Acanthaster planci (crown-of-thorns starfish): 110978280
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Entry
110978280 CDS
T05078
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34-like isoform X1
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aplc03016
]
110978280
Enzymes [BR:
aplc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
110978280
Transfer RNA biogenesis [BR:
aplc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
110978280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
110978280
NCBI-ProteinID:
XP_022088848
UniProt:
A0A8B7Y6L2
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MEDDVQSLDEIRAEKQIELHLCKGKILVWDADDVKLLRQTHHIVGSLVGSLPRSPRQNAQ
LGLPLQLMPEEAAVLIEYADVAKMVNVKIKDPSADNVTSFEEARQKSFCEQQTMWDTVNA
KKKQDFANIIALGRTTKKHRRAERAKKQKRGKASSSVESRGDSTVRCASDSYKLLEEDGA
TRKRRKIQDDFSVVAEVENQEGSSAPSLATCYAEQAEDVTSENAESTRSRLESFLSNMES
SQLSPADCARTNDSDADKNIRRDVETVKLDAVKGGLREIKPFLEVDSNVADNSTVGHIQK
DVHIDEVKEEEKPSTVTDGSPKARLTISQQSMEDDFCSDLLPSEQQCGTSGPPGVVSDPG
PNTATDTSGPAPAPLSSPEHRPDDGDVFKKPPDPRPCSGYLVHIVTASPSTPREEVTEWM
YPTSQQELLKYRVFRDLWEMGYYLTSGCKFGGDFLVYPGKHCR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgatgtgcagtcgcttgatgaaatcagagcagaaaaacaaattgaacttcat
ctttgcaaaggaaagatacttgtgtgggatgcggatgatgtgaaattgctgaggcagact
catcacatcgtgggttccctggttggttcgctaccacggtcaccaaggcagaatgctcag
ctgggtcttcctttacagctaatgccagaggaggctgctgtgcttattgagtatgcagat
gttgcaaagatggtgaatgtgaaaataaaagatccgtcagctgacaacgtcacatcattt
gaagaggcaagacagaaaagcttctgtgaacagcaaacaatgtgggatacagtaaatgcc
aaaaagaagcaggactttgccaacatcatcgctcttggaaggaccactaagaaacatcga
cgggcggagcgagccaagaagcagaaaaggggaaaagcttcctcttcagtggaatcaaga
ggcgatagcactgtgagatgtgccagtgattcatataaattacttgaggaagacggagca
acaaggaagaggaggaagattcaagatgatttcagtgtcgtggcagaagtggaaaaccag
gaagggtcctcagctcctagcttagctacgtgttatgctgagcaagctgaagatgtcacc
agtgaaaatgcagagagtactcgtagcagactggaaagcttcttgagtaacatggaatct
agtcagttatctccagctgattgtgcaaggactaatgacagtgatgctgataagaacatc
cgcagagatgtggagactgtcaagttggatgcagttaaaggtggactgcgagaaatcaag
cctttccttgaggtggattcaaatgttgctgataacagtactgtgggtcatattcaaaag
gatgtacatatagatgaggtcaaagaagaagaaaaacctagcactgttacagatggatca
ccaaaggcaagattgacaatatcacagcaaagcatggaggatgatttttgtagtgacttg
ctgccatctgagcagcaatgcggaacaagtggtcccccgggggttgtgtccgaccccggc
ccaaacacggcgacagacacatcaggcccggcacctgctccgctctcaagtcctgaacat
agacctgatgatggagatgtgttcaagaaaccgcctgaccctcgcccctgttctggctac
cttgttcacatcgtcacagcctcaccttccactccaagggaggaggtgacagagtggatg
tacccaacgtcacagcaggagctgttgaaatacagagtcttccgagatctctgggagatg
ggctactatctcacgtcaggttgcaaattcggtggcgactttctggtgtacccaggtaaa
cattgccgatga
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