Acanthaster planci (crown-of-thorns starfish): 110977280
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Entry
110977280 CDS
T05078
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110977280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110977280
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
110977280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_19
TPR_16
TPR_14
TPR_11
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_7
TPR_9
TPR_30
TPR_6
ANAPC3
ARM_TT21_C
DUF7017
DUF4363
DUF5421
HAT_Syf1_CNRKL1_C
TPR_20
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
110977280
NCBI-ProteinID:
XP_022086951
UniProt:
A0A8B7Y531
LinkDB
All DBs
Position
Unknown
AA seq
1556 aa
AA seq
DB search
MASSGSSTKEVKQLLKNAREAIRNKEYKEALKHCKSVLKQDKNNYNALVFVGVAAAELDQ
PDQAVAAYKKAIETDQQQPLAWQGLAGFYEKSQNPGHQPELADVYSQLRELLKTKEPKKW
QEVSEKLARLHCELGDIQQAVQVLRSIIQSKEMEDPSTRLGYWIQLANALAGAQELPDEY
VTLLERAYKTILKSGEDKQQHFCSYIKFLTKRNDIGDELVKTECLKMHELFPSDPYPLTI
LAGIYLQHSPECLDQVAVSVYDKLQTLDDASTVALLGIGQASLAKKDYLLARDRLQQGLK
GSRKSVHGWLYLARAQLGLHDNQASVESTHEGMKALTGNKKLAASRLKRELLMVQADALL
DAGTLTQTQKALQIYEKLLEQTEDSLQLGITCGLCTSLLILGNTEKADEIYKRALLIDAN
DSRVIALQGQIFINQKQLDKAEQRFIQALEGAPDCGLFHLWLGKVYWQMGRQTRTDRSKM
LASLLKAAKLDPYYSDTFLYLGHFYWQVAGDKSKGRKCYQKSYELNPQNEVAAAALGDAC
IELGEEDAALQLYRNVTKAAAAGTAKWAWLRLGLYYHKQGSCNDAVASFQAALRADPKDR
HIWECLGDAYMSRGSYTAALKAFSRGVELDPNAKYCLFQIAAIKQTLEAYAEAVTEYQVI
LDSDPDYIPALKGQGETYVRLARSSLHQYFNGRVVDYIKLAIQVLARAASLRPDLSCVWK
LLGDACTMLHPLSDKLISVQVPTNLLDHSFHGEASQNKKQLLCIGARCYGRALHLQSSCA
SLWHDLGRNYYYQSLSDLNNSAQLAVKALQCLKKAVVVDSTNHNHWTALGVIAAGKDVDN
PALAQHAFIKSIQVEANNVVAWTNLGALYLTKGNMELAHQAFKISQSLEPSYVNCWIGQA
LVAESSVPEEAMDLFRHTTELATHSEGAIGYAHWVCQTLLDPSLDKTSERYRYNIVQMDA
VSMATVGLDKVTDRIQNDACAYTMYGLLLERQGLHKSAEKAFARALELVHDTRDQERLNL
AKANHARSLCSVGHYEEAIKQFQGITPLIRLEEICNLALALYKTGNMQASYQAYEQALQL
AGDGGLRSQLLTCLGMVAFQCGDSNQAKTLLFQSSQESEPAPEGLLALLALGVHQEDMTL
ATAAVAELQKLKDKHGFVADVAFAGAVLYALQGQFHLACRQVTKATGRHPGLSELWRLMA
EVILQLLPQKAKAAIVCSHASLQDKEISKESVSTYALATLAVGQHGQLIPANQRCLSAAQ
KSVHIYPDSLENWAALSASYLSHGIWNATQNNKQHDDSNNLASKLATFVQSWAEKCGNSA
IQQWAGLQVVVSLMHEGRLQRADALTRKLEVIYQSQPDIKSALQLLQAQAVCMQHVSSQS
IELLRTVISRTSYQSLAAWQLLAKLYEQEGMVAAAESAYRQSLVHSHGQQLVPLLRLAHL
ALRATKASNEEHWAALVLEATNEALKLQPTCPIALLLQGLLHQHKGNTRQSKKCFQQVLE
MSRGDQMNLARSVARYHMMQHYASKKDANTAQILVEEAIQEQDPNLHLLQELVPSA
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtagtgggagtagcactaaggaggttaaacaactgctgaagaatgccagagaa
gcaataaggaacaaggaatacaaagaagcactcaagcattgcaagtctgtgcttaagcaa
gacaagaacaactacaatgccttggtgtttgttggtgtagcagcagctgagttagaccaa
ccagaccaagcagttgctgcctacaagaaagctattgagactgaccagcaacaacctcta
gcttggcagggtttagctgggttctatgagaaaagccagaatcctggccatcagccagaa
ctggccgatgtttatagtcagctgagagagttgttgaaaaccaaggaacccaagaaatgg
caggaagtttcagagaaactggcaagactacactgtgagctgggtgacatacaacaggct
gttcaggttttacgatccatcatccaatcaaaagagatggaagacccatcaacaagactg
ggatattggatacagcttgccaatgcactggctggagcccaggagttgccggatgagtat
gtcacactgttggagagagcttacaagaccatcttgaaatctggggaagacaaacagcaa
cacttctgcagttacatcaagttcttaactaagcgtaatgatatcggtgacgaacttgtt
aagactgaatgcctcaagatgcacgagttatttccctctgatccatatcctttgacaatc
ctggcagggatttatctgcaacattccccagaatgccttgatcaagtagcagtttctgtg
tatgataaactacaaaccctggatgatgcgtccactgtagcattacttggaataggacaa
gctagcctggctaaaaaggactacctgcttgcaagggacaggctgcaacaaggtcttaag
ggaagcagaaagagtgtgcatggttggctgtatcttgcaagggcccaacttggtctccat
gacaaccaggcatcagtagaatctactcatgaaggtatgaaagcattaactggtaacaag
aagctggcagcttctcgtctcaagagggagcttctaatggttcaagctgatgctctcctg
gatgcaggaactctgactcagacgcagaaagctctgcagatctatgaaaaactacttgaa
caaacagaagattcactccagcttggtataacctgcggattatgtacgtcacttctgatc
cttgggaatacagagaaggcagatgagatttataaaagagcacttctcattgatgctaat
gatagtagggtgatagcactccaaggccagatcttcatcaaccaaaaacaacttgataaa
gcagagcagaggtttatacaggcactagaaggagcgcctgactgtggactgtttcattta
tggctggggaaggtgtactggcagatgggaagacaaacaagaactgataggtctaagatg
cttgcatcattgttgaaggcagcgaaattggacccatactattcagacacgtttctttac
ctgggacatttctactggcaagttgctggagataaaagtaaagggagaaaatgttaccag
aaatcctatgagttgaacccccagaatgaagtagcagccgcagctcttggggatgcttgc
attgagcttggagaagaggatgcagccctgcagctgtatagaaacgtgactaaagctgct
gcagcagggacagccaaatgggcatggttgaggctggggttgtattaccacaaacagggc
agctgcaacgatgctgtggcaagctttcaagcagcactaagagctgatcctaaagacagg
catatctgggagtgtttgggagatgcatacatgagtagaggcagctacacagctgcctta
aaagctttctccagaggtgtagagctggaccccaatgccaaatactgcttatttcaaatt
gctgccatcaagcagacacttgaggcctatgcagaagctgtgactgagtaccaagtcatc
ttggatagtgacccagactatattcctgcccttaaaggtcagggagagacctatgtccgt
ctagcccgatcctctctgcatcaatacttcaatggcagggttgtggactacatcaaatta
gccatccaggtcttggctcgagctgcctccttgcgtcctgatctgagctgtgtctggaag
cttctaggtgatgcctgtacaatgctgcatcccctcagtgataaactgatcagtgtgcag
gtaccaactaatttattggaccattcattccatggggaggcttctcagaacaagaagcag
ttactgtgcattggagccaggtgttacggtcgagccttgcatctacagagcagctgtgct
tctctgtggcatgatctgggtcgcaactattactaccagtcactcagtgacttaaacaac
tcagcacagctggctgtcaaggctctgcagtgtcttaaaaaagctgtggttgtggacagc
acaaaccataatcactggacagcactgggagtcatagcagctggcaaagatgtggacaac
cctgctttagcacagcatgcttttatcaagtccatacaagtagaagctaataatgtggtg
gcctggaccaacctgggtgccctgtatctcactaaaggcaacatggagttagcccatcaa
gccttcaagatctctcaatctctagaaccaagctatgtcaactgctggattggtcaggcc
ttggtggcagaatcatcggttccagaagaagccatggatttgtttcgacatacaacagag
ctagcaactcatagtgaaggagctattggctatgcccactgggtctgccaaactcttttg
gatccctctcttgataagacctcagagcgctatcgttacaacattgtccagatggatgct
gtctccatggcaacagttggcctggataaggtcacagatcggatccaaaatgatgcatgt
gcctacacaatgtatggacttctgcttgaacggcaaggtttgcacaaaagtgctgaaaaa
gcatttgcaagggcattggagttggttcatgatactcgggaccaagagaggttaaaccta
gctaaggccaatcatgctagaagtctctgctctgttggccactatgaagaggccatcaag
caatttcaaggcatcactcctcttattcggctagaagagatctgcaatctagctctagcc
ctctacaagacagggaacatgcaggctagctaccaggcttatgagcaagccctgcaattg
gctggcgatggtgggctcagatcccagttactgacttgtctaggcatggtggcatttcag
tgtggggatagcaaccaggctaaaacactactcttccaaagttcccaggagtcagagcca
gcacccgagggtctcctagctctcctagctttaggtgtgcaccaggaagacatgacacta
gccacagctgctgtggctgaacttcagaaattgaaagacaagcatggctttgtagcggat
gtggcctttgctggggctgtgctgtatgctcttcagggtcaatttcaccttgcctgcaga
caggttaccaaagcaacaggaagacatcctggtttatctgagttgtggcggcttatggca
gaggtcattctccaacttcttcctcaaaaggccaaggcagccattgtctgtagccatgct
tccctccaggacaaagagatatccaaggagtcagtgtcaacatatgccttggccacccta
gcagttggtcagcatggtcaattaattcctgccaaccagcgatgtcttagtgctgcacag
aaatctgttcatatctaccctgactctcttgagaactgggcagccttgagtgccagctac
ctctctcatggtatatggaacgccacccagaacaataaacaacatgatgattcaaacaac
ttggcttccaagctagctacatttgttcagtcatgggctgagaagtgtggtaattcagcc
attcagcagtgggcggggcttcaggtggttgtcagcttaatgcatgagggcaggctacaa
agggctgatgcactcactaggaagttagaggtcatttatcagtctcaaccagacatcaag
tcagccttacagctcctccaagcccaggctgtctgcatgcagcatgtctctagtcagagc
attgagttactcaggactgtcatctcaagaacaagttaccaatcattagcagcttggcag
ttgctggccaagctgtatgagcaggaaggtatggtggcggcagcagagtctgcctacaga
cagagtctagtacactcacatggacagcagcttgtaccgttactcagactcgcccatctg
gctctcagagcaactaaggcaagcaatgaggaacactgggccgctctggtccttgaggcc
actaatgaggcattgaagttacaaccaacatgtcctatagcattattactacaaggactc
ctacaccagcataaaggcaatacaaggcaaagcaagaagtgtttccagcaggtgcttgag
atgtccagaggagaccagatgaacttagcaaggtctgtagctagatatcacatgatgcaa
cactatgccagcaagaaagatgcaaacactgcccagatcttggttgaagaagccattcaa
gagcaggatcccaaccttcatcttctccaggagcttgtcccatcagcatga
DBGET
integrated database retrieval system
