Acanthaster planci (crown-of-thorns starfish): 110980140
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Entry
110980140 CDS
T05078
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110980140
Spliceosome [BR:
aplc03041
]
Common components
Common spliceosomal components
General mRNP proteins
110980140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RBD_DEAH11
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
110980140
NCBI-ProteinID:
XP_022092207
UniProt:
A0A8B7YHW5
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MALYGEDLDVEALLEAPYKNSEEEATSKNGVPEKEPSPKKKHRSSRSRSRSPPDSKDKDK
HSSSSSSKKSSSRRRSRSRSPERKRRSRSPDRRRRSRSRSRDRSTSTRHDRDRDRDRGRG
LGRYGRQGKRSPTPPRRGRRSRSKERSPHRDPFHWRRSRSRSRDRYGKRGSSPGRKKDIE
PPPETRDARTVFVMQLSQRVRAKDLEEFFSSVGKVRDVKIISDRNSRRSKGIGYVEFMSD
ESVPLAMGLNNEKLMGVPIVVQPSQAEKNRLAQNNQTLQKGGAGPMRLYVGSLHYNITEE
MLRGIFEPFGQIDSIQLMTDSELKRSKGYGFITFHDADDAKRALDQLNGFELAGRPMKVN
HVTERSDNAQATSVLDNDELERTGIELTTTGRLQLMAKLAEGTGFQLPSAVVEALNPLAN
VPTGPAVQTSMLPSVGQVSLQAQLAAAQQQAAALASQVAPTGTPAMPAAPAATNPPCFML
SNMFDPTSETSTNWETEIRDDVIEECNKHGGVLHIHVDRTSPQGNCYVKCPNAQIAVAAV
NSLHGRWFAGKMITAAFVPLANYHAIFPESAVATTLLQPSLKMM
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtacggagaggacctggatgtggaagcgcttcttgaagctccatataaaaac
agtgaggaagaggcaaccagcaaaaacggtgtgccagagaaggaaccatcccctaaaaag
aaacacagaagtagccgtagtcgcagccgtagccctcctgactccaaagacaaagataag
cacagcagtagcagcagcagcaagaaaagtagtagcaggcgtcgcagccgtagtcgcagc
ccggaaaggaaacgacgcagtcgtagcccagacaggagacgtcgtagccgaagtcgcagc
cgggatagaagcacaagcacacgccacgatagagacagagaccgagacagggggcgtggc
ttgggcagatatggcaggcaggggaagcggagtccaacacccccacgtcgtggccgtcgt
agccgcagtaaagagcgtagtccccatagagatccgttccattggagacgaagtcgctct
cgtagcagagaccgatatggcaagagaggttcaagtccagggaggaagaaggacattgaa
cctcctccagagacaagagacgctcgcactgtgttcgttatgcagttatcacagcgagtc
agagccaaagacttggaggaattcttctcttctgttggaaaggtacgtgatgtgaagatc
atctcagaccgcaactcgaggcgttctaaaggcatcggatatgtggagtttatgtcagat
gaatcagtcccactggcgatgggtctgaacaacgagaaactgatgggagtgcccatcgtc
gttcaaccatcccaagctgagaagaatcgcttggcccagaataatcagacgttacagaaa
ggaggggctggtcccatgaggctgtatgtaggctcgcttcactacaacatcactgaagag
atgctcagaggcatctttgaaccctttgggcagattgactccattcagctgatgacagac
agtgaattgaaacgttccaaaggttatggctttatcacgtttcatgatgccgatgatgcc
aagagggcgctagaccagctgaatggatttgagctggctggccgtccaatgaaggtgaac
catgtaacggagagatcagacaatgcgcaggcgacatcagtgctggataatgacgagctg
gagagaacagggattgagctgacaaccactgggagactgcagctcatggccaagctagct
gaaggtactggattccagctgcctagtgctgtggttgaggctctcaatccattggctaat
gtccctacgggcccggccgtccaaacaagcatgctgccctctgttggccaggtctcactg
caggcgcaactagcagcggcacaacagcaggcagcagctctggccagtcaagtagctcct
acaggaacaccagccatgccggctgcaccggctgcaactaaccctccctgtttcatgctg
tccaacatgtttgacccaacatctgagacctcgaccaactgggagacagagatccgagac
gacgtgattgaggagtgtaacaaacatggaggtgtgctacacattcacgtggacaggacc
tcacctcagggaaactgctacgtcaaatgtcccaatgcccagattgctgtggctgcagtg
aacagtctgcatggcagatggtttgcaggcaagatgatcaccgcagcatttgtaccgctg
gccaactaccatgccatattcccagaatcagcagtagccacaacattgctccagccatcg
ctgaaaatgatgtag
DBGET
integrated database retrieval system
