Acanthaster planci (crown-of-thorns starfish): 110980373
Help
Entry
110980373 CDS
T05078
Name
(RefSeq) CMT1A duplicated region transcript 1 protein-like
KO
K10266
F-box and WD-40 domain protein 10
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aplc04121
]
110980373
Ubiquitin system [BR:
aplc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110980373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
F-box-like
Beta-prop_DCAF4
NBCH_WD40
F-box
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
WD40_like
Beta-prop_RIG_1st
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
110980373
NCBI-ProteinID:
XP_022092687
UniProt:
A0A8B7YJ90
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MKHPAENVEHFEYNLGKAPELRCEYGTVTTSCDKCESCRIRNRLSQTRQWFQRAGEQTRR
TFTLGLVRRFHSFNLLRYAVNLLHPLIGKDFTYARSRMHPSVVGDGASTGQDRALWTSKT
EQTVTETWQWFQQAKYWSKANYLLGVLQMCNGELLYRIGTLARTMLASEERASQGVCDED
YEKESLADTVYSYSSNTYPQNDLLRTAGHEYSSSVCCPFDSCEYLDSAHILVEDGEEDSE
AAGTVNSFEMSSIDPTLCVMPTSRSALGGVWHHRDFIRDLPVHLSKSILSYLDYGDLVSC
MGVSRHWAHIAKEVEEDLRMRQLLWEEVMLMQGSSAQGGNPVFASYRTVPVPRLMGDGLT
VAPSDLPAMEVDFKSEINMSSSYSGIVTDNVEMEERNVYCGAYNVMVLSDQDDFNRVVSY
NYGQLVAIGSFDRHVRFLDVATGHDTGPVITGHAGSIKCLYINDREGYVLSGSFDTSIRC
WDVKTGKPQRIFHGHQDTILCLDMSHDRKDSLVVSGGKDNVVKVWNFSTGKCLRTFKHIH
QVTAVAIHGDRVVSGCEGGRVKLWSIKDACLIKMLYQSPKNTNRFGFINPHTHQGPITSV
RLDRWHVVSGSRDGYALVWSALGDHKRCVTALRHPKEVLCLEMSYLRVITGCEDGKLRIW
NMLSGDCLRVMRGNSRSDPIEDIYPCGERLVLHTVNNLLVLCFEEVQWDYEQEEKIELLR
YKNHYGDAPLRKHTYPYVRAQRSERAGASNPKIIHHLRGTSKPDTSSQLGHSGRTLHDRS
LQSAKMIQKQFKAVEFASSLKGSVYHNVQGSQPDGPIPPGAKSGSATYARSRAGSSRPQT
ATTLTRPSTASVRSATGAPSRATTPASVSHSETVRPKSQQNIRACSPTVLSRPPTGIMKG
KSRPTTAFSTKSAILKRAKFELPMRGHSAPVRRQNVGDALSLSEAKALIRSQERTRDVPT
PRDRLVLTINCIESSKKNTELVNNTTANCLEIDYKPRAESPPPSQCTVRSPEIRRQKGKS
QVGAVSSPESTVVVQFRTVEYDNKPHISLHPEATLSSIPKQTVICQQPTKPVLTRPSSGR
VPSTEKPKILRRSQSANAILTSDKPSIVPSTQTEAAVRKKTFHGWTTSHTEPIVLSPMLM
QGPSGTAPSMQSPRKQRHSVTKVVMGPPVEVKDPLKSHKEFQIRTREQTEGYLNWVTEIQ
HRYTKEKATQAEALQKKLWLAKAKGQTHQDLTKKPRVFAPEIGE
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatcctgcagagaacgttgaacacttcgagtacaatctcggcaaagcaccggaa
cttcgatgtgagtatggcacagtgaccacgtcctgcgacaagtgtgagagctgccggata
cgcaaccgcctgtcccagacacggcagtggttccagcgggccggcgaacagaccaggagg
acattcacactgggcctggtgcgacgtttccacagcttcaacctcctgcgctatgcggtg
aacctcttgcacccgctcatcggcaaagacttcacctatgcccgctctcggatgcacccg
agcgtcgtgggcgatggggcaagtaccggacaggacagggcgctctggacgtcaaaaacg
gagcagacggtgactgagacctggcagtggttccagcaggctaaatactggagcaaagcc
aattacctgcttggggtgctacagatgtgtaatggagaattgttgtacagaattggaact
ctggccagaacgatgcttgcatcggaagagagggccagtcaaggagtttgcgatgaagat
tatgaaaaggaatctctggctgacactgtctactcctacagttccaacacctaccctcaa
aatgacctgctgcggacagctggccatgaatattcatcatccgtctgctgtccatttgac
tcgtgtgaatatttggactccgcccacatccttgtggaggacggagaggaggactctgaa
gcagccggcacagtcaactccttcgaaatgtcttccattgaccccaccctctgcgtcatg
cccacctcccgctccgccctgggcggggtatggcaccaccgggacttcatccgagacttg
cccgtccacttgtccaagagcatcctgagctatctggactacggggacctggtgagctgc
atgggtgtcagccgccactgggcacacatcgccaaggaggtggaggaagacttgaggatg
agacagttgctatgggaggaagtgatgttgatgcagggatcttctgctcaaggaggcaat
ccggtgtttgccagctaccgcactgttcccgttccacgattgatgggtgacggcctcacg
gtagctccttctgacctccctgccatggaggtggattttaagtcagagatcaacatgagc
agctcctacagcggcattgtgaccgacaacgtggagatggaagagaggaacgtgtactgt
ggagcttataatgtcatggtgctttcagatcaggatgatttcaaccgagtggtctcctac
aactacggccagctagtggccataggatcttttgaccgtcatgtcagattcctggacgtg
gcaacaggccatgataccgggccagtgatcaccggccatgctggatctatcaaatgtctg
tacattaatgatcgcgagggatatgttctcagtggaagctttgacaccagcatcaggtgt
tgggatgtgaagactggcaaacctcaaagaatcttccacggccatcaggataccatcctc
tgcttggatatgtcccacgaccggaaagacagcctcgtggtgtcaggcgggaaggataac
gtcgtcaaagtctggaattttagcacgggtaaatgtctacgcaccttcaagcacatacac
caggtgacagcggtggccatacatggtgatagggtggtgagcggatgtgaggggggacga
gtcaaactatggagtatcaaagatgcttgcctcatcaaaatgctgtaccagtctcccaag
aacaccaaccgctttggcttcatcaacccccatacccaccaggggcccatcaccagcgtc
cggctggacaggtggcatgtggtgtcggggagtcgggatggttacgcactggtctggagt
gccctcggggaccacaaacgatgcgtcactgcactcaggcatcccaaggaggtgctgtgc
cttgagatgtcctacttgagggtcatcaccggctgtgaggatggcaagctacggatctgg
aacatgctgagtggggactgcctgcgcgtcatgagaggaaacagccggtccgacccaatt
gaggatatctacccgtgtggggaaagattggttctgcatactgtcaacaacctgttggtt
ctgtgctttgaggaggttcagtgggactacgaacaggaagagaagattgaacttctgcgc
tacaagaaccactatggcgatgcccccctcaggaagcacacctatccttatgtccgtgcc
cagcgcagtgagcgggcaggagccagcaaccccaagatcatacaccacctgcggggcacg
tccaaaccagatacctcgtcgcagctggggcacagcggccgcacgctgcacgaccggagc
ctgcagagtgccaagatgatacagaagcagttcaaggcggtagagtttgcctccagtctg
aaggggagtgtgtatcacaacgtccagggttcacagcctgacggccccatcccgccgggg
gcaaagtcgggctcggccacctacgcaagatcccgagctggttcctcaagaccacaaaca
gctacaactctgaccaggccatccacagcctcagtgcgatcagcaacaggtgctccttca
agagcaacaacccctgcctctgtcagccattcagagacagtgagacccaaatcacagcag
aacatcagagcctgctccccgacagttctctctcgccctccgaccggcatcatgaaaggg
aaatccagaccaacgactgccttctccacaaaaagcgcaatcctaaagcgagccaaattt
gagctgccaatgcgtgggcacagtgcccctgtcaggaggcagaatgttggtgatgccttg
tctctgtctgaagccaaagccttgataagatcccaggagcgcaccagggatgtcccaaca
cctcgggataggctagtgctgaccatcaattgcattgagagctcaaagaaaaacacagag
ctggtgaataacacgacagcaaactgcttggaaattgattacaaaccccgtgcagagagc
ccaccaccaagccagtgcacggtcagaagtcctgagatcagacggcagaaaggaaagtca
caagtaggagctgttagttctccagaatcaactgtggtcgttcaatttagaactgttgag
tatgacaacaagccccatatcagcttgcatcctgaagcgacgctgtctagcatcccaaag
caaacggtgatatgtcaacagccaacgaaacccgtcctcacccgaccgagctcaggccgg
gtcccttcaacagaaaagccaaagatcctgagaagaagccagagtgccaatgccatcttg
acatccgataagcccagcatcgttccatcaacccagacggaggctgccgtccgtaagaag
accttccacggctggaccacatcgcacaccgaaccgatcgtcctcagtcccatgctgatg
cagggcccaagtggcacggcacctagcatgcagtcgccgcggaagcaacgccacagtgtg
acgaaggtcgtcatgggaccgcccgtggaagtcaaggatccgctcaagagccacaaggag
ttccagatacggacgcgggagcagacagaggggtatctgaactgggtgactgagatccaa
cataggtacaccaaggagaaggcgacacaggccgaagcacttcaaaagaagctatggcta
gcaaaggccaaaggtcaaactcatcaggacttgacgaagaaacctagagtttttgcacca
gagataggagaatga
DBGET
integrated database retrieval system
