Acanthaster planci (crown-of-thorns starfish): 110978193
Help
Entry
110978193 CDS
T05078
Name
(RefSeq) uncharacterized protein LOC110978193 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110978193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110978193
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110978193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
UBA_Rad5
Motif
Other DBs
NCBI-GeneID:
110978193
NCBI-ProteinID:
XP_022088676
UniProt:
A0A8B7YAF5
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
MSRHRNVRGMDYGEDYEGYDDVYGHSVEDDYGVSPSTAEQFIYHRSLQHHRLASFLEEGE
DDLKKEEEDSRARRDSERSLGDSANYQRPQLSDIEEAQLQSCLEEIRNVVGETVPERTLI
EMAVAHSFNFEKALNAILDQQESGAGNNNNSQAQGGVSDFTIGKCNVVQRTADKKPSTKT
KDLLVNRKGQASIQKNQVGSPSSLSDLIKSNAIPYKQVSSNVSKVPLADLMKASHSTKCF
SSLAPSRPSAINPQISSLPLSALASSHLASSSKENSKAQGQGSSSLSDLATLHLGTNKGP
LAGGSGSAFSLSDLSQHSTLVTPPRMLPTKESQQLGAGGLKPGAGISLSSLASSHLSTKS
SKIQSMPSQRTSTISSSNVPPSGMEIGQGAQRPGAGTGSSLFSLATAHLSSSAHRVQAAV
KCPSIGQTPPTRPHGMAGLSLSNLAMAHQSSTLALPPAAMKPAGASLERLAKTHLSQDLS
AKSTLMSLNTKPATVDSHNPLPDAEPVKGSWSTLKNIPGELMVEKAAKMSAHSHSTVIPT
EESEIQLHKATSSTGPASPPGFQPVSAKSPPGFGSVTSEETEGSELKKRVPTPPGFQSRI
VSTPDHNSAVDIRSSDPHDYVNFPATTDQETKPLPKLHRLYVRQDRFYLLANPSVFGRAL
CSKYMDKSRELSDQRGLRIASYVFQKQHSRPTVNRQFSYQRQTSWSGGTADPGSEIIPFD
FSSPSPDDIIREKQAGAFCSTNGRSLGVAAQLPVKQPSPSRQKHMVPVAAATAMAANDTA
VSAVAQEVAKLSMPSKEAKRGFELGPVPAKSGDKRRKSAASRTKLGGEFLDGMPDSNLRS
ESKGKLPTVMSAPDLTSMAGSPAPALPGAQPSTRRESKTSKAGNIDISKEYSKRQEGKQL
INLVVIGHVDAGKSTLMGHLLYLLGQVNQRQMHKYEQESKKLGKASFAYAWVLDETGEER
QRGITMDVGLTNFETSNRIVTLLDAPGHKDFIPNMITGAAQADVAIMVVDATRGEFETGF
DAGGQTREHALLVRSLGVTQLAVAINKLDTVGWAEERFSEIVGKLGHFLKQAGFKESEVQ
YIPCSGLTGENLKDRATEPALTKWYKGPSLVERIDSLKAPKRPIEKAFRQCVSDVFKGIG
AGISIAGKIESGGVQVGDRVVIMPAGETGQVRGVYIHDEESRWACAGDYATVVVTSIDQV
NIGVGSVVCSIDHPIPVASRFRARVIMFNLDVPVTKGFPVLLHYQTVSEPAVICKLVSTL
HKSTGEVLQKRPKCLTKQSNAIIDIETSRPVCLELYRDCKDLGRFMLRYSGSTIGAGVVT
EVRDHVKTRPGQIAGGNIDFTHKKACIRPGQVNGCLYLASVQRTGGSV
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacataggaacgtcagggggatggactatggggaggattatgaaggctacgat
gatgtttatggacactcagtggaggatgattatggtgtgtctccatcaacagcggagcag
ttcatttaccaccgtagccttcagcatcaccggctggcatcctttctggaggaaggggaa
gatgacttaaagaaagaggaggaagatagtcgggcgaggcgagactcggaacgatccctt
ggagattccgccaactaccagcgaccccaactctcagatattgaagaggctcagctgcag
tcctgcctagaggagatccgcaatgtggttggggagaccgtccccgaacggaccctgatt
gagatggctgtggcacacagcttcaacttcgagaaagcgctcaatgccatcctggaccag
caggagagcggtgccgggaacaacaacaactcgcaagcacagggaggagtcagtgatttt
accatagggaagtgcaatgtagtacagagaactgctgacaaaaagccgtcaaccaaaaca
aaagatttattagtaaacagaaagggtcaggcatcaatacagaaaaaccaagttggttct
ccgagttccctttcagacctcattaaatccaacgcgatcccttacaaacaggtgtcgtcc
aatgtatcaaaagttccgcttgcagatctcatgaaggccagtcattccacaaaatgtttt
tcctctttggccccatcaaggccaagtgcaattaacccacagatttcatcgttacccctc
tctgccttagccagttcccatcttgcatcatcctcgaaagaaaatagtaaagctcaaggt
cagggttcatcatcactgtctgatctcgccacgttgcacttgggtacaaataagggaccc
ctggctggcggaagtgggtccgcgttctcattgtctgacttgtcacagcattccaccttg
gtaactccaccaaggatgctcccaactaaagaaagccaacaactgggagctggtggcttg
aagccgggagctggaatctctctgtcaagcttagcctcttcccatctctccacaaaatca
tccaaaattcagtccatgccctcccaaagaacaagtaccatcagctcctcaaatgtccct
ccgtccggaatggaaattggccaaggtgcccagaggcccggtgcagggactggatcgtct
ttgttcagcctagcaactgcccacctctcttcaagtgcacatagggtgcaagctgcagtc
aaatgtccctccattgggcaaactcccccgacaaggccccacggcatggctggactatct
ctctctaatttggccatggcccaccagtcatctacccttgcgttaccccctgcagccatg
aagccagctggtgcttccctagaaagactggcaaagacccacctgtctcaagatctcagt
gcaaagtctactcttatgtccctaaacactaagcccgctactgttgactcacacaacccg
ttgccagatgcagagccagtaaaaggcagttggtccactttgaaaaacattccaggtgaa
ttgatggtagagaaagctgccaagatgtctgctcactcacattccacagtcattcccact
gaggagtctgaaatacagctgcacaaagctacctcaagtacgggaccagcctccccaccg
ggattccaacctgtgtctgcgaaatcacctccaggtttcgggtctgtgacttcagaagaa
actgaaggaagtgaattaaagaagagggtaccaacaccccctggtttccagtcccggata
gtttccacaccagaccacaattcagcagtcgacattcggagttcagatcctcatgactat
gttaatttcccagccacaactgatcaagaaaccaaacccctgccaaagctgcacagactg
tatgtcagacaagaccgattctacctgctcgccaatccctctgtattcggaagggcactt
tgctccaaatacatggacaaatcacgagagctgtcggatcagcgagggctcagaattgcc
tcttatgtcttccagaagcagcactcaaggcccaccgtaaacaggcagttctcctaccag
cggcagacgtcttggagtggaggcactgccgacccagggagtgaaatcattccattcgat
ttctcttctccttcacccgatgacatcatccgtgaaaagcaggcaggagcattttgtagc
accaacggaagaagtctaggtgttgcagcacaactacctgtaaagcagccctctcccagc
cgacagaagcatatggtgccagttgccgccgccacggcgatggccgccaacgacaccgca
gtgtcggccgtcgcccaggaggttgccaaactcagcatgccatccaaggaggccaagagg
ggatttgaactgggtcccgttccagccaagagtggggacaagcggaggaagagcgcggcc
agcagaaccaagctggggggagaattcctggatggcatgcctgacagcaatctgagaagt
gagtctaaaggtaagcttccaacagtgatgagtgccccggacttgaccagcatggctgga
tcaccagcaccagcgctgcccggagcccagccctcgacacggagagagtccaagacctcc
aaagctgggaatattgatatatctaaagaatactccaaacgacaggaaggaaaacaactc
ataaatttggtggtgattggacacgtagatgccggcaagtcaacattgatggggcacctt
ctctatcttcttggacaggtgaaccagcggcagatgcacaagtacgagcaagaatccaag
aagttgggcaaggcatcctttgcctacgcctgggtgctggatgagactggggaggagaga
cagaggggaatcaccatggatgtaggcttaaccaattttgagacttcaaacagaatagta
acactcctagatgcaccaggacacaaagacttcattccgaacatgatcaccggagctgca
caggcggacgtggctattatggtagtggatgccactcggggagaatttgagaccggcttt
gatgcgggtggccagacgagggagcacgctctgctggtccggtcgctgggggtcacccag
ctggctgtggccatcaacaagctggacacggtgggctgggccgaggagcgcttcagcgag
atcgtgggcaagctggggcacttccttaagcaggccggcttcaaggaatctgaggttcag
tacatcccctgcagtggactgacgggagaaaacctaaaagacagggccacagaaccagca
ctcactaaatggtacaaaggtccatcactggtggagaggatagatagcttgaaagctcct
aaaagacccattgaaaaggccttcagacagtgtgtttctgatgttttcaagggtattggg
gcaggcatcagcatagctggcaagattgagtcagggggcgtgcaggtcggtgaccgcgtg
gtcatcatgccagcaggggagacgggccaagtacgaggtgtttacatccatgacgaagag
tcaagatgggcctgtgcaggagactatgcaactgtggtggtaactagtatcgaccaagtc
aacattggtgtcggcagcgtcgtgtgcagcatcgaccatcccatcccagtggccagtcgc
tttagggccagagtcatcatgttcaacttggacgtgcccgtcaccaaaggtttcccggtt
ttactgcactatcagactgtcagtgaaccagccgtcatctgtaaattggttagtactcta
cacaagagtaccggggaggtcctacagaagaggccaaagtgtctaacgaagcaaagcaac
gccatcatagacattgagaccagccggccagtgtgtctggagctgtaccgcgactgcaag
gacctgggcaggttcatgctgcgctacagcgggtcaacaatcggtgctggagtcgtcaca
gaggtaagggaccatgtcaaaactcgtccgggacaaattgcgggtggcaacattgacttc
acgcacaagaaggcctgcattcgtcccggacaagtgaatggctgtttatatttggcctca
gtgcagagaacaggtggctctgtataa
DBGET
integrated database retrieval system
