Acanthaster planci (crown-of-thorns starfish): 110978064
Help
Entry
110978064 CDS
T05078
Name
(RefSeq) collagen alpha-1(II) chain-like
KO
K19719
collagen type II alpha
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110978064
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aplc00536
]
110978064
Glycosaminoglycan binding proteins [BR:
aplc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110978064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Amnionless
Motif
Other DBs
NCBI-GeneID:
110978064
NCBI-ProteinID:
XP_022088426
UniProt:
A0A8B7Y9N7
LinkDB
All DBs
Position
Unknown
AA seq
2528 aa
AA seq
DB search
MRASMYSFVGRSARPRWGLLLLCLAVFCVMRISCQSPGSPASSSSSSSSSSPEDGGGGAK
KPPDDLPCKDNAGKISLHGETYKMTECSSCTCTNSTLNCMFESCQPTTCREPYKFPGECC
KACPYNVTVQQVTPVLPGAQSIQEGRAENDLAVNLDVLYANTRETTSVTGEGLWQTGMWM
SSEEDGSVKLPGTYVENVLTEGQQSQDLRKQGLVSTNFYINDIRYQVDMSDLTCDEARYL
CAKFNKGENPQVEKSFLEFHFEARPSEDVLTGCSPIEDCKGGALVQVNSVTPRMQENTVV
KEGNSNEVLVDMAVGYVDSEKTTNVDGENLWTTQMWLSGQMDGSRPLRGTLREQVLTPEQ
RSQSLVKDSSGVFNLNGIPYNFDLTGKTCKEAKYLCAKFNKNKDAQPSKEYSSFELEGVP
NEKALTGCSPLENCQGATFSGMSWSREVGQQQYGLPAPLTIDAQVTATPDSPSVDGTGLW
KMNIFGSRSMNGSGVRQNERTQILDGFNQGKSLSAGGGPLEFSDIQTRFPLDDLGCGEYK
YLCLEFTKGDNANPDYSYATTTGAQSIINCLPEKCRTVYVSGVQSTLGSADLYEGRPNNM
VQFDTIVQTTDESSPLVGRNMWRLNMYGSERPDGSGPRLAPQEQVLSDYYSSQELTTPGS
PLTFQPINTEYDMTDVDCKRLNYLCTEFSRNPESPVEFELSPVPDASVLRSCMEVPDEMC
NGVIIDDMDWEMQVLTDKVQAGRPTPVRFDVDVEPRPSAGSISGENLWRVGLFGSTRPDG
RGPRIGPQRQILTRDLSSRDLTASQTLQLDDINAEFDLTSIGCETEYQYLCLEFAKGLRA
EPDFKFQAANGGEVITKCKDQDCRKGVKIEDLNVVGNDYSVLKENDPYNRVMFDMTAETT
PDSGGVDGDNLWELSLFGSSSENGVGRRFNEQRQVLNNYQRNKDAFPGEDIDFGMVDSNF
NMQGLSCKEVRYLCAELRKGTRADPDFELNPVPDRSVLTKCFRQKCDGIIIDSTDLRGDF
DVDDNTDEVEFDVSVNSNPNSGDATGRNIWRLQTFLANYPDGTGNVRTLERQTLTPEMAS
RDLRSGSRLNFNNLAARINKDDLYCDEGERYICVKVERGDNPSIDYSLSGAREGSLQRCQ
KVNCVKAPEVVKGPIGDKGYPGEPAVMPREYMQGPPGLPGQAGPPGYKGPNGYPGQRGAP
GLKGPQGDPGLYGYPGAPGPPGPPGRPGEAIAPTYQQRYGSKNLPYGAGYAPQQVVQGPP
GPAGPPGSPGDRGPQGLRGVQGSSGPPGPVGPLGPAGSRGSDGEDGRDGSNGNRGSAGAP
GPLGATGPGGMPGAPGAQGHKGWRGARGRKGAMGDTGDVGDSGASGATGPAGAAGQRGDI
GPSGERGERGARGVAGVRGQDGSDGDVGNAGPQGGTGPMGAMGAAGAKGDAGPQGDQGIQ
GIQGQRGESGSDGAPGANGASGNDGQDGAAGAVGDVGGVGAAGPVGAPGARGSAGARGAT
GPGGEPGGQGYPGLAGSRGADGSRGVTGGPGPRGDPGVDGSEGAEGPDGPVGSTGPRGPA
GARGSIGSPGPGGPAGAMGMRGDIGGQGSTGLAGEKGDAGNPGQSGNPGAPGQMGSPGSD
GRTGNDGKPGPPGSAGSDGKPGPPGPNGIQGARGSVGLNGAPGAGGEEGRTGSPGATGPR
GAAGTPGDIGPQGPAGPAGAQGARGDAGPQGAIGPGGTNGGVGAPGPRGPQGKRGAPGVG
GPAGQEGPQGMSGDRGAQGPMGLAGATGPDGDAGVDGRDGRDGEPGDKGASGDVGRIGIP
GLPGAPGDRGGAGASGNVGAPGAQGATGQRGSAGQPGERGPLGPPGPGGSPGLRGDAGGI
GRSGRTGPPGPDGNPGERGRAGDRGAQGIPGGQGPQGADGARGEKGPKGNPGDQGVQGSV
GAPGRTGAPGATGAQGARGEPGESGPLGIGGNSGPVGLPGPSGAPGSRGEVGPPGPSGKS
GAPGQRGETGSSGPAGIRGVAGPQGPSGARGDDGRNGADGAPGPAGPQGPAGIIGEIGGM
GAMGAPGPTGPAGRPGADGAPGKRGSPGSDGAPGSSGVQGPKGPRGPTGSDGRDGSDGAT
GAKGGKGPQGDKGPQGPQGAAGSAGMPGRQGPSGGPGERGARGPAGPAGSRGSQGPDGDM
GPAGPAGPAGARGETGATGAQGHKGWGGAPGAPGPQGPKGPTGARGENGRTGAAGAPGID
GARGRNGKDGVQGPRGMTGPGGQRGPSGRSGPAGPPGPPGPAGAPGALSYSGYAYAGSYA
TSQVDKGPNPYATYYGDDATIDEDDYEARIIQLRNRIERLLLPNGEPEYPARSCKDLFRC
HPILPSGYYTLDPSGGSPYDKFVAYCDKKTNATCIYPDTKEIPKATYYLGEPEEVDFSNM
RNGSEISYSVKPVQLTLLRLIYSQAKQNLTYHCRNSHAVANKAGSMVKALTLVGPNDVRM
NIKNTRKDLQYEVEGEDGCQVHDNTWGKTTVSFTTKKTERLPLVDFAVSDVGRAKQQFGV
EVGPVCFS
NT seq
7587 nt
NT seq
+upstream
nt +downstream
nt
atgagagctagcatgtatagctttgtgggccgaagtgcccgcccaaggtggggcttgctt
ctactttgtttggctgtcttctgtgtgatgaggatcagctgccagtctccaggatcacct
gcatcatcatcatcatcttcatcctcgagttctccagaggatggaggaggaggagcaaag
aaaccacctgatgacttgccttgcaaggacaacgcaggcaagatatccctccacggagaa
acctacaagatgactgagtgttcgtcttgtacctgcaccaattccactctcaactgcatg
ttcgagtcctgccagccgacaacttgcagagagccatacaagtttcccggggaatgctgc
aaagcttgcccgtacaatgtgactgtgcagcaggtgacacccgtgcttcctggagctcag
tccattcaagaaggtagagcagagaatgatctggcagtaaatctggacgtgctgtatgcc
aacaccagagagaccaccagcgtcactggcgagggcctttggcagacgggtatgtggatg
agcagtgaggaggatgggtcggtcaagctgccgggcacctatgtggaaaacgtcctgacg
gagggccagcagtcccaggatctgaggaaacaggggcttgtctccaccaacttctacatc
aatgacatcaggtaccaggtggacatgtctgacctgacttgcgacgaggcccgctacctc
tgtgccaagttcaacaagggggagaaccctcaggtggagaagtcattcctggagtttcac
tttgaggcgaggccctctgaagatgtgctgactggatgcagtcctattgaagattgcaaa
gggggagcattggttcaagtgaacagtgtaactccgaggatgcaagagaacaccgtagtg
aaggagggaaactccaacgaggtattggtggatatggctgtgggctacgtggattcagaa
aagaccaccaacgtcgatggagaaaacctgtggacgacccaaatgtggctgagcggtcag
atggacggttcacgtcctctgagggggaccctgcgggagcaggtgctgacccccgagcag
cgttcccagtccctggtgaaggactcctcgggagtcttcaacctcaacggcatcccttac
aacttcgacctgacgggaaagacctgcaaagaggccaagtatctctgtgccaagttcaac
aagaacaaggatgcccagccgagcaaagagtattcgtcgtttgagctggagggcgtgccc
aatgagaaagccctaactggctgttccccgctggaaaactgccagggagctaccttttct
ggtatgagttggtctcgtgaggtgggacagcagcagtatggactacctgccccattgacc
attgatgcccaggttactgcaacccccgacagcccctcggtggatggcactgggctgtgg
aagatgaacatctttggcagccgcagcatgaacggcagcggcgtccgccagaacgagcgg
acccagatcctagacggcttcaaccagggcaaatcgctttcagctgggggcggtccactg
gagttcagcgacatccagaccaggttcccactggacgatctgggctgtggcgagtacaag
tacctctgtttggagttcaccaagggggacaacgccaacccagattacagctatgccacc
accaccggagcacaatccatcatcaactgtttgcctgaaaagtgcagaactgtgtacgtc
tctggtgtgcagtccaccctcggcagtgctgatctgtatgaaggtaggcctaacaacatg
gtccagtttgacaccattgtgcagaccaccgatgagagctcgccgctggtcggacgcaac
atgtggcggctgaacatgtatggcagcgagcggccagacggctcgggccctcgcctggct
ccccaggagcaggtcctgtctgactactacagcagccaggagctgacgacccctggcagc
ccattgaccttccaacccatcaacaccgagtacgacatgacagacgtggactgcaagcga
ctgaattatctctgcacggagttcagccgcaatcctgagtcccccgtggaattcgagctc
agccccgtacccgatgccagcgtgttgaggagctgtatggaggtgcccgatgaaatgtgc
aatggtgtgataattgatgacatggattgggagatgcaagtgttaaccgacaaggtacaa
gccggccgtccaaccccggtcagatttgacgtggacgtggagccgcgaccgtctgctggc
agcatcagtggagagaacctgtggcgggttggcctcttcggttccaccaggccggatggc
aggggcccccggatcggaccccagcgccagatactgacccgagacctctccagccgagac
ctgaccgctagccagaccctgcagctggatgacatcaatgccgagtttgacctgacctcg
atcggctgcgagacagaataccagtacctgtgcctggagtttgccaagggcctgcgagct
gagcctgacttcaagtttcaagccgctaatgggggagaggtcatcaccaaatgcaaagac
caagactgccgcaagggtgttaagattgaagatctgaatgttgtgggcaatgactactcc
gtgttgaaggagaatgacccctacaaccgggtcatgtttgacatgacggctgaaaccacg
cccgacagtggtggcgttgatggggacaacctgtgggagctctccctcttcggcagcagc
tcggagaatggggtaggccgtcgcttcaacgaacagcggcaggttctcaataactaccag
cgcaacaaggacgccttccccggcgaggacatcgactttggcatggtggactccaacttc
aacatgcagggcttatcctgcaaggaggtgcgctacctgtgcgccgagctgcgcaagggc
accagggctgaccctgactttgagctgaaccctgtgccggacaggtccgtcttgacaaag
tgcttccgccaaaaatgcgacggcattataattgacagcaccgacctgaggggtgatttt
gacgtagatgataacacagatgaggtggagtttgacgtgtcagtcaactctaaccccaac
agtggcgatgccactggacggaacatttggcggctgcagacattcctggccaactaccca
gacggcacaggcaacgtccggaccctggaaagacagaccctgacccccgagatggccagc
cgtgacctaaggtcaggttcaaggctgaacttcaataacttggcagcccgcatcaataag
gatgacctgtattgcgatgagggtgagcggtacatctgcgtgaaggtggagcgaggggac
aacccttccattgactactctcttagtggagcacgagaaggctctctgcagagatgtcaa
aaggtgaactgtgtgaaagctcctgaggttgtcaaggggccgataggagacaaaggatac
cctggtgagccagctgttatgcctagggagtacatgcaaggacctcctggactaccaggt
caagccggacccccaggatacaagggacccaatggatatcctggccagcgtggagcacct
gggctgaagggaccccaaggggacccaggtctctacggttaccctggcgcaccaggtcca
cctggtccaccaggccgccccggtgaggccatcgctcccacctaccaacaacgatacggg
tcaaagaaccttccctatggtgctggctacgccccccagcaagtggtacagggaccacct
ggtccagctggtccaccaggcagtcctggtgatcgtggtcctcagggattgcgtggtgtg
cagggatcttccggtccccctggacctgtggggcccctaggtccagctgggtctcgtgga
tctgatggggaagacggcagagatggaagcaatggcaaccgtggttctgcaggtgctcct
ggtccattgggagcaacgggtccaggaggaatgccaggagccccaggagcccagggccac
aaaggctggaggggtgctcgaggcagaaagggagccatgggggataccggagatgttggc
gactctggtgcatccggagccactggccctgctggagccgcaggacagaggggtgacatt
ggcccctctggggaacgaggagagcgtggagcccgtggtgttgctggagtgagaggacaa
gacggctcagatggtgatgttggcaatgctggaccccaaggtggtactgggccaatgggt
gctatgggagcagctggtgccaagggagatgcaggacctcagggtgatcaaggtatccaa
ggcatccaaggtcagcgtggtgagagtggatccgatggtgcccctggagcaaatggtgcc
tctggaaacgatggccaggatggtgcagctggagcagtgggtgacgtgggaggagtaggc
gctgcaggacctgtcggtgcacctggcgctcgaggctcagctggtgcccgcggagccact
ggacccggcggtgagcccggtggccaaggctaccctggactggcgggatctcgtggtgct
gacggctctcgtggcgtgacgggaggcccaggtccccgtggtgatcctggcgttgacggc
tctgaaggtgctgagggtcctgacggtcctgttggttctactggtccccgtggacctgcc
ggtgcccgtggtagcattggatccccaggcccgggtggtcctgctggtgcgatgggaatg
cggggcgatatcgggggacaaggtagcaccggtcttgcaggagaaaagggagatgcgggc
aacccaggacaatctggaaatcctggagcccccggacaaatgggttctccaggatcggat
ggtcgcactggaaatgacggaaagcctggaccacctgggtcagcaggaagtgacgggaag
cctggaccaccaggacccaatggtatccaaggggcaagaggttcagttggactcaatgga
gcgccaggagcaggtggagaagaaggaaggacgggatcccccggagccactggaccaaga
ggcgctgctggtacccctggagacattggacctcagggcccagctggacctgctggagct
caaggtgctcgtggagatgccggaccacagggagctatcggacctggaggaaccaacggt
ggagttggggcaccagggccacgtggaccccagggcaaacgcggtgctcctggtgtcggt
ggacccgcaggacaggagggacctcagggaatgagtggtgaccgtggtgctcaaggacca
atgggcttggctggagctacaggaccagacggtgatgctggggttgatggacgtgatgga
cgcgacggagaaccaggtgacaagggagcctctggtgatgttggacgtataggaatcccg
ggccttccgggagccccaggtgaccgaggtggtgcaggagccagtggtaatgtcggagct
cctggagcacaaggagcaacgggtcagcgtggatcagccgggcagccaggtgaaagggga
ccccttggcccccccggaccaggtggatctcctggactgagaggagatgcgggaggcatt
ggccgatctggacgaactggacctcctggacctgatggcaaccctggtgagagaggcaga
gctggcgaccgtggagctcagggcatcccaggaggacagggaccacaaggagcagatgga
gctcgtggagaaaagggacccaaaggaaatcctggtgatcaaggagtccagggatcagtg
ggtgctccaggccgtactggcgctcctggagccactggagcccagggagcacgcggggaa
ccaggcgaatcgggaccattgggcatcggtggaaattctggaccagtgggacttcctgga
cccagtggtgcacccggatcgcgaggagaggttggaccgcctggaccaagtggcaaatca
ggtgcacctggtcaacgtggtgagactggttcttcaggcccagcaggtatccgtggtgtc
gcaggaccccaaggaccttccggtgcacgtggtgacgacggcaggaatggagcagatgga
gctcccggtcctgctggaccacaaggcccagctggaatcatcggagaaatcggtggcatg
ggagcaatgggagccccaggaccgactggccctgctggacgccctggtgctgatggagcc
ccaggtaaacgtggctctcctggatcagacggtgctcctggatcctcaggagtccagggt
cccaagggaccacgcggacccaccggatctgacggcagagacggttcggatggagcaacg
ggtgccaagggaggaaaaggacctcaaggtgacaagggacctcaaggaccccagggagca
gctggaagtgccggaatgcctggccgacaaggaccaagtggcggtccaggtgagcgtgga
gctcgtggacctgctggaccagctggatcaagaggcagccagggacccgatggtgacatg
ggaccggctggaccagctggacctgctggcgcccgaggagagacaggtgcaactggcgcc
cagggccacaagggatggggtggtgctcctggagccccaggacctcagggacccaaaggc
ccgacaggagctcgtggtgagaacggacgaacaggtgctgctggagccccgggtatcgat
ggtgctcgaggcagaaatgggaaggatggagtacaaggtcctcgcggtatgacaggacca
gggggccaacgtggtccctctggaaggtctggaccagctggacctccaggacccccagga
cctgccggagcacccggagctctcagctattccgggtatgcctacgctggttcatacgcc
acttctcaagtggacaagggacccaacccatatgctacttattatggagacgatgccacc
attgacgaggatgactatgaggcccgcatcatccagctgaggaatcgcatcgagaggctg
ttgctacccaacggtgagccagagtatccagcccgctcctgcaaggatctcttcaggtgc
caccccatacttccaagtggttattacaccctggaccccagcggaggctctccgtatgac
aaatttgttgcttactgtgacaagaagaccaacgccacctgcatctacccagataccaag
gagattcccaaagccacttattaccttggcgaacctgaggaggtcgacttctccaacatg
aggaatggctctgagatcagttacagcgtcaagcccgtccagctgaccctcctgcgactc
atctactctcaggccaagcagaacctcacctatcactgcaggaattcccacgccgtggcc
aacaaagccggtagcatggtcaaagctctgaccctagtgggacccaacgacgtgcgaatg
aacatcaagaacacccggaaagacttgcagtatgaagtggaaggagaagacgggtgtcag
gtacatgacaacacctggggcaagaccaccgtctccttcaccacgaagaaaacggaacgt
ctacccttggttgactttgctgtgtcggacgtgggcagagccaagcaacaatttggggtg
gaagtcggccctgtctgcttctcgtag
DBGET
integrated database retrieval system
