Acanthaster planci (crown-of-thorns starfish): 110981073
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Entry
110981073 CDS
T05078
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110981073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110981073
03041 Spliceosome [BR:
aplc03041
]
110981073
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110981073
Spliceosome [BR:
aplc03041
]
Complex B
Other components
Prp19-related factors
110981073
Complex C
110981073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
TPR_8
TPR_12
TPR_15
Mad3_BUB1_I
ARM_TT21_C
ARM_TT21
NRDE-2
TPS
Motif
Other DBs
NCBI-GeneID:
110981073
NCBI-ProteinID:
XP_022093988
UniProt:
A0A8B7YL53
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MPILDQPSEVIFEEDDLPYEEEILRNPYAVKCWLRYIEHKSAGSHSALNLIYERALKELP
GSYKLWYNYLKIRRKHVKGRCIIDPGYEDVNNVFERALVFMHKMPRIWLDYCQFLLDQRK
IPRVRRTFDRALRALPISQHHRIWPLYLKFVKLYPLHETAVRVYRRYLKLFPENAEEYIE
YLVSIDRLDEAAVRMADLVNNAAFVSKVGKSNHQLWHDLCNLICKNPTKVTSLKVDPIIR
GGIKRFTDERGKLWCSLADYYIRSGHFEKARDIYEESIQTVTTVRDFTQVFDAYAQFEES
MISAKMDTTAEMGHNEEDDTDLELRLERYEDLMDRRPLLLNSVLLRQNPHNVHEWHKRVN
LFEGKPKDIINTYTEAVQTVDPNKATGKLHTLWVEFAKYYERHGQLPEARLIFEKGTKVL
YVKVDDLGSVWCEWAEMELRHENSDAALILLRRATATPKNKAAYYDKSEPVQNRLYKNLK
VWSMYADLEESFGTFKSTKAVYDRMIDLRIATPQIIINYGMFLEEHSYFEEAFKAYEKGI
SLFKWPNVYDIWNTYLTKFIQRYGGKKLERARDLFEQCLDGCPKKFAKAIFLLYAKMEEN
YGLARHAMAVYERGTEGVLPEEQNEMFNIYIKRAAEVYGVTHTRSIYEKAIEVLPDDQAR
DMCLRFADLERKLGEIDRARAIYAHCSQICDPRTTATFWQTWKEFEIKHGNEDTVREMLR
IKRSVQATYNTQVNFMSAQMLAASKNPAGTVSDLGSGGLDDMKLLEQRAQAMAAEAEADK
PKTKKDILFVRGSAKASDAELAEAARMANPEEINIDDEDEDSGEEVDEVQVETQAVPTEV
FGNIQKE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgcctattttagatcagccatcagaagtcatatttgaggaagatgatcttccctatgaa
gaggagatcttgcggaacccatatgctgtcaagtgctggctgcggtacattgagcacaaa
tcagcaggatctcacagcgccctcaatctcatctatgagagggcactgaaagagctgcct
ggaagttacaaactatggtacaactacttgaagatcagacggaagcatgtcaaaggtcgc
tgcatcattgaccctgggtatgaggatgtcaacaatgtgtttgaaagagctctggtgttt
atgcacaagatgcctcggatatggctggactactgccagttcctcctggaccaacgcaag
atcccgcgagtccggcggacatttgaccgagctctacgggcattgcccatcagccaacat
catcgcatctggcccctctatctcaagtttgtcaagctctatccactgcatgagacagct
gtcagagtgtaccgaagatacttaaaactctttccagagaatgcagaggaatacattgag
tacctggtgtccattgacagattggatgaggctgccgtcagaatggctgaccttgtcaac
aatgcagcattcgtctccaaagttggcaagtccaaccatcagctctggcatgacctgtgt
aacctcatctgcaagaaccctaccaaggtgacgtcgctgaaggtagaccccatcatccgc
ggtggcatcaagcgcttcacagacgagcgggggaaactctggtgctcattggccgattat
tacatcaggagcggccattttgaaaaggccagagacatctatgaggagtccattcagact
gtcacaactgtccgagatttcactcaggtgtttgatgcttatgctcagtttgaggagagc
atgatcagtgctaagatggacactaccgcagaaatgggacacaatgaagaagatgatact
gatctggagctgcgacttgagcgctatgaggatctgatggaccggcgccctctgttgttg
aacagtgtccttctccgtcagaatccacacaacgtccatgagtggcacaaaagggtcaac
ctctttgaaggcaaaccaaaagacataatcaacacatacacagaagcagtccagactgta
gaccccaacaaggctacaggaaaactgcacaccctgtgggtggagtttgccaaatattac
gagagacatggccagctacctgaggcacgtctgatttttgagaaaggcaccaaagtcctg
tatgtcaaggtggatgacttgggatctgtgtggtgtgaatgggctgaaatggagctccgg
catgaaaattctgatgcagcactgattcttctcaggcgagcaacagcaacaccaaagaat
aaagctgcctactatgataagagtgagcccgtccaaaaccggttgtataagaacctgaag
gtgtggtccatgtatgcagatctggaggaaagttttggaaccttcaagagtacaaaagca
gtgtacgaccgtatgatagatctcagaatagccaccccccagatcattatcaactatgga
atgttcctggaagaacacagttactttgaggaagcattcaaggcatatgaaaagggtatt
tctctattcaagtggcctaacgtctatgatatctggaacacttacctcacaaagttcatc
cagagatatggtggtaagaagctggagcgagccagagacctgtttgagcagtgcctagac
ggttgccctaagaaatttgccaaagcaattttcctgttgtatgccaagatggaggagaat
tatggcctagcaagacacgccatggcggtgtatgagagggggacagaaggggtgctacca
gaggagcagaatgagatgttcaacatttacatcaagagagctgccgaggtgtatggtgta
acccacaccaggtccatctatgagaaggccatcgaggtcttgccagatgaccaggctagg
gacatgtgtctgcgatttgctgacctggagagaaagctgggcgagattgaccgcgctcgg
gccatttacgctcactgctcccagatatgtgatccaaggaccactgctactttctggcag
acatggaaagaatttgagatcaagcatgggaatgaagacactgtgcgagagatgctaaga
atcaaacgcagtgtgcaggcaacatacaatacacaggtcaacttcatgtctgcccagatg
ttagctgcatctaagaatcctgccggaacagtgtctgacctaggatcaggtggcttagat
gacatgaaactgctagagcagagagcccaggccatggctgcggaagctgaagctgacaaa
cccaagaccaagaaggacattctgtttgtgcgtgggagtgccaaggctagcgatgctgag
ctggctgaagcagcaaggatggctaacccagaggagatcaacatcgatgatgaggatgaa
gacagcggcgaggaggttgatgaggtgcaagtggagactcaagcagtcccaaccgaggtt
tttggcaacatacaaaaggagtga
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