Acanthaster planci (crown-of-thorns starfish): 110977227
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Entry
110977227 CDS
T05078
Name
(RefSeq) THO complex subunit 2-like isoform X1
KO
K12879
THO complex subunit 2
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03013
Nucleocytoplasmic transport
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110977227
09122 Translation
03013 Nucleocytoplasmic transport
110977227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110977227
03041 Spliceosome [BR:
aplc03041
]
110977227
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110977227
Spliceosome [BR:
aplc03041
]
Complex C
Other components
EJC/TREX
110977227
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110977227
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
110977227
NCBI-ProteinID:
XP_022086854
UniProt:
A0A8B7Y112
LinkDB
All DBs
Position
Unknown
AA seq
1549 aa
AA seq
DB search
MHAGVSSLLADIFSIVDIETTSQECKPETETGAKSERENFVELLRKCVSFVTGPVLKERM
EYETLGEIKVITKDAFKQKYVRLKTKLFYKQQKFNLLREESEGYSKLGAELAQVTSSQSN
HEQLLESIKSLIGCFDLDPNRVLDIIMEAFECTPHMDQLFVPLLQNYMCEPLTICHMLGF
KFHFYKEENITTPESLHRLAALLLQHELVDLDNLYPHLMPADTDIIQGYKKSITEARQFA
RKMTIVLLSDREKEEEEAEKEKKENKDDKPPDNQKLGLIEALLRIGDWSHAQKLIDRLPQ
YCAVAKRPVANALCDLVGALIDPLYKQFGMPKGAKSIVLSPPAGCKSVAVPARILDLCPA
FRMCNYLGPYAGAQPALLWKLVRLGKTLMSKRAAASESERDQWEEVYRQLLSLIEGTLLP
SMSTLDNNACLSEEMWSLLKLMPYNIRYCLYGRWKNSTYAIHPPLIRIKAVTTDRAKYIM
KRLTKDNVKPLGRQIGKLSHVNPGILFEYVLSTIQRYDNFIGPVVDSLKYLTSLSYDVLA
YCVIEALANPEKERMKHDDTNLSLWIQSLASFCGTMFRKYNIELTGLLQYVTNQLKAGKS
YDLLILREIIVKMAGIEITEEMTPDQLDALAGGELLRAEGGYFSQVRNTKKSSQRLKDAL
LTDHLAVALCMLMSQERFNVVFKGGSDGHVKLLGQLHDQCQDTLVQLGNFLANQLGTEDY
AKHLPALSTMVTEYHLTPECAFFLYRPMCMHAINSKFDELRKQERSANNSQKLSSLQKMQ
CYVTAVHTVLASLVESVRALHIPKVWDDISPQFYCTFWTLSMYDLYVPSISYDKEVNKIR
AQVNSLEDNKDMVSTKRKKERERHNMIMDKLRDEEKKQAEHCSRVLARLKSECENWFTAR
STKNETITQFLQLCIFPRCCFTASDALYCARFVLTVHQLKTQNFSTLLCYDRVFQDITYT
LASCTENEASRYGRFLCEMLKTVQRWHSDKVIYEKECGNYPGFVTVLRASGTESSNKADQ
LDYENFRHVCHKWQYKLTKAVVSCLESKDYTQIRNTLILLTKILTFFPLVLNLSAVLEKR
VDKIRLEEKDKRPDLFALAMGYSGLLKARKPHMIAEDQFHSKDTKAQPTSAATSKKASAQ
PSATPTASPATSADRADSSAATGKESSVASQEKPSGTRPSSNHPTAPVKKSSNSASSSPV
VVKAEPRSEERKEEKVTKEAKVHGEDKGQKEDKGKNHKDKVRRKEEKTLRSEKSSSEEVK
KESRKSGSKELEKTPKSSEEGKHRDYEKDRQEKRVPSAEQGQDKTHKSKRTSGVEVDARE
DKRSSSERLQRGESIASNSSQASSGAGSRRVSPGREATTEREHKRRKVGHQSPNTSTQTQ
EKGRDAERDSYDRGERDRESRRDKEKKTGEKKREHSEGERDGGHESKRRKDEESGGRKSS
SSPSAREERDRQKTPKTSSSRPTSSGDATVNGERSSGAKKDTPKERERSSSKSRKEGRGE
EEKSSKRESRGGEDGRKEDVRKEEARKSKREAKEEEDDRHHSSSRKRRP
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccggtgtgagctctctgttagctgacatcttcagtattgtagatattgagaca
acaagtcaggaatgcaaaccagagaccgaaacgggggctaaatcagagcgggagaacttt
gtggagctactgagaaaatgtgtcagttttgtgactgggccagttctgaaggaacgcatg
gagtatgaaaccctgggcgaaatcaaagtcatcaccaaggatgccttcaaacagaaatac
gtccgactgaaaaccaaactattttacaagcagcagaagttcaaccttctacgtgaggag
agcgaggggtacagcaagctgggggcagagctagcccaggtgacctccagccaaagcaac
cacgagcaactgctggaaagtatcaagtctctgataggttgctttgatctagaccccaac
cgcgtcctggacattatcatggaggcatttgaatgcaccccacacatggaccagctgttt
gtccctctgctccagaactacatgtgcgagccgctgacaatctgccacatgctgggcttc
aagttccacttctacaaggaagagaacatcacaaccccagaatctctgcatagactagct
gccctgttactgcaacatgaactggttgacttggataacctatatccacatttgatgccg
gccgacacagacatcatacagggctacaagaagtccatcaccgaggcccgccagttcgct
cgcaagatgaccatcgttctcctgtcggacagagagaaggaggaagaggaggcggagaag
gagaagaaagagaacaaagatgacaagccccccgataaccagaaactgggcttgattgaa
gccttgctgaggatcggtgactggtcccacgcccagaagctgattgacaggctgccccag
tactgtgccgtagctaaacggcctgtggccaacgccctctgtgacctggtcggtgcactg
atcgatcccctgtacaagcagtttggcatgcccaagggagcgaagagcatagtcctctcc
cctccagctggctgcaagtcggtagccgtcccagcgcggatcctagacctttgcccggcc
ttcaggatgtgcaactacctgggtccctacgccggcgcccagccggccctgctctggaag
ctggtcagactgggcaagacgctgatgagcaagagagcagccgccagtgaatcagagagg
gaccagtgggaggaggtctaccgtcagttgctgtcgctgatcgaagggaccctgctgcct
tccatgagcacgctagacaacaacgcttgcctgtccgaggagatgtggagcttgctgaaa
ctcatgccttacaacatcaggtactgtctatacggccgatggaagaacagtacgtatgcc
atccaccctcccctgattcgaatcaaagcggtgaccactgaccgggccaagtacatcatg
aagcgactgaccaaggacaacgtcaagccgctgggcaggcagatcggcaagctcagccat
gtcaaccccggcatcctctttgaatatgtcttatcgaccatccaacggtatgataacttc
attggcccagtggtggattccttaaagtatctcacctcactatcgtacgatgtgctggcg
tactgcgtgatagaagccctagccaacccagagaaggaacgcatgaagcacgacgacacc
aacctgtcattgtggatacagagtctggcaagtttctgtggcaccatgttccgcaagtac
aacatcgagctgacgggcctactgcagtacgtgaccaaccagctcaaggcgggcaagagc
tacgacctgctgatcctgcgggagatcatcgtcaagatggcaggcatcgagatcaccgag
gagatgacccctgaccagttggatgcactggcggggggcgagctcctccgtgccgagggc
ggctacttctcccaggtgcgcaacaccaagaagtcctcgcagcgcttgaaggacgcgctg
ctgacagaccacctggcggtggcgctctgcatgctgatgtcgcaggagcgtttcaacgtg
gtcttcaaggggggctcggacggccacgtcaagctgctgggccagcttcacgatcagtgt
caagacaccttggtgcagttgggcaactttctggccaaccagctgggcactgaggactac
gccaagcacctgcccgccctgtccaccatggtcaccgagtaccacctcacgccagaatgt
gccttcttcctctatcggcccatgtgcatgcatgccatcaactctaaatttgacgagctg
cgcaagcaggagcgatcggccaacaacagccagaagttgagcagcctacagaagatgcaa
tgttatgtcaccgccgtgcataccgtattagcctcgttggttgagagcgtacgggcgctg
cacatacccaaagtgtgggatgacatcagtcctcagttctactgcaccttctggaccctg
tccatgtacgatctctacgtccccagcattagctatgataaggaggtcaacaagatccgc
gcccaggtcaacagcctagaggacaacaaagatatggtttcgactaaacgtaaaaaggag
cgtgagcgtcacaacatgatcatggacaagctgcgagacgaagagaagaaacaagcagag
cactgcagtcgggtactggcaaggctcaagagtgaatgtgaaaactggttcactgcgagg
tccaccaagaacgagaccatcacccagttcctgcagctgtgcatcttcccccgctgctgc
ttcacggccagcgacgccctgtactgcgccaggtttgtccttaccgtgcaccagctcaag
acccaaaacttctccacgttactctgctatgatagggtgtttcaagacatcacctatacc
ttggccagctgtacggagaatgaggccagccggtatggtcgcttcctttgtgaaatgctg
aagactgtccagagatggcacagtgacaaggtcatctatgagaaggaatgtggtaactac
cctggctttgtgactgtgctaagagccagcgggaccgagtccagtaacaaggcagaccag
ctggactacgagaacttcaggcacgtctgtcacaagtggcagtacaaactcaccaaggcg
gttgtgtcatgtctagagtccaaggactacacccagatcaggaacacgctgattcttctg
acaaagattctgacgttctttccgctcgtgctgaaccttagtgcagtgctggagaagcgg
gtggacaagatccgattggaggagaaagacaagcgaccggacctctttgctctggccatg
ggttactccggtctgctgaaggcccgtaagccacacatgatcgctgaggaccagtttcac
tccaaagacaccaaggcccaacccacctctgcggccacttcgaagaaagcctcagcccag
ccctcagccacgcccacagcaagcccagcaacctctgccgacagagccgactcttcagcc
gccacagggaaggaatcctcagtggcctctcaagaaaaaccatcaggaaccagaccgtcc
agcaaccaccccaccgcaccagtcaagaagtcctctaactctgccagcagtagccctgta
gtcgtcaaggcagaaccaagatccgaggagaggaaggaggagaaggtcacgaaggaggcc
aaagttcatggcgaggacaaaggtcagaaggaggacaagggcaagaaccacaaggacaaa
gtgcgcaggaaggaggagaagacgctgaggtcggagaagagctcgtcggaggaggtgaag
aaggagtcgcgaaagagcggcagcaaagagctggagaagacgcccaagagcagcgaagaa
gggaaacacagggactatgaaaaggacaggcaagagaagagagtgccctctgctgagcaa
ggccaagacaagacccacaagtccaagcggacgtccggcgtggaagtggacgcgcgggaa
gacaagcgcagcagcagcgagcggctgcagcggggggagagcatagcctccaactccagc
caggcctcctcgggggccgggtcgcgccgggtgtcacctggaagggaggctaccaccgaa
agggagcataaacggcgcaaggtaggccaccagtctcccaacacctccactcagacacaa
gagaagggcagggatgcggaaagggactcgtacgaccgcggcgagagagacagggagagc
cgacgggacaaggagaagaagacgggagagaagaaacgcgagcactcggaaggggagcga
gatgggggccacgaatccaagaggaggaaagacgaagagtcaggtgggaggaagtcctcg
tcttctcccagcgcacgggaggagagggatcggcagaagactcccaagaccagtagcagt
cggcccaccagctcaggagacgccacggtcaacggggagcggtcgtccggcgccaagaag
gatacccccaaagagcgagaacgcagcagctccaagtcccgcaaggaggggcgaggtgaa
gaggagaagtcctccaagcgggaatcacgcggtggagaggacgggcggaaggaggacgtc
aggaaggaggaggcgagaaagagcaaacgcgaggccaaggaggaggaagacgacagacat
cattccagctctcgcaagcgacgcccttga
DBGET
integrated database retrieval system
