Acanthaster planci (crown-of-thorns starfish): 110978528
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Entry
110978528 CDS
T05078
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110978528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110978528
Spliceosome [BR:
aplc03041
]
Complex B
Other components
Prp19-related factors
110978528
Complex C
110978528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
RRM_3
RRM_YTH1
zf-CCCH_4
zf-CCCH
RRM_PARP14_3
TetR_C_21
zf-CCCH_10
zf-CCCH_PARP12
RRM_7
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
110978528
NCBI-ProteinID:
XP_022089325
UniProt:
A0A8B7YAC7
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MAASKSTNTYNRQNWEEADFPILCQTCLGDNPYIRMTKEKFGRECKICDRPFTIFRWCPG
ARMRFKKTEICQTCSKIKNVCQTCLLDLEYGLPIQVRDAALNIKDEMPKSEVNKEYYSQN
IERQIANIDGVQAAGAVGKAQAPSDLLMKLARTTPYYKRNRPHICSFWVKGECRRGEECP
YRHERPTDPDDPLADQNIKDRFYGTNDPVAEKLMRRADTMPKLEPPDDKTVTTLYVGGLG
DKVTEENLRNHFYQFGEIRSINVVQKQQCAFVTFTTRTAAEQAAEKSFQKLILKGRRLNV
KWGKSQGQQGVAVKNIEGGKEPQYEPVPGLPGALPMPPMPADGSQPSNFFNLDQDDSQLP
PLPGGPVGPMGPLGGPPGRLTRGPPPRMMHHQQPPPPGAFDFPPPGFPALPGYRGPPPFH
PGARPPPPGVRPPPPGVRPPPPGIRPPMGLPPPGQAVHYPSQDPQRMGTGTTQE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagcaaaagcacgaacacgtacaatcgtcaaaattgggaggaagcagacttc
ccgattctatgccagacatgcctaggagataacccctacattcgcatgaccaaagaaaag
tttggccgtgaatgcaagatttgtgatcgacctttcaccatcttccgctggtgtcctggt
gctcgtatgcgattcaagaagacagaaatttgccagacatgcagtaagatcaagaatgtc
tgccaaacatgtttactggatcttgaatatggacttcccattcaagtcagagatgctgca
ttgaacatcaaagatgaaatgcctaagtcagaagtaaacaaggagtactactcacagaat
atcgagagacagattgccaatattgacggggtgcaagcagcgggtgcagttggcaaggca
caagcccctagtgatcttctcatgaagctggctagaactactccctactacaaacgcaac
agaccccacatctgttctttctgggtcaaaggtgaatgccgacgaggagaagagtgtcca
tacagacatgagagaccaacagatccagatgatccactagcagatcagaacatcaaagat
cgtttctatggcacaaatgatcctgttgctgagaagttaatgcggcgcgctgataccatg
cccaagctagaacctcctgatgacaagacggtgactacactttatgtgggtggcctaggg
gataaagtcacagaagaaaatctaaggaatcacttttatcagtttggagagattcggtct
attaatgttgtccagaagcagcagtgcgcctttgtaacattcacaactcgcactgctgct
gaacaggctgctgaaaaatccttccagaaactgattctgaaaggtcggaggttaaatgtc
aagtgggggaagtcccaaggtcagcaaggtgttgctgtcaagaacatagaagggggcaaa
gagccacagtatgaaccagtgcctggattaccaggggctctgccaatgccacccatgcca
gctgacggatcacaaccaagtaatttcttcaatcttgaccaggatgattcccagctaccc
ccattgccaggaggccctgtaggacccatgggtcccctagggggtccccctgggagatta
acaaggggtccaccacctcgtatgatgcatcatcaacagccaccaccaccaggagctttt
gatttccctcccccaggcttccctgcactacctggttaccgtggtccacctccattccat
cctggagcgcgtcccccacctccaggggtaaggccaccacccccgggggtcagacctcct
ccccctgggatcagaccaccaatgggactgcctccccctgggcaagctgttcattaccca
tcacaagaccctcagcggatgggcacaggaaccacccaagagtag
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