Acanthaster planci (crown-of-thorns starfish): 110980878
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Entry
110980878 CDS
T05078
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03440
Homologous recombination
aplc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110980878
03460 Fanconi anemia pathway
110980878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aplc03032
]
110980878
03400 DNA repair and recombination proteins [BR:
aplc03400
]
110980878
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
110980878
DNA replication proteins [BR:
aplc03032
]
Eukaryotic type
DNA Topoisomerases
110980878
DNA repair and recombination proteins [BR:
aplc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
110980878
FA (Fanconi anemia) pathway
110980878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_NUD
Zn_ribbon_GRF_2
Lar_restr_allev
zf-CCHC
DNA_ligase_ZBD
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
110980878
NCBI-ProteinID:
XP_022093607
UniProt:
A0A8B7YLT2
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MFLFTNHASCLLVGKVGKVLLRSFPTFCELWRSSSRVKTRASSIMARGLRVLNVAEKNDA
AKSLADLMSRGRYRRREGFSKYNKIYEYDYQLFNQDCSMTMTSVSGHLLNYEFVSTFKKW
HSCNPVALFSAEVLKGCPDDFKDIKRTLEREARQHDVLIIWTDGDREGENIGCEIVDVCK
SVKPRLDVYRARFSEITPQSVANACRNLGRPDERVSKAVDVRQELDLRIGAAFTRFQTLR
LCKVFPGILDGQLISFGSCQFPTLGFVVERYKQVEAFIPEMFYKIKVSHEVDDTKVDFNW
KRHRLFHRLACEVLLQVCLEDPMATVTDVSSRSKSKWRPLPMDTVELEKLSSRKLRIGAK
ETMKIAEKLYTKGFISYPRTETNMFPKDFNLRELVQEQTQDQRWGPFAAGILQEGPTPRQ
GNKTDNAHPPIHPTKYTDTLPGNDFKVYELIVRHFLACCSKDAQGFETTVQIKIASEEFS
AQGLMIVARNYLDVYPYDKWNAKVIPVFEQGQTFRPRAIEMAEGETSPPALLTEADLIAL
MEKHGIGTDATHAEHIETIKSRLYVGVRPDGKFVPGELGMGLVEGYDSMGYELSKPDLRA
ELEADLKKICEGVKDPDIVLREQIEKYRQVFIEAAANANMLDVALSGYFGQQPEAYIPEI
NEVAPVTPIRSCPRCGQPMVLKEKKEGGWMVSCTGYPACKAAVWFPAAILEASVSDEVCQ
TCKPGPVKKIQFKFKRGSVPAMMPTEYTGCVGGCDAMLKEALDLNLAYLRPATQPQVPTT
NARNDRGRGGAQRGGGGGNNRGGGRGGAFGTGGAGFGSGRRGGGARGGGGAGFGGPNQRG
GRGFSSNAPQSRPPLNQLPAGGQSFFAGSGGSGDNAVVCDCGNDALKLTVKKEGPNNGRQ
FYKCNSGNCNFFLWADENSTPNDSSSNQSSLGRKAGENSWNAQYSTGNTWSSGSSGYESG
KDSSSGLRTNNWGEVMCQCGQAAVLRTVQKEGPNKGRDFHCCGKPQGKQCKFFEWADGNN
NNSGWGTGASRGGGARHQPTWGDGRRGGFGKKGGASSGFGGGGDDTRKRKKPKCSLCNQE
GHTKRSCPMK
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttttaccaaccatgcaagttgtttgttggttgggaaggttggaaaagttttg
ctaaggtcgttcccaactttctgtgaattgtggaggtcatccagtcgagtaaaaactaga
gcaagttcaataatggcgaggggactgcgcgttctgaatgttgctgagaagaacgatgca
gccaaatcactggcggatctgatgtcgagaggcagatacagaaggagggaagggttttcc
aaatacaacaagatctatgaatatgactaccagctattcaaccaggactgcagtatgaca
atgacatcagtgtcgggacatcttctcaactatgaatttgtgtcaacttttaaaaaatgg
cacagttgcaaccctgtagcattgtttagcgctgaagttctcaaaggttgtcccgatgac
ttcaaagacatcaagaggacgttagaacgtgaggccagacagcatgatgtcctcatcatc
tggacggatggagacagggaaggggagaacattggctgtgaaattgtcgatgtctgcaaa
tcagtgaaaccacgactggatgtatacagagctagattttccgagatcacaccacagtcc
gtcgccaatgcttgtaggaaccttggtcgaccagatgagagagtgtcaaaagccgttgat
gtccgacaagagctggacctaagaataggtgcggcgttcacccgcttccagaccttgcgc
ctctgcaaggtgtttcccggcatcctggacggccagttgatcagctttggcagctgccag
ttccccaccctggggtttgtggtggagaggtacaaacaagtggaagccttcataccagag
atgttctacaagatcaaagtctctcacgaagtggatgacaccaaggtagattttaactgg
aagcggcaccggctgttccatcgcctggcctgtgaggtactgctgcaagtctgcctggag
gaccccatggccactgtcactgacgtcagcagcagaagcaagagtaaatggagacccctg
cccatggacacagtggaacttgagaagctatcatctcgtaagctgcgcatcggtgccaag
gagaccatgaagattgctgagaagctgtacaccaaagggttcatcagttaccctcgcact
gagaccaacatgttcccaaaagacttcaacctccgtgaactagtccaagaacagacgcag
gaccagagatggggaccatttgctgctgggatacttcaggagggtcccacccctcgccaa
ggtaacaagacagacaacgcccatcctcccatccaccccaccaagtacactgacaccctg
ccgggcaatgacttcaaagtctatgagctcattgtccgtcacttcctggcttgctgttcc
aaggacgcccaaggatttgagacgaccgttcaaatcaagatagccagtgaagagttttca
gcccagggcctgatgattgtcgccagaaattacctcgacgtctatccctatgacaaatgg
aatgccaaggtcataccggtgtttgagcaagggcagaccttccggcctagagccattgag
atggctgaaggggagaccagtccaccagctctgttgactgaagccgatctgattgcactt
atggagaaacatggaattggcactgatgcgacccacgccgagcacatcgagaccatcaag
tcccggctctacgtgggcgtcaggcccgacgggaagtttgtgcccggtgagcttggcatg
gggctggtggagggctatgacagcatgggctatgagctatccaagccggacctgagagct
gaactggaagctgacctcaaaaagatctgtgagggtgtcaaggacccagacatagtgcta
cgagaacagatcgagaagtatcgacaggtcttcattgaagcagctgctaacgctaatatg
ttggatgttgctctgtctggatattttggtcagcagcctgaggcatatatcccagaaatc
aatgaggtggctcctgtcacccctatccgctcctgcccaaggtgcggccagcccatggtc
ctcaaagagaagaaggaaggggggtggatggtcagctgtaccggctacccagcatgcaaa
gctgcagtctggttccctgccgccatcctggaggccagtgtgtctgacgaagtctgccag
acttgtaaaccaggacccgtcaagaaaatccaattcaagttcaagagaggatctgtacca
gccatgatgcctacagagtatactggctgtgttggaggatgcgatgccatgttgaaggag
gccctagacctgaacctagcgtacctcagaccagcaactcagccacaagtgccaacaaca
aatgcgaggaatgacaggggaaggggtggtgcccaaagaggagggggaggtggaaacaac
aggggaggaggaaggggaggggcatttgggactggaggggcggggtttggcagtgggagg
aggggggggggagcaaggggagggggcggagccgggtttggagggccgaatcaaagaggc
ggtagaggcttctcttcaaatgctccacagtcaagacctccactgaatcagttgcctgct
ggcgggcagtcgttctttgctggttccggtggcagtggtgacaacgcagtggtgtgtgac
tgtgggaatgatgctttgaagctaactgtcaagaaggaaggccccaataatggacgtcag
ttttataagtgcaatagtggaaactgcaatttcttcctgtgggctgatgagaactcgaca
cccaacgactcctcgagtaaccagagcagcctgggccggaaagctggagagaattcctgg
aatgcccagtattccaccggaaacacctggagtagcggcagcagtgggtatgagtcgggg
aaagactcatcgtctggactgagaacaaacaactggggagaggttatgtgccagtgcgga
caggctgcagtattacgtacagtccagaaagaagggcccaacaaaggtagggacttccac
tgctgtggcaaaccgcagggtaagcagtgcaaattctttgagtgggctgacggtaacaac
aacaacagtggatggggcactggtgctagcagagggggcggagccagacaccaacccaca
tggggcgatggcaggcgaggagggtttggtaagaagggaggagccagctctgggtttgga
gggggtggagatgacaccagaaagaggaagaaaccaaagtgtagtctctgcaatcaagaa
ggtcacaccaagcgcagttgccccatgaaataa
DBGET
integrated database retrieval system
