Acanthaster planci (crown-of-thorns starfish): 110978458
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Entry
110978458 CDS
T05078
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110978458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110978458
03012 Translation factors [BR:
aplc03012
]
110978458
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110978458
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110978458
Translation factors [BR:
aplc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110978458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
ATPase
ABC_tran
Cas3-like_C_2
Tyr-DNA_phospho
NACHT
NPHP3_N
Myosin_head
TsaE
Motif
Other DBs
NCBI-GeneID:
110978458
NCBI-ProteinID:
XP_022089171
UniProt:
A0A8B7YBV4
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MIASARFTFCGGLRNGRRSFSPLDRIKLTFDQMSKARGRYFNSHRGRDRGARWDGGQEDG
RAGPSSRDGEEGGSGWGQGHGGGGKMGGPPPGLRGRQIGMWYAARGRAKKAAEEARNRPV
IGMQPEHERHICKLLDDVRNQGSDDEEQLENMEVTPRKNPQEEQFHSFYSHVLTRDAGLD
DRLRLELETKLANNRQYRDMQEFRKKLPSYNMRHELLRLISENQVVVISGETGCGKTTQV
PQFILDHHIQQGQGSTCRVICTQPRRISAISVAERVACERGEACGNGNSTGYQIRLEARF
PRQQGCILYCTNGILLKWLESDRLLQSVSHVVLDEVHERDIISDFLLVILKDILPKRPTL
KLILMSATLNAELFSAYFHGCPMANIPGFTFPVLEYWLEDVLQMTKYHPPEQRRRHEPVW
LKFRRGKRYREDELKKEEEFKERFSNYIVEMRQTYPEEVVYHLENMDHENMDLEMVSSVI
RYICLNKPEGALLVFLPGWEQISKVNDLLTQQQMFRNNNFRIIPLHSMMPTVNQRQVFER
PPPGVRKIVIATNIAETSITIDDVVYVINLGRVKERNFDVENNLSTLKPEWISVASARQR
RGRAGRVQPGECYHLYNQLKAAMLADYQLPEMLRTPLDELCLQIKSLKLGSVHGFIEKAL
QQPDPGAVDLALESLTRMNALDENEELTPLGYHLARLPVSPTIGRMILFGAMFCCLDPIL
TIAASLSFKDPFVIPLGKEEMADAQRKRISEDTFSDHLMLVNAVAGWEEARDRGRQAESD
YCWRNFMSITTLKMLDNMKTQFCELLASIGFVAGKSCKQRAANRNSDNRQLVKAILCSGL
YPNVAQVKKNSFNRREGRLRPAKIMTPQDGRVKIHPKSVNSDEAHFPTNWILYHLKLKST
NVFLHDTSAVEPYPLLFFGGKIGVTREEGLEMITVDDHIKFSAPARIAYLVKDLRCELDK
LLQQKISQPGMTCWRQDTKEGRIMQAIIDLITTQEDSRQSAW
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaagtgcacgttttactttctgcggaggtctccgaaacggacgcagatcattt
tcccctctagatagaattaagctgactttcgatcaaatgagcaaggccaggggacgctac
ttcaacagccacagaggccgagaccggggcgccagatgggatggaggccaggaagacggg
cgagcgggacccagcagcagagatggagaagaaggagggagtgggtggggacaaggccac
ggtggagggggtaaaatgggcggaccaccaccggggctgaggggacgacagatcggcatg
tggtatgctgcacgcgggagggcaaagaaagcggccgaagaagccagaaataggcccgtc
ataggtatgcagcccgagcatgagcggcacatctgcaagttgttggacgatgtgagaaac
cagggatctgatgacgaagaacaactcgaaaacatggaagttacccccaggaaaaatccg
caagaggagcagttccactcattctacagccacgtgctaacccgagatgctggcctggac
gatagactacggctggagctggagactaagttggccaacaaccggcaatacagagacatg
caggagttccgcaagaagctgccatcctacaatatgagacatgagcttctgcgtttgatc
agcgagaaccaggtggtggtcatcagcggggagacaggctgcggcaagaccacccaggtg
ccccagtttatcctagaccaccatatccagcaaggtcaggggtcgacctgccgcgtcatc
tgtactcagccccgtagaatctcagccatatcggtggctgagagggtggcgtgtgagaga
ggtgaggcatgcggcaatggcaacagcacggggtaccagattagattggaggcacggttc
ccacggcaacagggctgcatcctctactgcaccaatggtatcttgctgaagtggctggaa
tcagaccgacttctgcaaagcgtaagccacgttgttctggacgaggttcatgagagagac
atcatctctgacttcctgctggtcattctcaaggatattcttcccaaaagaccgacgctc
aagttaatcctgatgagtgcgaccctcaatgccgaactgttctcagcctacttccacggt
tgcccgatggccaacattcctggtttcaccttccccgtcctggagtactggctggaggac
gttcttcagatgaccaagtatcatcctcctgagcagcgtaggagacacgagccggtgtgg
ctaaagtttcgacgtgggaagcgctaccgggaggatgagctgaagaaagaggaggaattc
aaggagaggttcagcaactacatcgtcgaaatgcgacaaacatatcctgaagaggtggtg
tatcatctcgaaaacatggaccatgagaatatggatctggagatggtttcttctgtcatt
cgttacatctgcctcaacaaaccggagggcgcccttctggtcttcctcccaggctgggag
cagatctccaaagtgaacgacctcctgacccagcagcagatgttccggaacaacaacttc
cgcatcattcccctgcactccatgatgcccacagtcaaccaaagacaggtatttgagcga
cccccgccgggcgtccgcaagatcgtcatagcaaccaacattgccgagacgagcataacc
attgacgacgtggtgtacgtcatcaacctgggccgcgtcaaggagcggaactttgacgtg
gaaaacaacctcagcaccttgaagccggagtggatcagtgtagcatcagcccgtcagaga
agggggagagctggcagagtgcaacccggggagtgctatcatctatacaaccagcttaag
gcggccatgctggcagactaccagctgccggagatgctgcggacgccactggacgaactc
tgcctgcaaatcaagtcactgaagcttggtagtgtccacggcttcattgagaaggcccta
cagcagcctgaccctggggcagtggacctggcattggaaagcctaacacggatgaatgct
ttggatgagaatgaggaactcaccccgctgggttaccaccttgcccggctccctgtctcc
ccgacaatcggccgcatgattctcttcggtgccatgttctgctgcctggaccccatccta
accatcgctgccagccttagcttcaaggatccctttgtcattccactgggcaaggaggag
atggccgacgcccagcgtaagcgcatttcggaggacacgttcagcgaccacctcatgctg
gtcaatgccgtggctggctgggaagaggccagagaccgcggacgacaggccgagagtgat
tactgctggaggaacttcatgtccatcaccactctcaagatgctggacaacatgaagacc
cagttctgtgagctgctggcatccataggcttcgtggctgggaaatcctgcaaacagagg
gcagctaacaggaactcagacaacaggcagctagtcaaggctatactgtgttcaggtctg
tatccgaatgtggcccaggtgaagaagaactcattcaacaggcgagaaggaagactaagg
ccagctaagattatgactccccaagatgggcgggtcaagatccatcccaagtcggtgaac
tccgacgaggctcacttccccaccaactggatcctctaccatctcaagctgaaatccacc
aacgtgtttctccacgacaccagtgccgtggaaccctaccctctgctgttctttggcggg
aagattggtgtcactcgagaggaagggctggagatgatcaccgtcgacgatcacatcaaa
ttctctgccccggccagaatagcctatttagtcaaggatctccggtgtgaactggacaag
ctcctgcaacagaagatcagccaaccagggatgacctgctggcgtcaagacaccaaggag
ggccggatcatgcaggccatcatcgacctcatcacaacccaggaggacagcagacagtct
gcctggtag
DBGET
integrated database retrieval system
