Acanthaster planci (crown-of-thorns starfish): 110978370
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Entry
110978370 CDS
T05078
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110978370
09123 Folding, sorting and degradation
03018 RNA degradation
110978370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110978370
03041 Spliceosome [BR:
aplc03041
]
110978370
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110978370
mRNA degradation factors
5'-3' decay
Lsm complex
110978370
Spliceosome [BR:
aplc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110978370
Complex C
U2 snRNP components
110978370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
110978370
NCBI-ProteinID:
XP_022089006
UniProt:
A0A8B7YBD2
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQFLNIKLSDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADECDTQLLQDAARKEAAQSKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcttttttactcatttttcaaatctcttgtggggaaagatgttgttgtcgagctgaag
aatgatctcagtatctgtggaacgctacactctgtggaccagttcctgaacatcaagctt
tcagatattagcgtgacagacccagagaaatatccacacatgctttcagtcaagaactgt
ttcatccgtgggtcagttgtaagatatgttcagttaccagctgatgagtgcgacacacag
cttcttcaagatgcagccaggaaagaagcagcacagagtaaacagtag
DBGET
integrated database retrieval system
