Acanthaster planci (crown-of-thorns starfish): 110980347
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Entry
110980347 CDS
T05078
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110980347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110980347
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110980347
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110980347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
110980347
NCBI-ProteinID:
XP_022092640
UniProt:
A0A8B7YJP5
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MGDKRKLQGEIERCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKTWAASNEIKDKRTLLENRKLIEIQMERFKVVERETKTKAYSKEGLGLATKIDPIQKE
KDDITMWLAHCIESLNIQVDQFESELENILSSSKKRKVPSDKQERVEELQSWLDKNRFHI
NKLETLMRMLDNSTIEVEQIKKIKDDVEYYIDSSQEPDFEENEFIYDDLDIDEESLSNTL
LAASPDDDVMTNTSGDTPISSSPTLLPSPSSNHSKDKNEEDKKRRTDSESSSSPRKGGKS
ATSSSQSNRPTIVRAASTPSTTLVNSLPSSGVSSINQSNTNKSSLSKANSVPVPSTQHAI
AQPPSGPAYAVAAGAQHNSSSSQASVVSTQGVRLAQEPPHTQPSTQVQTNNTQQPRPSLN
GPHTAAFNMSSVENSIDHISKTVVSKSSVPSQPVPTAAVAPTTTPASTAPTPAQVTQQQQ
QQQSQQQSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKPLQTPVPEPVERVPTS
QPVPVIAPTPKPSEPVMTNGPISPKAKEVSQCDLVTTSHYSSMPPRLLPPAGVSHQETND
TTEGEKEFKDYTVESRAIYESTSQAETSSPPMQEAIIPPSLGVAPLGPGIMTKDQLYQQT
MMEAAFHHLPHPSDSERLRNYLPRNQCPTPPYHCQVMPPQMDSLDFFQRLSTESLFFIFY
YQEGTKAQYLAAKALKRQSWRFHTKYMMWFQRHEEPKTITDEYELGTYIYFDYEKWSQRK
KEGFTFEYRYLEDRDL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataaaaggaagcttcaaggtgaaatagaaaggtgcttgaagaaggtgacggaa
ggagtggaaacctttgaggacatctggcaaaaggtccataatgctaccaacagtaaccag
aaagagaagtatgaagcagatctcaagaaagaaatcaagaaacttcagcggctacgagat
caaatcaaaacgtgggctgcctccaacgaaatcaaagacaagaggacacttcttgaaaac
aggaaactcatagagatacaaatggaacggttcaaggtggtggaacgggagacgaagacc
aaggcgtactccaaggagggcctgggcctagccaccaagatcgacccgatacagaaggaa
aaggatgacatcaccatgtggctggcacactgcatcgagtcgctcaatatccaggtggac
cagtttgagagtgagctagagaacatcctctccagctccaagaagaggaaggttccctca
gataagcaagagagagtggaggagctccagagctggctcgacaagaaccggttccacatc
aacaagttggagacactgatgagaatgttggacaacagcacgatagaagtcgaacagatc
aagaaaatcaaggacgatgtggagtattacatcgactcgtcacaagaaccggactttgag
gagaatgagttcatctacgatgatcttgatatcgacgaggaatctttaagtaacactttg
ctcgctgcgtcaccagacgacgacgtcatgaccaatacctccggggacacgcccatcagt
agctcgcccacgctactccccagcccaagctccaaccattccaaagacaagaatgaggag
gataagaagagacggacggacagcgagtcctcgtcatcgccaaggaaagggggcaaaagt
gcaacatcgtcgtcacagtcgaatcggccgaccattgtcagagcggcgtcaacgccaagc
acaacacttgttaactcgctgccgtcgtcaggggtatcatcgataaaccagtcaaacacg
aacaagagcagtctcagtaaagccaatagtgtaccggtgccctcaacacaacatgcaata
gcacagccaccatcagggcctgcctacgccgtagccgcaggggcgcaacacaattccagc
agctcacaagcttcagtagtttcaacacagggggtgagactggcccaagagccgccccac
acgcagccaagcacacaggtccaaaccaacaacacgcagcagccaagaccgagcctcaac
ggcccccacacagcagcattcaacatgtccagtgtggaaaactccatcgaccacatatcc
aaaactgttgtctccaagagcagtgtcccaagccagcccgttccaacagcagcagttgcg
ccaaccaccacaccagcgtcaacagcaccgacgcctgcccaagtcacacaacagcaacag
cagcagcaatcacaacagcaatctcaacaacaacagcaacaacaacagcagcagcaacaa
caacaacaacaacaacagcagcagcagcaacaacagcagcagcagcagcaacagcagcag
caacaacagaagccgctgcaaacacctgtccccgagccagtggagagagtgccaacgtca
cagcctgtaccagtcatcgcaccgaccccaaagccatcggaaccagtcatgacaaatggg
cccatcagcccaaaagcgaaagaggtgtctcagtgtgacctagtcaccacgtctcactat
tcctcaatgcccccacggctgttacctccagccggggtgtctcatcaggagacgaatgat
accacagaaggagagaaggagttcaaggattacacggtggaaagcagagcaatatacgaa
agtacttctcaggcggaaaccagctcccccccgatgcaagaggccatcatccccccgtcg
ctgggcgtagcgcccctgggcccgggcataatgaccaaggaccagctgtaccaacagacc
atgatggaagcggcatttcaccacctgcctcacccctctgactcagagagattacggaac
taccttcctcgaaaccagtgtccaacacccccttaccactgtcaggtcatgccccctcag
atggactccttagatttctttcagaggttgtcgacggagtcgctcttcttcatcttctac
taccaagagggcactaaagcccagtaccttgctgcaaaagcgttgaagaggcaatcgtgg
agattccacaccaagtacatgatgtggttccaaaggcatgaagaacccaagaccatcaca
gacgagtacgaactgggaacgtacatctactttgattatgagaagtggagccagcggaag
aaggaaggattcacatttgagtatcgatacctggaagacagggatttatag
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integrated database retrieval system
