Acanthaster planci (crown-of-thorns starfish): 110980117
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Entry
110980117 CDS
T05078
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03020
RNA polymerase
aplc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110980117
09124 Replication and repair
03420 Nucleotide excision repair
110980117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aplc03021
]
110980117
03400 DNA repair and recombination proteins [BR:
aplc03400
]
110980117
Transcription machinery [BR:
aplc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110980117
DNA repair and recombination proteins [BR:
aplc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110980117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Circovir2_Orf4
Motif
Other DBs
NCBI-GeneID:
110980117
NCBI-ProteinID:
XP_022092161
UniProt:
A0A8B7YKV8
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MPYANQPSITISELKEDNVKFVIEDTDLSVANSLRRVFIAETPTLAIDWIQIEANSSVLH
DEFISQRVGLIPLTSDDFVDRMNYNRDCTCDEFCPECSVEFILDVKCTDDQTRHVTSRDL
ISNNPKVVPVTSRHREDESSEYGESDDILIVKLRKGQELKFHAFARKGFGKEHAKWIPTA
AVAFEYDPDNAFRHTVYPKPEEWPKSEFTELDDETSEAMFDSSSNPRKFWMNVESCGALR
PENIVLSGLAVLKKKLSDLQTQHSHETQSEGLAIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgctaatcagccatccattacaatcagtgaactgaaagaagacaacgtgaaa
tttgtgattgaagacaccgatttaagtgttgcaaacagtctgcgtcgggtgttcattgca
gagacacctacattagccattgattggattcagattgaagctaatagctcagtcttacac
gatgagttcatctctcaacgagtaggtttaattcctctgacgagtgatgactttgttgat
aggatgaactataacagggactgtacctgtgatgagttttgtccagagtgttcagtggag
tttatcctggatgtcaaatgcacagacgaccaaacacggcatgtcacatcacgagatctc
atctcaaacaatcctaaagtagtccctgtgacatcaagacatagagaagatgagtcgagt
gaatatggtgaaagtgacgatatcctcattgtcaaattgcgtaagggacaggagctgaaa
ttccatgcctttgccaggaaaggttttggcaaagagcatgccaaatggattccaactgct
gctgttgcctttgagtatgatccagataacgcttttcgacacactgtctaccccaagcct
gaggaatggccaaagagtgaatttactgagctggatgatgaaacatctgaggcaatgttt
gactcaagttccaacccaagaaagttctggatgaatgtggaatcatgcggtgccctcagg
ccagaaaatattgtgttgtccggcttagcagtactcaagaagaaactgagtgacttacaa
acacaacacagtcatgagacacagagtgaaggattggcaatcaattaa
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