Acanthaster planci (crown-of-thorns starfish): 110979844
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Entry
110979844 CDS
T05078
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03020
RNA polymerase
aplc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110979844
09124 Replication and repair
03420 Nucleotide excision repair
110979844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aplc03021
]
110979844
03400 DNA repair and recombination proteins [BR:
aplc03400
]
110979844
Enzymes [BR:
aplc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110979844
Transcription machinery [BR:
aplc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110979844
DNA repair and recombination proteins [BR:
aplc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110979844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
110979844
NCBI-ProteinID:
XP_022091645
UniProt:
A0A8B7YGX2
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MYGQDDEPYEEDDSDEITQDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPAVDLQAEAQHTSTEMEIPTRYLLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLTY
SAPLYVDIMKTVIQDGEETSETQHLKTFIGKIPIMLRSTYCLLSGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNSVYVFCKKDTKYAFTAECRSCLENSSRPTSTIWVHLM
AKGGQGSRKSAIGQRIAAILPYIRLEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEI
VKPSLDEAFVIQEQSVALNFIGARGAKPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYCVHRLLLAALGRREVDDRDHYGNKRLDLAGPLLAFLFRNLFKNLLKEVRMYAQ
KFIDKGKDFSMELAIKTRIISDGLKYSLATGNWGDQKKAHAARAGVSQVLNRLTFVSTLS
HLRRLNSPVGRDGKLARPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAINEATKIFVNGCWVGIHREPEQLMNTLRKLRRQMDIIVSE
VSMVRDIREREIRIYTDAGRICRPLLIVENQKLLLKRKHIDMLKEREYNNYSWQDLVASG
VVEYIDTNEEETIMLAMTPDDLHEKDVMYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNYHVRMDTLAHVLYYPQKPLTTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVILNSGAVDRGFFRSVFYRSYKDSESKKMDQEEIFEKPNREFCRGMR
TAVYEKLEDDGIIPPGTRVSGDDVLIGKTITEPEDDDELEGTSRRYTKRDCSTFMRRSET
GIIDQVMISINQEGYKFCKIKVRSVRIPQIGDKFASRHGQKGTCGMKYRPEDMPFTCEGI
NPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDSVNVQKISDLLHEYGYH
QRGNEVLYCGFTGRKIGVQVFLGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSRD
GGLRFGEMERDCQISHGSAQFLRERLFEVSDPYRVHVCNLCGLIAIANLRNNTFECRGCK
NKTQISQIRLPYACKLLFQELMAMSIAPRMMVMPEGKA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtatggccaagatgatgaaccgtatgaagaggatgattcggatgagatcacgcaggat
ctctggcaagaagcctgctggattgtcatcagctcctacttcgatgagaagggtctggtc
cgacaacagctcgactcgtttgatgagttcatccagatgtctgtccagcgaatcgtggag
gatgccccagccgttgacctacaggcagaggctcaacacacatccacagagatggagatt
cctacgcgttacttgttgaagtttgagcagatctatctctccaagcccacacattgggag
aaggatggctcaccaagtccaatgatgcccaatgaagctcgactccgtaatctcacttac
tcagccccactgtatgtagacatcatgaagacagtgatccaagatggtgaagagacatca
gagactcagcatcttaagacattcattggcaagattcccatcatgcttcgctccacgtat
tgcttgcttagcggcctgactgatcgtgatcttacagagttgaatgagtgtcccttggat
cctggtggctacttcatcatcaatggctcagagaaggtgctgattgctcaagagaagatg
gcgactaactcggtctacgtcttctgcaagaaagacacaaagtatgccttcactgctgag
tgtcggtcctgcttggagaactcctctcgtcctactagtactatctgggtgcatcttatg
gccaaaggagggcagggctccaggaagagtgccattggtcagcgcattgcagccattttg
ccctatattcgcctggagattcccatcatgattgtcttcagagccctagggtttgtcgcc
gacagggacatcctagaacacatcatctatgactttgacgatcctgagatgatggagata
gtgaaaccttccttggatgaggcgtttgtcatccaggaacagagtgtcgcattgaatttc
attggtgctcgtggagcaaagccaggtgtcaccaaggagaagagaatcaaatatgcacgg
gagatcctacagaaagagatgttgccacatgtaggcgtcagtgatttctgtgaaacaaag
aaggcttacttccttgggtactgtgttcacagacttctccttgcggcgttgggtcgcaga
gaagtggatgatcgtgatcactatggcaacaaacggttggatctagctggacccttactg
gccttcctcttcagaaacctcttcaagaatctgttgaaggaggttcggatgtacgctcag
aagttcatcgataagggcaaggatttcagtatggagttagccatcaagaccagaatcatc
tctgatggcttaaagtattcactagccacagggaactggggtgaccagaagaaagctcat
gctgccagggctggggtctctcaggtattgaacagactgacattcgtgtccacgttgtcc
catcttcgtagactcaactcccctgtgggcagggacggcaaactggccagacctcgtcag
ttacacaacacactgtggggcatgatctgccccgctgaaacaccagagggtcacgctgtg
ggtcttgtcaagaatcttgctctgatggcatacatctcagtaggttcccaacctagtccc
atcctggagtttcttgaggaatggagtatggagaacctggaagagattgccccatcagcc
atcaacgaagcgaccaagatctttgtgaatggctgctgggtaggcattcatcgtgagcct
gagcagctcatgaacaccttacgcaaactacgtcgtcaaatggacatcatcgtctccgag
gtgtccatggtacgtgacattcgggagagagagatccgaatctacacggatgccggccgc
atctgtcggccattgctcatcgtggagaaccagaaacttctactgaagagaaaacacatt
gacatgttgaaagaacgggagtacaataactacagttggcaggaccttgttgccagcggt
gttgtagagtatatcgacaccaatgaggaagagaccatcatgttggcaatgacccctgat
gaccttcacgagaaggatgtcatgtactgctctacatacacccactgtgagattcatccg
tccatgatcctgggtgtctgtgcatccatcattccttttcctgatcacaaccagtcaccc
cgtaacacctaccagtcagctatgggtaagcaagctatgggcgtctacatcaccaactat
cacgttcgcatggatacccttgcccacgtgctgtactacccccagaaacctctgaccacc
acacggtccatggagtacctccgattcagagagctgcctgctggtattaattccatcgtg
gctattgcctcctacacgggctacaaccaggaagattctgtcatcttgaactcaggagct
gtcgatagaggcttcttcaggtcagtcttctaccggtcatacaaggactcagagtccaag
aagatggaccaggaagagatttttgagaagccaaatcgagaattttgccgagggatgcga
acagcggtctatgaaaagttggaggacgatggcatcattcctcctggcactcgtgtgtct
ggagatgatgtcctcatcggcaaaacaataacagaacctgaggatgatgatgagctggag
ggtaccagtcgacggtataccaagcgagactgtagcacattcatgcgacgctcagagact
ggtatcattgatcaggtcatgattagcatcaaccaggaaggctacaagttttgtaagatc
aaggttcggtcggtgcgtattccccagatcggcgacaagtttgccagcagacatgggcag
aagggtacttgtggaatgaagtacagaccagaggacatgccatttacctgtgagggcatc
aatccagacatcatcatcaaccctcacgccatccctagccgtatgaccatcggtcacttg
attgaatgcctccagggtaaagtatcggccaacaagggggagattggtgatgcaacgccg
ttcaacgactcagtcaacgtacagaagatctcggatctgctgcatgagtatggataccat
cagagaggcaatgaggtgctttattgtggtttcactggccgcaagattggtgttcaggta
ttcctgggtccaacctactaccaacgtctcaagcatatggtagatgacaagattcactcc
agagctcgtggacctgtgcagatcttgaacagacagcccatggagggcagatcgcgtgat
ggtggtcttcgcttcggcgagatggaacgtgattgtcagatctctcacggctcagcccag
ttcctgagggagagactgttcgaggtatctgatccttatcgagttcatgtctgcaacctg
tgtggactcattgctattgcaaacttgaggaacaacacgtttgagtgccgtggctgcaag
aataaaactcagatatctcagattcgtttgccctatgcctgcaagctcctcttccaggag
ttgatggccatgagcattgcaccacggatgatggtcatgccggagggaaaagcctga
DBGET
integrated database retrieval system
