Acanthaster planci (crown-of-thorns starfish): 110980793
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Entry
110980793 CDS
T05078
Name
(RefSeq) regulator of nonsense transcripts 3B-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03013
Nucleocytoplasmic transport
aplc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110980793
03015 mRNA surveillance pathway
110980793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110980793
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110980793
mRNA cycle factors
P-body specific factors
110980793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
110980793
NCBI-ProteinID:
XP_022093457
UniProt:
A0A8B7YLE5
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MTKEVKNEKSSGKEDASEKRKVKEAPSTKVVIRCLPPTLTEADFLEQISPLPNNNYLYYV
KADRSLEVNAFCRAYINFINPEDIVPFRDQWDGYSFTDAKGTEYPAVVEFAPYQKIPKKQ
GRKVDPRCGTIENDDDFKVFAESLQAEVERLPSAETYLEELEAKLSEKEAKELTPLLAFL
KNKKLERVKIRQEARDERRRKEREQKKREEERRRQREKQQRQREREAKEKARDKKEGEKE
EPQKIKLLKKPEEEKKDRKEDAAAMDAKGKEKMGRRDQARRDDSRKERDTKPQAKPDRED
RERPPRHKDRDPERERRDREREHQRTREKERNKDRGGERQPDRDRDRHHGGDRGGGERDR
GRDKDVGAAPEKRSPKDSDSSSKGQAPRDDKRRDSHSDRQVRGGGRDSERAKRNEPPSRG
SDQRRSEKSDVARQSKSAALNGEGSSGRKDEKEIASADKRPACGRRSSDLGTDSSEGSSE
KSGKSTRGKEGTDRLRNKDRPAMALYKPGQRLSSSKSHEDKELGDKAKGQRSSPRDGDAK
PVSQPDQVKTGSERRDGRRESKDSGGGQDEGAFPGKGGGKGQGRHDHRREDRNRRDGHGS
RGGEQRPPRREGGKEDRPKRDDRPRERDRGTGQTRDGDKVQSSESSKSDSSDKLRDKGSA
THREGDKSQDKPRDRGGDKRGGTPRDGDRHRDRGGDRGRDRGSDATKDRKGDRPRDRGSD
KPKDKRVDKPREKEGQKPAEKGNEKQPDK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaggtgaagaacgaaaagtccagcggcaaggaagatgcaagtgagaagagg
aaagtgaaggaggcaccgagtacgaaggttgtgatccggtgtcttcctccgactctaact
gaagccgactttctggagcagatttccccgcttccgaacaacaattacctatactatgta
aaagcggaccgaagtcttgaagtcaatgccttctgccgagcctacatcaacttcatcaac
ccagaggacatagtacccttccgagaccagtgggatgggtattcattcaccgacgccaaa
gggactgaatatccagcggtggttgagtttgctccctaccagaaaatccccaagaaacaa
ggtcggaaggtggaccctcgctgcggcaccatagaaaacgacgatgatttcaaggtgttt
gcagagtcgttgcaggcggaggtggagcgtttgcccagcgcggagacgtacctagaagag
ctggaggccaaactcagcgagaaggaagctaaagagttgacgcctcttctggccttcctc
aagaacaagaaactggagagggtcaaaatccgtcaggaggcccgggacgagcgacggcgg
aaagagcgcgagcagaagaagcgggaggaggagcggaggcggcagcgggagaaacagcag
cgacagcgggaacgggaggccaaggagaaggcgagagacaagaaggaaggggagaaagag
gaaccccaaaagatcaagttactcaagaaacctgaagaagagaagaaggaccggaaagag
gatgcggcagccatggatgcgaagggcaaggagaagatgggcagacgagaccaggccaga
cgagatgacagtaggaaggagagagacacaaagccccaagcgaaaccggacagagaggac
agggaaagacccccccgacacaaggaccgagaccctgagcgggaacggagggacagggag
agggaacatcagcggacgagggagaaggagcggaacaaggacaggggtggggagagacag
cccgacagagaccgtgacagacaccatgggggagaccgtgggggaggagagagggacagg
ggacgagacaaggatgtgggagctgcaccagagaaacgctcgcctaaagattcagactcg
tcatccaagggacaggccccaagggacgacaagcgaagggattcccactcagaccggcag
gtaagaggaggcgggcgggacagtgagagggccaagaggaatgagccgcccagcaggggc
tctgaccagaggcgatctgagaagagtgatgtggcccgccagtccaaatcggctgccctg
aacggggagggctcgtctggcaggaaggatgagaaggaaattgcctcggctgacaagaga
ccggcatgcgggaggaggagctcggaccttggaacagactcaagcgaggggtcgtcagag
aaatccggaaagtcaacaagagggaaggaggggaccgatcgccttcggaataaggaccgg
cctgccatggccctttataagccaggtcagaggttatcatcttccaaaagccatgaggat
aaggagctgggggacaaggccaaaggtcagaggtcgagcccccgggatggtgatgccaaa
ccggtgtcccaaccagatcaggtgaaaactggcagcgagcgaagagacggacggagggag
agcaaagattcgggcggggggcaagacgaaggcgccttcccaggcaaagggggaggcaaa
ggccagggacggcatgaccatcggagggaggacaggaacaggagagatgggcatggctca
cggggcggagagcagagaccaccaagacgagaaggaggcaaggaagaccgacccaaacgg
gatgacagacccagggaaagagacagaggcactggtcagaccagagatggggataaagtg
cagagcagtgaatcatccaagagtgatagcagcgacaagctacgggacaaagggagtgcc
acacacagagagggtgataaatcccaggacaaaccacgggacagagggggtgacaaaagg
ggtggcacaccccgagatggtgacagacatagagaccgaggtggggaccgaggtagagac
aggggtagtgatgccactaaggatagaaagggtgacagaccccgcgatagaggcagtgac
aaacccaaagacaaaagggttgacaaacccagagaaaaagagggacagaagcctgcagaa
aaggggaatgagaaacagccagacaagtag
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