Acanthaster planci (crown-of-thorns starfish): 110978487
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Entry
110978487 CDS
T05078
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110978487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110978487
03012 Translation factors [BR:
aplc03012
]
110978487
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110978487
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110978487
Translation factors [BR:
aplc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110978487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
ATPase
ATPase_2
Tyr-DNA_phospho
Cas3-like_C_2
NACHT
ABC_tran
NPHP3_N
TsaE
Myosin_head
NB-ARC
PhoH
AAA_23
Motif
Other DBs
NCBI-GeneID:
110978487
NCBI-ProteinID:
XP_022089221
UniProt:
A0A8B7YA46
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MYAARRRAEEAAEEARNRPVILGMRPQHVRDICKLLGDLREQGSDDEEQLEDLQVTQRRN
PQEEQFHSFYNHMLAQDTDLDDRLQLELETKQTDNWQYRNMQEFRKKLPSHSMRQELLRL
ISENQVVVISGETGCGKTTQVPQFILDHHIQQGQGSTCRVICTQPRRISAISVAERVACE
RGEACGSGNSTGYQIRLEAQFPRQQGCILYCTNGILLKWLESDQLLQSVSHVVLDEVHER
DIISDFLLVILKDILPKRPTLKLILMSATLNAELFSTYFDGCPMANIPGFTFPVEEYWLE
DVLQMTKYTPPEQHRKHEPIWLKFGFGKRFREELKKEEEFKERFSGYIAKMRQKYPEEVV
YHLKNMDHENMDLEMVSSVIRYICLNKPEGALLVFLPGWEQISKVNDLLTQQQMFQNDNF
RIIPLHSMIPTINQRQVFEQPPPGVRKIVIATNIAETSITIDDVVYVINLGRIKERNFDV
ENNLSTLKPEWISAASASQRRGRAGRVQPGECYHLYSQLKAAMLADYQLPEMLRTPLDEL
CLQIKSLKLGSIHGFIEKALQQPDPRAVDLALESLTQMNALNENEELTPLGYHLAWLPVS
PAIGRMILFGAMFCCLDPILTIAASLSFKDPFVIPLGKEETVNAQRKQLSGDTFSDHLML
VNAVAGWEEARNSGRHAESDYCWSNFMSITTLKMLGNMKTQFCELLASIGFVAGKSCKQE
EANKNSDNKQLVKAILCSGLYPNVARVTKGSFNMKEGKYRPAKIMTRQDGQVKIHPKSVN
FKEADFPTNWILYHLKLKSTNVYLHDTSAVGPYPLLFFGGKIGVTRKEGSEMITVDDHIK
FFAPARIAYLVKELRFELDKLLQQKISQPGMTCWRQDTKEGRIMMAIIDLITTQEDSRQ
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcggcacgcaggagagcagaggaagcggctgaagaagccagaaataggcccgtc
atactaggtatgcggccccagcatgtgcgggacatctgcaagttgctgggagatttgaga
gagcaaggatccgatgatgaagagcaactcgaagacttgcaagttactcaaaggagaaat
ccgcaagaggagcagttccactcattctacaaccacatgctggcccaagacaccgacctg
gatgatagactgcaactggagctggagactaagcagaccgacaactggcaataccgaaac
atgcaggagttccgcaagaagcttccgtcgcatagtatgagacaggagcttctgcgtttg
atcagcgagaaccaggtggtggtcatcagcggagagacaggctgcggcaagaccacccag
gtgccccagtttatcctagaccaccatatccagcaaggtcaggggtcgacctgccgcgtc
atctgtactcagccccgtagaatctcagccatatcggtggctgagagggtggcatgtgag
agaggcgaggcgtgtggcagtggcaacagcacggggtaccagattagattggaggcacaa
ttcccacggcaacagggctgcatcctctactgcaccaatggtatcttgctgaagtggctg
gaatcagaccaacttctgcaaagcgtaagccacgttgttctggacgaggttcatgagaga
gacatcatctctgacttcctgctggtcattctcaaggatattcttcccaaaagaccgaca
ctcaagttaatcttgatgagtgcgaccctcaatgctgaactattttcgacctactttgac
ggttgcccgatggccaacattcctggtttcaccttccccgtggaggagtactggctggag
gacgttcttcagatgaccaaatacactcctccagagcagcacaggaaacacgagccaatc
tggctgaagtttggattcggaaagcgcttccgggaggagctgaagaaagaggaagaattc
aaggagaggttcagcggttacattgccaaaatgcgacaaaaatatcctgaagaggtggtg
tatcatctcaagaacatggaccatgagaacatggatctggagatggtttcttctgtcatt
cgttacatctgccttaacaaaccggagggcgctcttctggttttcctcccaggctgggag
cagatctccaaagtgaatgacctcctgacccagcaacagatgttccagaacgacaacttc
cgcatcattcccctgcactccatgatacccacaatcaaccaaagacaggtatttgagcag
cccccgccaggtgtccgcaagattgtcatagctaccaacatagccgagacgagcatcacc
attgatgacgtggtgtacgtcatcaacctgggccgcatcaaggagcggaactttgacgtg
gaaaacaacctcagcaccttgaagccggagtggatcagtgcagcatcggccagccagaga
agggggagggctggcagagtgcaacctggcgaatgctatcatctatatagccagctgaag
gcagccatgctggcagactaccagctgccagagatgctgcggacgccactggacgaactc
tgcctgcaaatcaagtcactgaagctcggcagcatccacggcttcatcgagaaggcccta
cagcagcctgaccccagggcagtggacctggcattggaaagcctcacacagatgaatgca
ctaaatgagaacgaggaactcaccccgctgggttaccaccttgcctggctccctgtctcc
ccggccatcggccgcatgattctctttggtgccatgttctgctgcctggaccccatcctg
accattgccgccagccttagcttcaaggatccctttgtcattccgctgggcaaggaggag
acggtgaatgcccagcgcaagcagctctcaggggacacgttcagcgaccacctcatgctg
gtcaatgctgtggcaggctgggaagaggcccgaaacagtggacgacatgctgagagcgat
tactgctggagtaacttcatgtctattaccaccctcaagatgctgggcaacatgaagacc
cagttctgtgagctgctggcatccataggcttcgtagctgggaaatcctgcaaacaggag
gaagccaacaagaactcagacaacaagcagctggtcaaggctatactttgttcaggtctc
tatccaaatgtggcccgtgtaacgaagggctcattcaacatgaaagaaggaaaatacagg
ccagctaagattatgactcgccaggatgggcaggtcaagatccatcccaagtcggtcaac
ttcaaggaggctgacttccccaccaactggatcctctaccatctcaagctgaaatccacc
aacgtgtatctccatgacaccagtgccgtggggccctaccctctcctgttctttggcggg
aagatcggtgtcacccgaaaggaagggtcggaaatgatcaccgtcgacgatcacatcaaa
ttcttcgccccagccagaatagcctatttagtcaaggaactccggtttgaactggacaag
ctgctgcaacagaagatcagccaaccagggatgacctgctggcgtcaagacaccaaggag
ggccggatcatgatggccatcatcgacctcatcacgacccaggaggacagcagacagtag
DBGET
integrated database retrieval system
