Acanthaster planci (crown-of-thorns starfish): 110978065
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Entry
110978065 CDS
T05078
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc04512
ECM-receptor interaction
aplc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110978065
04518 Integrin signaling
110978065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aplc00536
]
110978065
Glycosaminoglycan binding proteins [BR:
aplc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110978065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
110978065
NCBI-ProteinID:
XP_022088427
UniProt:
A0A8B7Y793
LinkDB
All DBs
Position
Unknown
AA seq
1417 aa
AA seq
DB search
MYSFVELTSRYRRLLLVFVVLFMVANAQRAPSKLVGQKGDRGQKGEPGAPFVAGSGIGGG
ITGPPGAPGPRGPTGPRGDSGNSGPQGPQGMKGDPGVRGMIGLPGPPGKPGPPGSPGTIS
ASANVGQQAYKGVLPGGYQYPQASVQGPPGPRGLPGSPGQRGAQGMIGPAGPTGEPGSPG
PAGPAGPPGPPGRNGNDGDDGKDGSPGPAGPPGGTGARGAPGRPGSPGMKGHAGFAGLPG
MKGDTGSKGDRGADGATGPSGAPGLPGPAGPQGERGRTGSQGEQGPAGADGSPGSQGPSG
PPGPTGAPGMPGIQGPKGDAGSQGGRGPQGVQGVRGERGSDGSPGAPGAPGSPGRDGSVG
AKGPAGAVGPMGAPGFQGPTGPPGPAGAVGAPGAKGDQGAPGAPGDRGEDGPQGPAGATG
PQGAPGEAGQDGPRGARGSPGATGPIGPPGERGAVGPMGPAGAPGAPGPKGNLGERGPRG
EQGAKGNDGEPGRPGEPGIAGPRGLTGAPGKEGRDGKPGPPGPSGDDGRPGAPGAQGQRG
LPGIQGLPGTTGSPGDRGADGAPGPQGAQGATGEPGKQGNPGPAGPAGATGATGDRGPAG
AQGPAGPMGPPGPTGVPGDAGPAGDVGAPGDSGPAGPIGPRGERGSQGERGPPGAIGPPG
KRGTSGRSGSDGRKGDVGAKGDPGLQGPPGPQGAPGDRGPAGPPGPAGPTGSVGPTGAPG
PSGSDGAIGPMGPVGPSGAVGMPGEPGDQGEPGPAGAPGDRGDTGVQGAQGPPGPQGFAG
GPGRPGAQGPRGPDGPSGDKGEPGPAGPAGAPGDVGPAGAPGATGAPGDRGETGAQGAQG
PSGPMGPVGAPGLAGPQGSAGPAGPAGNDGAPGPRGESGATGRPGEQGPQGLPGPPGDRG
DRGGDGATGAPGPPGPAGPAGQIGNLGVNGAPGPRGPVGAPGAQGEAGRPGNDGSPGERG
APGAPGAPGPAGPPGDAGAPGENGNDGATGATGPRGDKGDQGPTGSQGAPGAPGIAGAPG
PAGSAGDRGDTGAPGPAGPAGPAGQRGNTGSAGPAGPAGPAGDRGATGAQGAKGHPGMPG
LPGIQGPPGIAGDSGPAGEAGAPGPRGAPGQRGANGKDGAPGGRGYVGNEGPRGPRGEDG
PQGPAGPPGPPGPPGPPGEVQASYGLSYPYAVGSVGKGADPYAGYYGDAATKAKAKPMDN
REISLVLASLDKQINDLKKPDGTKANPARTCKDLFLCNTEFTSGYYYIDPNQGCTADAIR
VYCDKASSESCVEPKVAEYEKRRWHVGPPKTVYMNSVNSGKMIEYNVTDLSQLTFLRLLT
TTVSQAFTYHCLNSNANLKLLTSIENIELTEDSEDPKNQYEVEEDGCSVKDGEWHATRVS
YTTSTRSSRLPIIDVATSDVGGADQQFGWEIEPVCFV
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgtatagctttgtggaacttacctcccgctacaggcggttacttctggtttttgttgtc
ctcttcatggtagccaatgctcagagagctcccagtaagttggttggacagaagggagac
cggggacagaagggtgagcccggtgcccccttcgtggctggcagtgggatcggcggaggt
atcaccgggcctcccggagcaccaggaccccgtggtccaactggaccacgtggtgactct
gggaattcaggaccacaaggcccacagggaatgaagggagaccctggtgtcagaggtatg
attggcttgcctggacccccaggcaaaccaggcccaccaggaagcccaggaacgatctca
gcaagtgctaatgttggacagcaagcctacaagggtgttctacctggtggataccagtat
cctcaagcctctgttcagggaccccctggtccacgtggtctccctggttccccaggtcaa
aggggagcacaaggaatgataggacccgctggcccaactggagaaccaggatcccctgga
ccggcaggacctgctggacccccaggacccccaggcagaaatggaaacgatggtgatgat
ggcaaagatggatccccaggacctgctggaccaccaggaggaacaggagcacgtggtgct
ccaggcagacctggcagcccaggaatgaagggacatgctggatttgctggtctacccgga
atgaagggagacacaggctcaaagggagaccgcggcgcagatggtgcaactggaccctcc
ggagccccaggactacctggaccagctggaccacaaggagagagaggacgcacaggatct
cagggtgagcaaggaccagccggagcagatggctcaccaggatcacagggaccatctgga
ccaccaggacccaccggtgctcccggcatgccaggaattcagggacccaagggagatgct
ggcagccaaggaggccgcggacctcagggtgttcagggcgtacgaggtgaacgtggatct
gatggttctcctggagcccctggtgctccgggatccccaggacgtgatggcagcgttgga
gctaaaggacctgctggtgctgttggaccaatgggagcgccaggcttccagggacccact
ggacccccaggacctgctggagctgtaggagccccaggtgctaagggagaccaaggagca
cctggtgcaccaggtgatcgtggtgaggatggaccccaagggcctgctggtgcgactgga
cctcaaggagcccctggagaagcaggacaggatggaccaagaggtgctcggggatctcct
ggtgcaactggccccattggacctcctggtgaacgtggtgctgttggccccatgggacct
gctggtgcccctggtgctcctggaccaaagggcaacttgggagagagaggcccacgggga
gagcagggagccaagggtaacgatggtgagccaggccgtccaggagagccaggaatagca
ggaccaagaggattgaccggtgccccaggaaaggagggacgcgatggcaagccaggacca
cccggcccatctggtgatgacggacgaccaggagccccaggtgcccagggacaacgcgga
cttccaggcatccagggtctgccaggaactactggttcaccaggtgaccgtggagctgat
ggtgcaccaggaccccagggagctcaaggagccacaggtgaaccgggcaaacaaggaaac
cctggacctgctggaccagctggcgcaactggtgccactggagatagaggaccagctggt
gcacaaggacccgctggaccaatgggcccacctggaccaactggagttccaggtgatgca
ggacctgcaggagatgttggagcaccaggagactctggaccagctggacctattggacca
cgaggtgagcgtggaagccagggtgagagggggccaccaggagctattggtccaccaggt
aagcggggtaccagcggacgcagtggttctgatggacgcaagggtgatgttggagccaag
ggagacccaggcttgcagggaccaccaggaccacagggtgccccaggtgaccgaggaccc
gccggacctccaggaccagctggacccactggatctgttggacctaccggtgccccagga
ccctcaggatctgatggcgccattggacccatgggccccgtaggtccatctggtgctgtg
ggcatgccaggagaaccaggagaccagggtgaaccaggaccggccggggccccgggtgac
cggggagatactggagtccaaggagcacagggaccgcccggacctcagggatttgcaggt
ggaccaggacgtcccggggcccaaggacctcgtggaccagatggaccttctggagacaag
ggagaaccaggacctgcaggacctgctggtgcccctggtgatgttggacctgctggcgcc
cctggagctactggagcacctggagatcgtggagagactggagcacagggagcccaagga
ccttcaggaccaatgggaccagttggtgctcctggactcgctggaccccaaggctcggct
ggacccgcaggacctgctggaaatgatggcgccccaggcccacgtggtgagtctggtgcc
actggacgcccaggtgaacagggacctcagggtcttccaggacctccaggagacagagga
gacagaggaggcgatggtgccactggtgcaccaggacccccaggacctgctggacctgca
ggacagattggaaaccttggtgttaatggagctcctggacctcgtggacctgttggtgca
cctggtgctcaaggagaggctggtcgcccaggcaatgatggatctcctggtgagcgtgga
gctcctggtgcccccggagcccctggacctgctggacctccaggagatgctggtgcccct
ggtgaaaatggaaatgatggtgccactggagccaccggccctcgtggtgacaagggtgac
caaggacctacaggatcacaaggtgcacccggtgcccctggcatcgccggtgccccagga
cctgctggatctgcaggagatcgcggagacactggagccccaggaccagctggacctgct
ggccccgccggacagcgtggaaacactggatctgctggacctgctggtccagctggacca
gcgggtgaccgtggtgcaactggtgcccaaggagcaaagggacatcccggcatgcccggt
ctgccaggcatccaaggacctcctggtattgctggtgattctggcccagcgggtgaggca
ggagctcccggaccaagaggagccccaggacagagaggtgccaatggtaaggatggagca
cccggtggccgtggatatgttggaaatgagggcccacgcggaccccgcggtgaggatggg
cctcaaggacctgcaggacctcccggaccccctggaccaccaggacctcctggtgaagtg
caagctagctatggattgagctacccgtatgctgttggcagcgttggaaagggagctgac
ccatatgcgggatattatggagatgctgccaccaaagctaaggccaagcccatggacaac
agggagatcagcctggtcctagcttccttggacaagcagatcaacgacctcaagaagcca
gacggcaccaaggccaacccagcacgcacctgcaaggacctgttcttgtgcaacaccgaa
ttcaccagtggctattactacattgatcccaaccagggatgcactgctgatgccatcagg
gtttattgcgacaaggcaagcagcgaatcatgtgtggagccaaaggttgcagaatatgaa
aaacgaagatggcatgtaggtcctcccaagactgtctacatgaactccgtcaacagtggc
aagatgatcgagtacaacgtaaccgacctgtctcagctgaccttcctacgtctactgacc
accacagtctcccaggctttcacctaccactgcctgaactcaaatgccaatctgaagctc
ctcaccagcatagaaaacattgaacttacggaagatagtgaagatcccaagaaccagtac
gaggtggaagaggatggatgctcggttaaggatggggaatggcatgcgacaagagtgagc
tacaccacatcaacaaggagcagccgtctaccaatcattgatgtagctaccagtgatgtc
ggtggagcagaccagcagttcggttgggagatagagcctgtgtgctttgtgtag
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integrated database retrieval system
