Acanthaster planci (crown-of-thorns starfish): 110979172
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Entry
110979172 CDS
T05078
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110979172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110979172
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
110979172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
110979172
NCBI-ProteinID:
XP_022090438
UniProt:
A0A8B7YB40
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MATTSNTDDQEAVEFVPESDELFPGVKDVATFSQQTLGRLMLATKAAHALPPHGDDYDFY
SSYETFRQYCHSQSERLLQNINGLMHLQGSKAHLTGGSSAPELEDKTDAIIETNDTILEK
VGLLLDEATGLIKPGKAALPPGSQPKAPPKLIVASWNQQSSTESQKGRSFHLMHAKNISR
PQLKFKDKINNSNTPFVPIITSKPNALKPLNKGLLSPSKSKSEGKDIPDAVSAFIHQQRV
GTDESEDITAHPYQYELDHFVPDPSMLLPVDSPSYEPLDTTPLTLVDTVEQLEELSRTLD
SLNEFAVDLEHHSYRSFQGFTCLMQISTGRHDYIIDTLALRSELQILNNSFTNPAIVKVF
HGADMDVEWLQRDLGLYVVNMFDTGQASRILGKARNSLAHLLQLYCGLSPDKSYQLADWR
IRPLPQEMISYSRADTHYLLYIYHRMKNELIERGNKANNLLKQTLEQSRQVCLRRYKKLI
FTDDSYLTLWKRSKKSFNPKQYEALKLLYAWRDRVGRQEDESTGYVLPNHMLFQVAENLP
REPHGVLACCNPIPPLVRQQLNEVHQLVLKARMYQGRIKKPSPSPKIFASPSSPMETPTP
IKLTPRPLNSLLSCPHDPTPQQEVPDQNNMVRSVPVAHYSALFGEEALPEVHPGTVRSAS
PIITAFGSSSDEETDRAQPTPGQQKVARLKSMFVNPFEMFLPPKRLVQITPALLEADKIN
LLPAGSKSGAPSSGSSTEVPLDTALSVWKLKKPPKPPPAPAKTETAALQNANNNRESESD
TEGEATEETAGKETGGTLRQQKRKAPPVDDPPVMTYRPPAKREKKSDNRKANPHTKRVVD
PGTFKPFDYSAVSVPPANDGRQPSSGRGSGWGNRGSGWGNQGRGRGDRGRGVAKHFDPFT
HASTRDRPEFKNKGRPKAPRGSGQHSVTYTKHDGGRNFRGKHHWPKR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccagtaacacggatgatcaagaagctgtcgaatttgtcccggaaagtgac
gaattgtttccaggtgttaaagatgtagccactttctcccagcaaaccctaggtcgactg
atgttagcaacgaaggctgcacatgccctccctccgcacggcgatgactatgacttctac
tccagctacgagacttttcgccagtactgccacagccagtctgaaagacttctgcagaac
atcaacggcctcatgcatctccaaggcagtaaagcacatctgacaggggggagctctgcc
cctgagcttgaagacaagacggatgcaatcatcgagacaaatgacaccattcttgagaaa
gtgggcctactcctggatgaagccaccggactgatcaagccaggcaaggcagctctcccc
ccaggctcccagcccaaggctcctcccaagctcatagtggccagctggaaccaacagagt
tctacagagtcacaaaagggtcgatcgtttcacctcatgcatgccaagaacatttcccga
ccgcagctgaagttcaaggataagatcaacaacagcaacacaccgtttgtcccaatcatc
accagcaagccaaacgccttgaaaccgctcaataaagggttattgtctccaagcaaaagc
aagtcagaaggcaaagacattcccgatgcagtctcagccttcatccatcagcagcgagtg
ggaactgatgaaagtgaagacattacggcccacccctaccagtatgagctggaccacttc
gttcccgacccctccatgcttctccccgtggactcgccctcttacgaaccccttgacaca
accccgctcacgctggtggacacagtggagcagttggaggaactcagtcggacgctggac
tcgctgaatgaatttgccgttgatttagagcaccactcctaccggtcattccagggtttc
acctgcctcatgcagatctcgacgggtcgccatgactacatcattgacacactggctctc
agaagtgaactgcaaatccttaacaactccttcaccaacccagcgattgtcaaggtcttc
cacggggctgacatggatgtggaatggctgcagcgggacctcggcctctacgtggtcaac
atgtttgacaccggccaggcctctcgcatcctcggcaaggcccgaaactccctcgctcac
ctgctccaactctactgcggcctgtcccctgacaaatcctaccagcttgctgattggagg
ataagacctctgccccaggagatgatcagctacagccgtgccgacacccactacttgctg
tacatatatcaccgtatgaagaacgagctgatcgagagaggtaacaaggccaacaacctg
ctgaagcagaccctcgagcaaagcagacaggtctgcctccggcgctacaagaagctcatt
ttcacagacgattcctacctaactctgtggaaacgcagcaagaagtccttcaatccaaaa
cagtacgaggcacttaagctgctgtatgcttggagggaccgggtaggaagacaggaagac
gaaagcacaggctacgtcctaccaaatcacatgctcttccaagttgccgagaatcttcca
agggagccccatggagtgttggcctgctgtaatcccatccccccgttggtgcgacaacaa
ctgaacgaggtccatcagctggtcctaaaagccaggatgtaccaaggccgcatcaagaaa
ccgagcccaagtcccaagatatttgcctccccatcgtcaccaatggagacccctacccca
atcaaactgacccctagaccactaaacagtctcctgtcctgtcctcatgaccctacacca
cagcaagaagtcccagaccaaaataacatggttcgctccgttccagttgctcattactct
gctctgtttggggaagaagccctccctgaagtccaccctgggactgtacggagcgccagc
cccattatcacagccttcggcagtagctcagacgaggagactgacagagcccagccgacg
ccaggacaacagaaagtggcacggctcaagtccatgttcgtcaacccatttgaaatgttt
cttcctccgaagcgcttggtccagataacccccgccctcctagaagctgacaaaattaac
ctcttgcctgctggaagtaagagtggcgctccctcaagtggctcatcgactgaggtacct
cttgatacagctctgagcgtgtggaagctgaagaaacctcccaagccaccaccagcacca
gcgaagacagagaccgccgctctccagaacgccaacaataacagagagagtgagagcgac
acagagggtgaggcaacggaggagacagccggaaaagaaacaggaggcacattgagacaa
cagaaacgaaaggctcctccagtggacgacccaccagtgatgacttatcgaccgccggcc
aaacgggagaagaagtcggacaatcgcaaggcaaacccccacacaaagagagtggttgac
ccagggacattcaagccattcgactacagcgctgtcagtgtgccgccagcaaatgatggc
agacagcctagcagtggcagaggaagtgggtggggcaaccgaggaagtgggtggggcaac
caaggaagagggcgaggtgatcgaggaaggggcgtggccaagcattttgatcctttcact
cacgcatcaacacgcgaccgtcccgaatttaagaacaaggggcgaccaaaggcgcctcgt
ggctctggacaacacagtgtaacgtacacaaagcacgacggaggaaggaatttccgaggc
aaacaccactggccaaagagatag
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