Acanthaster planci (crown-of-thorns starfish): 110980282
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Entry
110980282 CDS
T05078
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110980282
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110980282
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110980282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
zf-C2H2_DHX34
DEAD
HA2_C
HA2_N
AAA_22
zf-C2H2_4
nSTAND3
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
110980282
NCBI-ProteinID:
XP_022092525
UniProt:
A0A8B7YJE0
LinkDB
All DBs
Position
Unknown
AA seq
1352 aa
AA seq
DB search
MESRKSTHSSHHDRSHDRRRHKHSERERQDERRDNVKKTSDCSHKSRHSRSHKGDRSSDP
RHRTEKYHDQSRVYQHSNDDGERESYSHSESYSYSSSTYRSRDPTRPSSRREDETRTETG
RRSKDGRKRTSKAWSYFGYTADDIPLPDEHDKSSRNVEPSGKNTDTITDRNTGGLSARAH
QDRGYRSLGMQGSRAESDRCPDEKAETARDSDGIFDWKRHRRELDAIFFRDDSIIQRKSE
DYQDFWKFLERYQAFQFKQSARQPHQDKSDADDKDGSAKSAVLGLPLKYDKRHRINMALD
LRGVEEAERRLEWLTSSQDDEDELSTARIKEFSKVLLYYMDFCQKQQFAKLAKLLRDRAN
LPIARYQDMIVEATRANQVVIVAGDTGCGKSTQVPQYLMKAGFKGIACTQPRRIACISLS
KRVGYETLHEYGMEVGYQIRFEASKSAATKILFLTEGLLLRQLSLDPTLQQYNVIILDEV
HERHLHGDFLLGVLRCLLEQRQDLKLVLMSATINIGLFSGYFDKAPVIQVPGRLFPIKLE
YAPISIEEQSSKSEKLDPRPYLRIMQQIDMKYPATERGDLLIFLSGMSEISSVVEAAKLY
AATTQTWIVLALHSTLSIAEQDKVFDVAPEGVRKCIVSTNIAETSVTIDGIRFIVDSGKV
KEMSYNAEAKMQQLQEFWISRASAEQRKGRAGRTGPGVCFRLYEESRYSDFQEYSTPEIH
RVPLDSLILQMMALGLHDPRKFPFIEPPPATSIESSILFLKEQRALSKEERLTPIGRLLA
DLPVDVVIGKMLIMATIFKMIEPVLCIAAALSVQSPFTSRAHRSEAMTARCPLESDHGDP
FTLLNAFDEWIQVKAKGLPALKWCKRRGLEEQRFYEMSKLKRQFEDLLRDHNLVERLSDP
SERKFSSAERYQRNLEKKKLRELKRKEHSGPKKRKLLRLGQENFDESGDDEDEPGSDLKS
LEFKLTHDLNRLQTAASLNRSFTLRELNLLKVILCSGLYPQLAIADDCNTYRRECDQVFH
TKAKPFVLLHPTGVFANNPSILEPPEEKDEAGNACSRGVRSSRHQLIAYVSLLETNKPYL
VNTMRVPALQTMLLYANCLDTNQACTRIVVDEWIELTIADVDTAEHVMSAVIQLRAAWLQ
LLEMRLQDTKLSHPDESTSVSNLRVLHQERLLSSKLAEFLDCHVEYTMRKLGSTELQNLY
LGPHRGQGSEGNKDDFFTSQSRDGKIHPTKGGTQVNDYLTFGCLYNVASDPLGEFSSVIR
RHWTCPHCTQTLIITTLEKLQHEAECLQLSQAAAVKKDVQIVAENASDHGNSSDMATLRR
QYQCPICNEEFSFTSSEILKHKRMHAKETSRE
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagaaaatcaacgcacagtagtcatcatgatcgttcccatgatagacgcagg
cacaaacacagtgagcgtgaacgacaagatgaaagacgcgacaatgtgaaaaagacttca
gattgtagccataaaagcagacattcgaggagccacaaaggggacaggagtagtgacccc
agacatagaaccgagaagtaccatgaccagagtagggtgtaccaacattcgaatgatgac
ggggaacgagaatcatactcccactcagaatcatactcctactcaagctccacgtatcgt
agcagggacccaactaggccttcatcaaggagagaagatgaaacaagaactgagacagga
cggcgatcaaaagatggcagaaaaaggacgtccaaagcctggagttactttggctacact
gcagacgacattcctttgccagacgaacatgacaaatcaagcaggaacgttgagccttct
ggcaaaaacactgacacaatcacagaccgaaacacagggggactatcggctagagctcat
caagaccgtggatacagatctttggggatgcagggctcaagagctgaatctgacaggtgt
cctgatgaaaaggctgaaactgctagggacagtgatggtatatttgactggaagaggcac
agacgagagctggatgcaatattttttagggacgacagtattatccaaaggaaatcggaa
gattatcaggatttctggaagtttcttgagcgctaccaagcttttcaattcaaacagagt
gcccgacagccccaccaagacaagagtgacgcggatgacaaagacggctctgccaaatct
gcagttttgggactgccgctgaaatatgacaagagacaccgcatcaatatggcactagac
ctcaggggagtagaagaggccgagagaagattggaatggttgaccagcagtcaagatgat
gaagatgagctgtccacagcacgaatcaaggaattcagcaaagtcttgctctattacatg
gacttctgtcagaagcaacagtttgccaagttggccaagctgctccgtgatcgagccaac
ctacccatagctcgctaccaggacatgatcgtagaggcaaccagagcaaaccaggtcgtc
attgtggctggagacactggctgtgggaaatccacccaggtaccgcagtacttgatgaaa
gcgggcttcaagggcatagcctgcacccagcctcgccgcatagcttgcatatccctctcc
aagcgggttggctatgaaaccctgcatgaatatggcatggaggtagggtaccagatccgg
tttgaggccagtaagagtgcggctaccaagattctgttcctgactgaagggctactactg
cggcagctgagtttggaccccactctccagcagtacaacgtcatcatcttggatgaggtc
catgaacgtcatctccatggcgacttcctcctgggggtactccgttgcctcctggagcag
agacaggacctcaagctggtgcttatgtcggccaccatcaacattggactcttctctggc
tactttgacaaggcaccagttattcaagtccccggtcgactatttcctatcaaacttgaa
tatgccccaataagtatagaggagcaaagttcaaaatcagaaaaactggatccccgtccc
tacctgcgcatcatgcagcagattgacatgaagtacccagccacagagagaggggacctg
ctgatattcctgagcggcatgtccgagatttccagtgtagtggaagcagctaaactctat
gctgcaacgacgcaaacgtggattgtgctggcgctgcacagtacattgtccatcgctgaa
caggacaaagtgtttgacgtagctccagaaggtgtcaggaaatgtatcgtgtccacaaat
attgcagagacttcggtgacaattgatgggattcggttcattgttgactctggcaaagtc
aaggagatgagctacaatgcagaggccaagatgcaacaattacaagagttttggatcagc
agggccagtgctgaacaacgtaaaggaagagcagggcgtactgggccgggcgtctgcttc
cgtctctatgaggaatcacggtacagtgatttccaggagtactccaccccagagatacac
agggttccactggactcgctgatcctacagatgatggcactgggactccacgatcctagg
aagtttccattcattgaaccacctcctgctacaagcatcgagagctccatcctgttcctc
aaggagcagagagctttaagcaaggaggaaaggctgactcccattggtcgactcctggct
gatctgccggttgatgttgtcatcggcaagatgctcatcatggccaccattttcaagatg
attgagccagtgttgtgtatagcagccgctctcagcgttcagtcgccgttcaccagcagg
gcacacagatctgaagcaatgacagcgcggtgccctctggagtctgatcacggtgatcca
ttcacgttgctgaacgcttttgacgagtggattcaggtcaaggccaagggtttaccagct
ctcaagtggtgtaaaaggcgaggtctggaggaacaacgcttctatgaaatgtccaagctc
aaacgacagtttgaggaccttctcagggaccacaatcttgttgagagattgagcgaccca
tcagagagaaagttcagcagtgccgaaagataccaaaggaatttggagaaaaagaagttg
agggagctcaagagaaaagagcacagtgggcccaagaaacgtaaacttcttcgtttgggc
caagagaactttgatgagagtggcgacgatgaggatgagccaggaagtgacctcaaaagc
ctagagttcaaactgacccatgacctcaaccgcctgcagaccgcagctagcctgaaccgt
agcttcacactgcgagagctgaatctcttgaaggtgattctctgcagtggactctaccca
cagctggctattgctgatgattgtaacacctatcggcgagagtgtgaccaagtattccat
accaaagccaaaccgtttgtgctgctccatcctactggagtgtttgccaacaatccatcc
atccttgagcccccagaggagaaggatgaagcgggcaatgcttgttccaggggggtgagg
agcagcagacatcaactgattgcttacgtatctctgcttgagacaaataagccatatctt
gtcaataccatgagggtaccagctcttcaaacgatgctactctatgcaaactgtctggat
accaaccaagcatgtacaagaattgtagttgatgagtggattgagttgaccattgctgac
gtggacactgctgagcatgtgatgtcagcggtgattcagctgagggcagcctggctccaa
ctgctggaaatgagactacaagatactaagctgtctcatccggatgaatccaccagcgtc
agtaatctaagagtccttcatcaggagagactgttgtcaagcaagctggccgagttccta
gattgccacgtggagtacaccatgcgtaagctgggctccaccgagcttcagaacctgtac
ctcggaccacacagaggacaaggaagtgaaggaaacaaagatgatttcttcacatctcag
agccgagatggtaaaatccatccaacaaaaggagggactcaggtcaatgattacctgacc
tttggctgtttgtacaacgtcgccagcgatcctctgggtgaattcagctcggtaatccgc
cgtcattggacttgcccccactgtacccagaccttgatcatcaccaccctggagaaactt
caacacgaggcggaatgtctgcaactctctcaagctgccgctgttaaaaaagatgtgcag
attgttgcagagaacgcaagtgaccatggcaacagcagcgacatggcaacactcaggagg
caataccagtgtcccatctgtaacgaggagttctccttcacctcctctgagatcctcaaa
cacaagaggatgcatgccaaggagacgtcaagagaatga
DBGET
integrated database retrieval system
