Acanthaster planci (crown-of-thorns starfish): 110979521
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Entry
110979521 CDS
T05078
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110979521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110979521
Spliceosome [BR:
aplc03041
]
Complex A
Other components
Complex A specific factors
110979521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
KH_12
zf-CCHC
zf-CCHC_5
DUF7573
Rhodanese_C
DnaJ_CXXCXGXG
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
110979521
NCBI-ProteinID:
XP_022091067
UniProt:
A0A8B7YEQ8
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MAGTGANSIPLGTLHPILRGQKAPGMAGGGLTGPIGGGGESSMLNAAREAAARVTANIMG
KRPAPAGPSPSGPGGPGKSIDSTNWPPDKKRKRSRWGGEETKPTGVASIIPSGLSKDQEK
QVLLHLQVEEISRQLRSGDLGIPPPEDRSPSPEPVYNHEGKRLNTREYRTRKKLEEQRHI
LIQEAMLLNPDYKPPADYKPPVQRVSDRVMIPQDDHPDINFVGLLIGPRGNTLKKLEKDT
GTKVMIRGKGSVKEGKVGRKDGQPLPGEDEPLHALVTANTSEAVKKAVDQIREIIKQGIE
TPEGQNDLRRMQLRELARLNGTLRDEDTTRCSNCGALTHRTWQCPEKQNITSTIVCSLCG
GTGHLAQDCRAKLDGSGMGGPMGGGGGPLGGPNGAPPRMAGPSAAEKAKMDSEYMSLMAE
LGEGPPPLEPKMNMPPPPHSQQGPPNMGGPRPLLSTPPNQHNQNHQNHPRPLMGQNFQPH
WMNKDHHGPPGQNKPPSLLGIPPPHHHRGPPGGGGGPPGPPGHPSGPPPPNFGGPPPPGG
PPGQFGMNPPPPGLLPPPGMMQPPPGMMNMPPHGMGGGNPPPWGMPPPPPASQQQTATST
IPTSATAMPTLAGMQALAMPVPPPPTSLLAAPPPPPPSSDPPPPPQPTSAAPWQVQTSAG
GRPVVSTTGLATSPPWQRLAQEGGLSVGVSVANLPWHQPTAPTTTASAVSAAAWQQLLQQ
QQHSTAATATGLYGDYPSNWLSGITDCAASAPAVGSGSTPTPDAVSAPDGCTPTVGPLAH
VSASHATGSPTPVTRTDGLQSAPTPTVSDASSPRSATPTSAPFLTGMCRKWQQGLRSHFG
NPSTNFDCKSLFVY
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaacaggggcgaatagtatacctctgggtaccctgcatcccattttacggggt
caaaaggcacctggcatggctggaggtggtttaacgggcccgataggcggcggcggtgag
agctccatgttgaatgctgcgagagaagctgctgctagagtcacggcgaatatcatgggg
aagcgcccagcgccagcagggccgtcacccagtgggcctgggggccctggaaagtccata
gattccaccaactggcctcccgacaagaaacggaaaagaagtcgttggggcggggaggaa
actaagccaactggtgtggcgtccatcattccttctgggctcagcaaagaccaggaaaag
caggttttgttgcacttgcaggttgaagagatcagccgtcagctccgttctggagatctg
ggaatcccgcctcccgaggataggtcaccgtcgccagagcctgtctacaatcatgagggg
aagcgcctcaacacgcgggaataccgaacccgcaagaagctggaggaacaacgccatatt
ctcatccaggaggctatgctgctcaacccggactataagccgcctgcagattacaagccg
ccagttcaacgtgtgagtgatcgagtcatgatcccgcaggatgaccacccagacatcaac
tttgttggacttttaatcgggccacgtggaaacactctgaagaaactggaaaaagataca
ggaaccaaggtcatgatcaggggcaaagggtcggtcaaggagggcaaagtgggccgcaaa
gatggtcagccccttcctggcgaagatgaacccctccacgccctggtaacggccaacacc
tcagaagccgtcaagaaagctgtcgaccagatccgtgagattatcaagcagggaattgag
acgcccgaggggcagaatgatctgagaaggatgcagctgcgtgagctcgctcgtctcaac
ggtacactgcgagacgaggacaccacaagatgttccaattgcggcgccctcacacatcgt
acctggcagtgccccgagaaacagaacatcaccagtaccatcgtctgttccctgtgtggt
ggcacgggccaccttgcgcaggactgccgtgccaagctggacggtagtgggatgggcggt
cccatgggtggtgggggtggacccttgggtgggcccaatggtgccccaccccggatggca
ggccctagtgcagccgagaaggccaagatggactcggagtatatgtccctcatggcagag
ctcggtgaaggaccacccccgttggagcccaagatgaacatgcctccgccccctcacagc
cagcaaggcccgcccaacatgggtggacccaggccacttctgtccaccccgcccaaccag
cataaccagaatcatcagaatcatccccgcccgctgatggggcagaattttcagccccat
tggatgaacaaggaccaccatggaccccctggtcagaacaagcccccgagtctcctgggc
atccctcctccccaccaccaccgtgggcccccaggaggcggaggtggtcccccgggacca
cctggccatccctcaggccctccacctcccaattttggtggcccgcctccccctggtgga
ccccccggccagtttggtatgaatccgcctcccccgggactattacccccgccaggcatg
atgcagccccctccaggcatgatgaatatgccgccccacggcatggggggtgggaacccg
cccccatgggggatgcctccaccgccaccggcctcacagcagcagacagcaacaagtacc
attcccacatctgcaacagctatgccgacactggctggcatgcaagcactggccatgccc
gtacctcctccacccacgtcactcctggccgcacccccgcctccacctccgagcagtgat
ccaccccctccaccacagcccacatcagccgccccatggcaagtccaaacaagtgcaggc
gggagaccggtggtctcaactaccggcctggcgacctcgccaccatggcagcgccttgct
caagagggagggctgtcagttggcgtatcagtggcaaatctgccatggcatcagcccaca
gctccgacaaccacagccagcgccgtgagtgcagcagcttggcaacagctcctgcaacag
caacaacacagcacagcagcaacagccacaggtctctacggtgactacccaagcaactgg
ctctcaggcatcactgactgtgccgcctccgcccctgcagtgggcagcggttccaccccc
acccccgatgcagtctccgcccccgatggctgcacccccacagtcggcccccttgcccac
gtttcagcctcccatgccacagggtcccccacccccgttacccggacagatggccttcag
tcagcccccacccccactgtctcagatgcctccagccctcggtcagccacccccacctcc
gcccccttcttaactggaatgtgcagaaaatggcagcagggtcttcgatcacattttggg
aacccaagtacgaattttgattgtaaaagtctgtttgtatactaa
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