery [BR:
aplc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110976711
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110976711
U7-dependent histone pre-mRNA processing factors
110976711
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
110976711
NCBI-ProteinID:
XP_022085906
UniProt:
A0A8B7Y1S5
LinkDB
All DBs
Position
Unknown
AA seq
1526 aa
AA seq
DB search
MDSERSRRSIASQYFMDEDSTTADMAEGINTSDRVIDLINQTHLLTKDSQKIANLKHVQE
LIVHKDPTLLDNFLDEVLQFQHDKSADVRKFVVGFIEEACKKDNDMLCSVIPHLNMMLSD
SAQHVAVIKKVILCSMQLYKIALKWLVNARTFGEEMEAVWDQIQEIKRKVFIMLDSENDG
IRTHSTKYMESLILVESARVAGSEIPKKPEADISLDQIPEEHGLLKREELEKDGLHAFEL
LLDLLASPSITSVNLMACMGSLTTIAKQRPQFMARVIQAFETLHVNLPPTLAKSQVSSVR
KHLKMQLLNLLKHPSSVSLHSNITTLLTDLGASEAEISKHMPKVRESFKRPRPADDEGSS
NSKKPKTTTVKTIQQVMDEDEMGRETPLHPTLLPSMPSTSKATIQAPAKISVVDLLAEEL
TPLLQNVENVANLVLISMVTLPETMPPQFQASYTPIAAAGTDSQISHLARMMSSQFATAG
IKPQNMEMLEQEEEAADKENKSAVTQKPTGIPVLGEAEEDTGRKKSGLSFQAPVGVPKPR
ARMKQFKLSDVTVPLEQMVANKLVSGAVSRIITSEKMSQQGGASQARIKILVGLVSQFSE
MSQQGGASQARIKILVGLVSQFSGDLFPMLKDHVLEDLRSRSELAFAWLYQEYSSYQGYM
PRYLDQEVSMNRYDKLLCAMLMALLDRPDQRDGLFTRLVMEAPVITERAVKVIRKFCEDE
THFFTGMHALRELILKRPADIQRYLQELLELTFHERTEVRSQATQYVKRLYERQDLKETI
EEFASKCLHYLLSDVPNPSLVSRTSEGGEGGSDWTEASIKLCLHLYLALLPSNHKLIHEL
ATVYVATSALIKRTVLRVLEAPVRGMGMSSPELLLLVENCPKGAETLVTRMLHILTDKAP
PSQDLVKRVRDLYLKRVSDVRFLIPVLIGLEKKEVIAALPKLIKLNPIVVKEVFHRLLMS
HQGDNSAGQSPLTPAELLIALHNIDTSKCDIKSIIKATSLCFNEKAIYTQEVLAVVMQQL
MEQGTVPTLLMRTVIQSLGMYPRLSGFVMNILQRLIVKQVWNLPKVWEGFVKCCERTKPQ
SFQVLLQLPAEQLKNVFEMSPDMRAPMLAHVQTFTPHQQAHIPPPIMTVLETDPLAEKKK
MEEEERKKREEELRIKMEAEEKQKEEERLLQEKLAEERRKQEQLKKEAAEKAAKEKAEKL
KAQREAEEKKRKEAEEKLARERQEKMRAEQEASLKAAREAGERVAREARERREKREAARE
AGIKAAMEAKEKKEKMEAEERARRQEEQQKAALARQEEMEKKKQEEEQKKQEEIKRKEEE
ALKREEEERRQQEEQKSRQEEENKKREEETLKQEEEKIRQEVEAEKKRQEELEAERRIKE
QIQEDQEMQEMVTVKQEPDELKEFEAAAHQEMPLKIKQEKPDQEAQEATVDTEFKIKKEV
EDYPEQEAVENPFQETVEDESQSSNPVASAELESEDTGDGSVQSEMPSPAGRGRGRGRGG
RGRGRGAKKTATPSPSGTRKSTRKKN
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggattcggagaggagtcgacggtcgattgcctcgcagtattttatggacgaggattcc
acgacggctgatatggcagaaggaatcaacacctcagacagggtgattgacttaatcaac
caaacacacctgttgacgaaggattcccagaaaattgctaatctcaaacatgtacaagaa
ctgattgtgcacaaggatccaacactactggacaatttccttgatgaagttcttcagttt
cagcatgacaagtcagcagacgtcagaaagtttgtggttggatttattgaagaagcgtgc
aagaaggataatgacatgttatgcagtgtgattccacatcttaacatgatgctgagtgat
tcggcccaacacgttgcagtcatcaagaaggttatcctgtgcagcatgcagctctacaaa
attgccctgaagtggttggtcaatgccaggacgtttggcgaagagatggaagcagtgtgg
gaccagatacaggaaatcaaacgcaaggtgttcatcatgctggactctgaaaatgacggc
attcgtactcactccacaaagtacatggagtctctcattcttgtggagtcggccagagtc
gcgggatctgagatccccaagaaaccagaagcagacatctccctggatcagattccagag
gagcatggacttttgaaacgtgaggagttggagaaagatggccttcatgcatttgagcta
ttactggaccttctagcctccccaagcataacaagcgtcaacttaatggcatgtatgggc
tcccttactactattgccaagcagcgaccacagttcatggccagggtcatccaagctttt
gaaactcttcatgtaaatctaccgccaacattggccaagtcacaagtgagcagtgtacgg
aagcacctgaagatgcagttgttgaacttgttgaaacatccctcgtctgtcagtcttcat
tccaacatcactacactgctgacagacttgggagcatctgaagcagagatatccaagcat
atgcccaaggtgcgtgagagcttcaagcgacctcgaccagcggatgatgaaggatcatca
aacagcaagaagccgaagacaaccacagtgaagacgatccagcaggtgatggatgaggat
gagatgggacgggaaactcccctccatcccaccctcctcccctccatgccgagcaccagc
aaagccaccatccaggccccagctaagatctcagtggtggatctcttggctgaggagctc
acaccgctgcttcagaacgtggagaatgtggccaaccttgtactcatcagcatggtgaca
ttaccggagactatgcccccacagttccaggccagctacacccccattgccgcggcaggg
acagacagccagatcagtcacttggctcgtatgatgagtagtcagtttgctacagcaggc
atcaaaccacagaacatggagatgcttgagcaagaggaagaagctgctgacaaggagaac
aagtctgccgtgactcagaaaccaaccggcattcctgtcctaggagaagcagaggaggac
accggccgaaagaaatcagggctgtcgttccaagccccagtaggtgtccccaagccccgg
gctagaatgaagcagttcaaactgagtgatgtaaccgtgccattggagcagatggtggct
aacaagctcgtcagtggggctgtctccagaattatcacctccgaaaaaatgtctcagcag
ggaggggcatcccaggcccgaatcaagattcttgtgggccttgtcagccagttcagcgaa
atgtctcagcagggaggggcatcccaggcccgaatcaagattcttgtgggccttgtcagc
cagttcagcggtgatctttttccaatgctgaaggaccacgttcttgaagatttgcgctca
cgctcggagctggcctttgcttggctgtaccaggaatacagcagttaccagggttacatg
cctcgatatttggaccaggaagtcagcatgaatcgttatgataaactgctgtgcgctatg
ctgatggcactgttggacagaccagaccagagagatggactgttcacacgccttgtaatg
gaagcacctgtaatcaccgagagagctgtcaaagtcatccgaaagttctgtgaagatgag
acccatttcttcactggcatgcatgccttgcgtgagctaatcctcaagcggccagcagac
atccaacgctacctgcaggagcttctggagttgacattccatgaacggacagaagtcaga
tcacaggccactcagtatgtcaaacggctgtacgagagacaagacttgaaggaaacaatt
gaggagtttgcgagcaagtgtctccattacttattgagtgacgtgccaaacccctccctc
gtcagtcggacctcagagggcggtgaaggtggcagtgattggacggaagcctccattaaa
ctgtgcctgcatctttacctggccttgctgcctagcaaccacaaactcattcatgaactt
gcaacggtttacgttgccacctctgctctcatcaaaagaactgttctacgagtccttgaa
gcaccggtgcgagggatgggcatgtcttcccccgaactactgttgctggtcgagaactgt
cctaaaggagcagagacactggtcactagaatgctccacatactcactgacaaagcccca
ccatctcaggatcttgtgaagcgagtgcgtgacctgtacttgaagcgtgtctccgatgta
cgcttcttgattccagtactgattggattagaaaagaaagaggtgatagcagcgctaccc
aaactgatcaagttgaaccccattgtcgtgaaggaggtgttccatcgtctactcatgagt
caccagggggataatagtgctggtcagagcccactgacaccagccgagctgctgattgca
ctgcacaacattgatacttccaagtgcgatatcaaatcgatcataaaggccaccagtcta
tgcttcaatgagaaggccatttacacccaggaagtccttgctgtggtcatgcagcagctg
atggagcaaggcaccgtacccacgctgctcatgcgtaccgtcatccagtccctgggcatg
tatcccagactcagtggctttgtcatgaacatcctgcagcggctgattgtcaaacaggtc
tggaatctgcccaaggtctgggaggggttcgtcaagtgctgtgagcgcaccaagccacag
tctttccaagttcttcttcagctcccagctgaacagcttaagaacgtctttgagatgagc
cctgacatgcgagctccaatgctggcacatgtccagacctttacaccacatcagcaagca
cacatccctccgccaatcatgacagtcctggaaacagatcctctggctgagaaaaagaag
atggaagaagaggaacgcaaaaaacgagaggaggagcttaggatcaaaatggaggcagaa
gaaaagcaaaaagaagaagagcggcttcttcaggaaaagctggccgaggaacggaggaag
caagagcaactgaaaaaggaggctgctgaaaaggcagccaaggagaaagctgagaagttg
aaagcgcagagggaggcagaggaaaagaagaggaaggaagcggaagaaaaattggcaagg
gagaggcaagagaagatgagggctgagcaagaggccagcctgaaggcagcgagggaggca
ggagagcgagtggccagggaggcccgggagaggagggagaagagggaagctgccagggaa
gctgggatcaaagccgctatggaggccaaggagaagaaagaaaagatggaggctgaggaa
agagccagaaggcaggaggagcaacaaaaggcagcacttgcccggcaggaggaaatggaa
aagaagaaacaagaagaggagcagaagaagcaggaagaaatcaagaggaaggaagaagag
gctcttaagagggaggaagaagagaggagacagcaggaagagcagaagagtcggcaagaa
gaggagaacaagaaacgtgaggaggagacactaaaacaggaagaggagaaaattagacaa
gaagtggaagcagagaagaaacgacaagaagaattggaagcggagaggaggataaaagaa
caaattcaagaagatcaggaaatgcaggagatggtgactgttaagcaagagcctgatgag
ctaaaggaatttgaggcagctgcacatcaagagatgcccctgaaaattaagcaagagaaa
ccagaccaggaagcacaggaagccacagttgacacagagttcaaaattaagaaagaggtc
gaggactacccagagcaagaagcagttgagaatccatttcaggaaacggtggaagatgaa
agccagtcctctaacccagtcgcttctgctgaattggagagtgaagacactggagatgga
tctgtacagtcagagatgccgtcaccagcaggaagggggagaggccggggaagaggaggg
cggggtcgtggcaggggagccaaaaagacagcaacaccctccccctcgggtacacggaag
agcacaaggaaaaagaactag
DBGET
integrated database retrieval system
